RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 TRIM61Q5EBN2 209 aa8.06□□□□□ -1.12
UBR1-208ENST00000569066 KCNT2Q6UVM3 1135 aa8.06□□□□□ -1.12
UBR1-208ENST00000569066 A0A087WZG4 1122 aa8.06□□□□□ -1.12
UBR1-208ENST00000569066 ARNTLO00327 626 aa8.06□□□□□ -1.12
UBR1-208ENST00000569066 CYP7A1P22680 504 aa8.06□□□□□ -1.12
UBR1-208ENST00000569066 PLEKHG6Q3KR16 790 aa8.06□□□□□ -1.12
UBR1-208ENST00000569066 SLC35F1Q5T1Q4 408 aa8.06□□□□□ -1.12
UBR1-208ENST00000569066 ZAR1Q86SH2 424 aa8.06□□□□□ -1.12
UBR1-208ENST00000569066 DDX42Q86XP3 938 aaKnown RBP eCLIP8.06□□□□□ -1.12
UBR1-208ENST00000569066 CRACR2BQ8N4Y2 399 aaPredicted RBP8.06□□□□□ -1.12
UBR1-208ENST00000569066 GSTCDQ8NEC7 633 aa8.06□□□□□ -1.12
UBR1-208ENST00000569066 KCTD13Q8WZ19 329 aa8.06□□□□□ -1.12
UBR1-208ENST00000569066 CAAP1Q9H8G2 361 aa8.06□□□□□ -1.12
UBR1-208ENST00000569066 TMEFF2Q9UIK5 374 aaPredicted RBP8.06□□□□□ -1.12
UBR1-208ENST00000569066 DIS3Q9Y2L1 958 aaKnown RBP8.06□□□□□ -1.12
UBR1-208ENST00000569066 MARCH6O60337 910 aa8.05□□□□□ -1.12
UBR1-208ENST00000569066 THBDP07204 575 aa8.05□□□□□ -1.12
UBR1-208ENST00000569066 CT47A1Q5JQC4 288 aaPredicted RBP8.05□□□□□ -1.12
UBR1-208ENST00000569066 FAM83CQ9BQN1 747 aa8.05□□□□□ -1.12
UBR1-208ENST00000569066 C1QTNF9BB2RNN3 333 aa8.05□□□□□ -1.12
UBR1-208ENST00000569066 ITIH2P19823 946 aa8.05□□□□□ -1.12
UBR1-208ENST00000569066 GRB10Q13322 594 aa8.05□□□□□ -1.12
UBR1-208ENST00000569066 PCBP1Q15365 356 aaKnown RBP eCLIP8.05□□□□□ -1.12
UBR1-208ENST00000569066 OGFOD3Q6PK18 319 aa8.05□□□□□ -1.12
UBR1-208ENST00000569066 MFSD4AQ8N468 514 aa8.05□□□□□ -1.12
UBR1-208ENST00000569066 KREMEN2Q8NCW0 462 aa8.05□□□□□ -1.12
UBR1-208ENST00000569066 IRF2BPLQ9H1B7 796 aa8.05□□□□□ -1.12
UBR1-208ENST00000569066 G3BP2Q9UN86 482 aaKnown RBP8.05□□□□□ -1.12
UBR1-208ENST00000569066 CAPN6Q9Y6Q1 641 aa8.05□□□□□ -1.12
UBR1-208ENST00000569066 KPNA6O60684 536 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 CRTAMO95727 393 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 NFKB2Q00653 900 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 CCDC103Q8IW40 242 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 LEO1Q8WVC0 666 aaPredicted RBP8.04□□□□□ -1.12
UBR1-208ENST00000569066 CYP26B1Q9NR63 512 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 ZNF865P0CJ78 1059 aaPredicted RBP8.04□□□□□ -1.12
UBR1-208ENST00000569066 HOXC12P31275 282 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 MAP4K2Q12851 820 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 SEPT7Q16181 437 aaKnown RBP8.04□□□□□ -1.12
UBR1-208ENST00000569066 SKOR2Q2VWA4 1001 aaPredicted RBP8.04□□□□□ -1.12
UBR1-208ENST00000569066 CDKAL1Q5VV42 579 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 PKN3Q6P5Z2 889 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 CLEC10AQ8IUN9 316 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 AFAP1L2Q8N4X5 818 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 COPS5Q92905 334 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 TP53INP1Q96A56 240 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 FCRL3Q96P31 734 aaPredicted RBP8.04□□□□□ -1.12
UBR1-208ENST00000569066 MAGEC2Q9UBF1 373 aaPredicted RBP8.04□□□□□ -1.12
UBR1-208ENST00000569066 KCNH3Q9ULD8 1083 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 PCDHA9Q9Y5H5 950 aa8.04□□□□□ -1.12
UBR1-208ENST00000569066 DNAJC25-GNG10A0A024R161 153 aa8.03□□□□□ -1.12
UBR1-208ENST00000569066 SCG5P05408 212 aa8.03□□□□□ -1.12
UBR1-208ENST00000569066 GABREP78334 506 aa8.03□□□□□ -1.12
UBR1-208ENST00000569066 LHFPL2Q6ZUX7 228 aa8.03□□□□□ -1.12
UBR1-208ENST00000569066 FRS2Q8WU20 508 aa8.03□□□□□ -1.12
UBR1-208ENST00000569066 PTPRN2Q92932 1015 aa8.03□□□□□ -1.12
UBR1-208ENST00000569066 SF3B6Q9Y3B4 125 aaKnown RBP8.03□□□□□ -1.12
UBR1-208ENST00000569066 OPA1O60313 960 aa8.03□□□□□ -1.12
UBR1-208ENST00000569066 PDGFRBP09619 1106 aa8.03□□□□□ -1.12
UBR1-208ENST00000569066 JMJD7P0C870 316 aa8.03□□□□□ -1.12
UBR1-208ENST00000569066 STRN3Q13033 797 aa8.03□□□□□ -1.12
UBR1-208ENST00000569066 ABHD17CQ6PCB6 329 aa8.03□□□□□ -1.12
UBR1-208ENST00000569066 DUSP15Q9H1R2 295 aaPredicted RBP8.03□□□□□ -1.12
UBR1-208ENST00000569066 PARNO95453 639 aaKnown RBP8.02□□□□□ -1.13
UBR1-208ENST00000569066 F13BP05160 661 aa8.02□□□□□ -1.13
UBR1-208ENST00000569066 PPIL6Q8IXY8 311 aa8.02□□□□□ -1.13
UBR1-208ENST00000569066 TCTN2Q96GX1 697 aa8.02□□□□□ -1.13
UBR1-208ENST00000569066 ASCC2Q9H1I8 757 aaPredicted RBP8.02□□□□□ -1.13
UBR1-208ENST00000569066 MSCO60682 206 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 LCP1P13796 627 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 KIR3DL1P43629 444 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 NKPD1Q17RQ9 610 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 CLEC16AQ2KHT3 1053 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 MTFR1LQ9H019 292 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 INTS7Q9NVH2 962 aaKnown RBP8.01□□□□□ -1.13
UBR1-208ENST00000569066 PRR13Q9NZ81 148 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 STOML1Q9UBI4 398 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 PCDHA8Q9Y5H6 950 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 TCRBV16S1A1N1A0A5B0 115 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 C2orf71A6NGG8 1288 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 SRFP11831 508 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 SOX5P35711 763 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 NEK4P51957 841 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 POU4F1Q01851 419 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 CWF19L1Q69YN2 538 aaKnown RBP8.01□□□□□ -1.13
UBR1-208ENST00000569066 FERMT3Q86UX7 667 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 NPLOC4Q8TAT6 608 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 DDX1Q92499 740 aaKnown RBP8.01□□□□□ -1.13
UBR1-208ENST00000569066 DCAF5Q96JK2 942 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 SLC12A9Q9BXP2 914 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 CLEC1BQ9P126 229 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 GTF2IRD1Q9UHL9 959 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 MAPRE3Q9UPY8 281 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 ST14Q9Y5Y6 855 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 BACE2Q9Y5Z0 518 aa8.01□□□□□ -1.13
UBR1-208ENST00000569066 AURKAO14965 403 aa8□□□□□ -1.13
UBR1-208ENST00000569066 MBLAC2Q68D91 279 aa8□□□□□ -1.13
UBR1-208ENST00000569066 STYK1Q6J9G0 422 aa8□□□□□ -1.13
UBR1-208ENST00000569066 RAVER1Q8IY67 606 aaKnown RBP8□□□□□ -1.13
UBR1-208ENST00000569066 PHF20Q9BVI0 1012 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms