RNA–Protein interactions for RNA: ENST00000567165.5

LYRM1-207, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-207ENST00000567165 DDX11Q96FC9 970 aa12.91□□□□□ -0.34
LYRM1-207ENST00000567165 XPNPEP3Q9NQH7 507 aa12.91□□□□□ -0.34
LYRM1-207ENST00000567165 IL17RBQ9NRM6 502 aa12.91□□□□□ -0.34
LYRM1-207ENST00000567165 HOMER2Q9NSB8 354 aa12.91□□□□□ -0.34
LYRM1-207ENST00000567165 SMCHD1A6NHR9 2005 aa12.91□□□□□ -0.34
LYRM1-207ENST00000567165 DNAJC25-GNG10A0A024R161 153 aa12.9□□□□□ -0.34
LYRM1-207ENST00000567165 TMEM232C9JQI7 657 aa12.9□□□□□ -0.34
LYRM1-207ENST00000567165 PGK1P00558 417 aa12.9□□□□□ -0.34
LYRM1-207ENST00000567165 MCCP23508 829 aa12.9□□□□□ -0.34
LYRM1-207ENST00000567165 IKQ13123 557 aaPredicted RBP12.9□□□□□ -0.34
LYRM1-207ENST00000567165 TRIM60Q495X7 471 aa12.9□□□□□ -0.34
LYRM1-207ENST00000567165 B4GALNT3Q6L9W6 998 aa12.9□□□□□ -0.34
LYRM1-207ENST00000567165 ZNF589Q86UQ0 364 aaPredicted RBP12.9□□□□□ -0.34
LYRM1-207ENST00000567165 GMCL1Q96IK5 515 aa12.9□□□□□ -0.34
LYRM1-207ENST00000567165 HELLSQ9NRZ9 838 aa12.9□□□□□ -0.34
LYRM1-207ENST00000567165 NRBP1Q9UHY1 535 aa12.9□□□□□ -0.34
LYRM1-207ENST00000567165 ANAPC4Q9UJX5 808 aa12.9□□□□□ -0.34
LYRM1-207ENST00000567165 STX8Q9UNK0 236 aa12.9□□□□□ -0.34
LYRM1-207ENST00000567165 MTMR7Q9Y216 660 aa12.9□□□□□ -0.34
LYRM1-207ENST00000567165 COL6A3P12111 3177 aa12.89□□□□□ -0.35
LYRM1-207ENST00000567165 LAMA2P24043 3122 aaKnown RBP12.89□□□□□ -0.35
LYRM1-207ENST00000567165 TRIM6-TRIM34B2RNG4 842 aa12.89□□□□□ -0.35
LYRM1-207ENST00000567165 ATMINO43313 823 aaPredicted RBP12.89□□□□□ -0.35
LYRM1-207ENST00000567165 RANBP6O60518 1105 aaKnown RBP12.89□□□□□ -0.35
LYRM1-207ENST00000567165 SNAI1O95863 264 aaPredicted RBP12.89□□□□□ -0.35
LYRM1-207ENST00000567165 IGHDP01880 384 aa12.89□□□□□ -0.35
LYRM1-207ENST00000567165 AKR1A1P14550 325 aa12.89□□□□□ -0.35
LYRM1-207ENST00000567165 SLC1A4P43007 532 aa12.89□□□□□ -0.35
LYRM1-207ENST00000567165 STAT2P52630 851 aa12.89□□□□□ -0.35
LYRM1-207ENST00000567165 OAZ1P54368 228 aa12.89□□□□□ -0.35
LYRM1-207ENST00000567165 SNAP25P60880 206 aa12.89□□□□□ -0.35
LYRM1-207ENST00000567165 NMIQ13287 307 aaPredicted RBP12.89□□□□□ -0.35
LYRM1-207ENST00000567165 MCMDC2Q4G0Z9 681 aa12.89□□□□□ -0.35
LYRM1-207ENST00000567165 KCTD1Q719H9 257 aa12.89□□□□□ -0.35
LYRM1-207ENST00000567165 ANKRD35Q8N283 1001 aa12.89□□□□□ -0.35
LYRM1-207ENST00000567165 FGD4Q96M96 766 aa12.89□□□□□ -0.35
LYRM1-207ENST00000567165 PRDM5Q9NQX1 630 aaPredicted RBP12.89□□□□□ -0.35
LYRM1-207ENST00000567165 ZHX1Q9UKY1 873 aaPredicted RBP12.89□□□□□ -0.35
LYRM1-207ENST00000567165 PHF24Q9UPV7 400 aa12.89□□□□□ -0.35
LYRM1-207ENST00000567165 CNPY2Q9Y2B0 182 aa12.89□□□□□ -0.35
LYRM1-207ENST00000567165 ZNF536O15090 1300 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 TTLL13PA6NNM8 815 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 FGAP02671 866 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 PSEN1P49768 467 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 PDAP1Q13442 181 aaKnown RBP12.88□□□□□ -0.35
LYRM1-207ENST00000567165 SNX17Q15036 470 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 ALX1Q15699 326 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 LRIT3Q3SXY7 679 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 RRP12Q5JTH9 1297 aaKnown RBP12.88□□□□□ -0.35
LYRM1-207ENST00000567165 ASTLQ6HA08 431 aaPredicted RBP12.88□□□□□ -0.35
LYRM1-207ENST00000567165 CCDC174Q6PII3 467 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 MAMDC4Q6UXC1 1216 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 RNF180Q86T96 592 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 FAM160B2Q86V87 743 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 SMC5Q8IY18 1101 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 MSL3Q8N5Y2 521 aaKnown RBP12.88□□□□□ -0.35
LYRM1-207ENST00000567165 EXOC6Q8TAG9 804 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 STAG1Q8WVM7 1258 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 RILPL2Q969X0 211 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 AGBL1Q96MI9 1066 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 LBHD1Q9BQE6 289 aaPredicted RBP12.88□□□□□ -0.35
LYRM1-207ENST00000567165 TOMM22Q9NS69 142 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 PRKAG2Q9UGJ0 569 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 MCM3APO60318 1980 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 SYNRGQ9UMZ2 1314 aa12.88□□□□□ -0.35
LYRM1-207ENST00000567165 A0A1W2PQ45 241 aaPredicted RBP12.87□□□□□ -0.35
LYRM1-207ENST00000567165 A0A1W2PQY0 241 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 ADCY6O43306 1168 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 ORC4O43929 436 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 ADAMTS4O75173 837 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 HSPD1P10809 573 aaKnown RBP12.87□□□□□ -0.35
LYRM1-207ENST00000567165 NOVP48745 357 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 HAND2P61296 217 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 CNTN2Q02246 1040 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 PPP4R3BQ5MIZ7 849 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 Q7L0L9 218 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.87□□□□□ -0.35
LYRM1-207ENST00000567165 SH3RF1Q7Z6J0 888 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 CHST13Q8NET6 341 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 CHURC1Q8WUH1 139 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 RWDD1Q9H446 243 aaPredicted RBP12.87□□□□□ -0.35
LYRM1-207ENST00000567165 PDLIM7Q9NR12 457 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 RNF146Q9NTX7 359 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.87□□□□□ -0.35
LYRM1-207ENST00000567165 FBXO40Q9UH90 709 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 FAM184BQ9ULE4 1060 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 CCDC171Q6TFL3 1326 aa12.87□□□□□ -0.35
LYRM1-207ENST00000567165 LRRC37A2A6NM11 1700 aa12.86□□□□□ -0.35
LYRM1-207ENST00000567165 MYADML2A6NDP7 307 aa12.86□□□□□ -0.35
LYRM1-207ENST00000567165 FGRP09769 529 aa12.86□□□□□ -0.35
LYRM1-207ENST00000567165 IRX5P78411 483 aaPredicted RBP12.86□□□□□ -0.35
LYRM1-207ENST00000567165 NUCB1Q02818 461 aa12.86□□□□□ -0.35
LYRM1-207ENST00000567165 AAMPQ13685 434 aa12.86□□□□□ -0.35
LYRM1-207ENST00000567165 ACVR2BQ13705 512 aa12.86□□□□□ -0.35
LYRM1-207ENST00000567165 CCDC96Q2M329 555 aa12.86□□□□□ -0.35
LYRM1-207ENST00000567165 RCSD1Q6JBY9 416 aa12.86□□□□□ -0.35
LYRM1-207ENST00000567165 CHD1LQ86WJ1 897 aa12.86□□□□□ -0.35
LYRM1-207ENST00000567165 TBC1D10CQ8IV04 446 aa12.86□□□□□ -0.35
LYRM1-207ENST00000567165 PLEKHM2Q8IWE5 1019 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms