RNA–Protein interactions for RNA: ENST00000566269.6

MSLN-206, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-206ENST00000566269 BTNL9Q6UXG8 535 aa20.7■□□□□ 0.9
MSLN-206ENST00000566269 CHST13Q8NET6 341 aa20.7■□□□□ 0.9
MSLN-206ENST00000566269 ANKS1AQ92625 1134 aa20.7■□□□□ 0.9
MSLN-206ENST00000566269 DDX11Q96FC9 970 aa20.7■□□□□ 0.9
MSLN-206ENST00000566269 MAML3Q96JK9 1138 aa20.7■□□□□ 0.9
MSLN-206ENST00000566269 FBXO40Q9UH90 709 aa20.7■□□□□ 0.9
MSLN-206ENST00000566269 ZNF536O15090 1300 aa20.7■□□□□ 0.9
MSLN-206ENST00000566269 ERICH2A1L162 156 aa20.69■□□□□ 0.9
MSLN-206ENST00000566269 IFIT3O14879 490 aaKnown RBP20.69■□□□□ 0.9
MSLN-206ENST00000566269 ALAS1P13196 640 aa20.69■□□□□ 0.9
MSLN-206ENST00000566269 GPATCH4Q5T3I0 446 aaKnown RBP20.69■□□□□ 0.9
MSLN-206ENST00000566269 ANKRD35Q8N283 1001 aa20.69■□□□□ 0.9
MSLN-206ENST00000566269 ACAD9Q9H845 621 aa20.69■□□□□ 0.9
MSLN-206ENST00000566269 RNF146Q9NTX7 359 aa20.69■□□□□ 0.9
MSLN-206ENST00000566269 CCPG1Q9ULG6 757 aa20.69■□□□□ 0.9
MSLN-206ENST00000566269 SLC27A2O14975 620 aa20.68■□□□□ 0.9
MSLN-206ENST00000566269 FARP2O94887 1054 aaPredicted RBP20.68■□□□□ 0.9
MSLN-206ENST00000566269 TAL1P17542 331 aaPredicted RBP20.68■□□□□ 0.9
MSLN-206ENST00000566269 CNGA1P29973 690 aa20.68■□□□□ 0.9
MSLN-206ENST00000566269 SART3Q15020 963 aaKnown RBP20.68■□□□□ 0.9
MSLN-206ENST00000566269 SEC23AQ15436 765 aa20.68■□□□□ 0.9
MSLN-206ENST00000566269 CREB3L3Q68CJ9 461 aa20.68■□□□□ 0.9
MSLN-206ENST00000566269 CHST3Q7LGC8 479 aa20.68■□□□□ 0.9
MSLN-206ENST00000566269 RANBP17Q9H2T7 1088 aaKnown RBP20.68■□□□□ 0.9
MSLN-206ENST00000566269 ICAM1P05362 532 aa20.67■□□□□ 0.9
MSLN-206ENST00000566269 ZNF792Q3KQV3 632 aa20.67■□□□□ 0.9
MSLN-206ENST00000566269 TKFCQ3LXA3 575 aa20.67■□□□□ 0.9
MSLN-206ENST00000566269 ASPRV1Q53RT3 343 aa20.67■□□□□ 0.9
MSLN-206ENST00000566269 MB21D2Q8IYB1 491 aaPredicted RBP20.67■□□□□ 0.9
MSLN-206ENST00000566269 TRERF1Q96PN7 1200 aa20.67■□□□□ 0.9
MSLN-206ENST00000566269 CRISPLD2Q9H0B8 497 aa20.67■□□□□ 0.9
MSLN-206ENST00000566269 CPVLQ9H3G5 476 aa20.67■□□□□ 0.9
MSLN-206ENST00000566269 PARP1P09874 1014 aaKnown RBP20.66■□□□□ 0.9
MSLN-206ENST00000566269 CYBAP13498 195 aa20.66■□□□□ 0.9
MSLN-206ENST00000566269 WTAPQ15007 396 aa20.66■□□□□ 0.9
MSLN-206ENST00000566269 UBA5Q9GZZ9 404 aa20.66■□□□□ 0.9
MSLN-206ENST00000566269 DHX16O60231 1041 aaKnown RBP20.65■□□□□ 0.9
MSLN-206ENST00000566269 IGHA2P01877 340 aa20.65■□□□□ 0.9
MSLN-206ENST00000566269 ANTXR2P58335 489 aa20.65■□□□□ 0.9
MSLN-206ENST00000566269 TMEM67Q5HYA8 995 aa20.65■□□□□ 0.9
MSLN-206ENST00000566269 RNF20Q5VTR2 975 aa20.65■□□□□ 0.9
MSLN-206ENST00000566269 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.65■□□□□ 0.9
MSLN-206ENST00000566269 TRPV1Q8NER1 839 aa20.65■□□□□ 0.9
MSLN-206ENST00000566269 TINF2Q9BSI4 451 aa20.65■□□□□ 0.9
MSLN-206ENST00000566269 DIS3Q9Y2L1 958 aaKnown RBP20.65■□□□□ 0.9
MSLN-206ENST00000566269 FRMPD3Q5JV73 1810 aa20.64■□□□□ 0.9
MSLN-206ENST00000566269 CAPN2P17655 700 aa20.64■□□□□ 0.89
MSLN-206ENST00000566269 NECTIN1Q15223 517 aa20.64■□□□□ 0.89
MSLN-206ENST00000566269 MUM1L1Q5H9M0 696 aa20.64■□□□□ 0.89
MSLN-206ENST00000566269 A1CFQ9NQ94 594 aaKnown RBP20.64■□□□□ 0.89
MSLN-206ENST00000566269 SMCHD1A6NHR9 2005 aa20.64■□□□□ 0.89
MSLN-206ENST00000566269 PFASO15067 1338 aa20.63■□□□□ 0.89
MSLN-206ENST00000566269 DNAJC25-GNG10A0A024R161 153 aa20.63■□□□□ 0.89
MSLN-206ENST00000566269 PRC1O43663 620 aa20.63■□□□□ 0.89
MSLN-206ENST00000566269 PRAMEF19Q5SWL8 479 aa20.63■□□□□ 0.89
MSLN-206ENST00000566269 NSMFQ6X4W1 530 aa20.63■□□□□ 0.89
MSLN-206ENST00000566269 SENP2Q9HC62 589 aa20.63■□□□□ 0.89
MSLN-206ENST00000566269 DDX20Q9UHI6 824 aaKnown RBP20.63■□□□□ 0.89
MSLN-206ENST00000566269 OGDHLQ9ULD0 1010 aa20.63■□□□□ 0.89
MSLN-206ENST00000566269 CEP290O15078 2479 aa20.63■□□□□ 0.89
MSLN-206ENST00000566269 POTEB2H3BUK9 544 aa20.62■□□□□ 0.89
MSLN-206ENST00000566269 MCM5P33992 734 aa20.62■□□□□ 0.89
MSLN-206ENST00000566269 CDC37Q16543 378 aaPredicted RBP20.62■□□□□ 0.89
MSLN-206ENST00000566269 UBE2Q1Q7Z7E8 422 aa20.62■□□□□ 0.89
MSLN-206ENST00000566269 ANKLE1Q8NAG6 615 aa20.62■□□□□ 0.89
MSLN-206ENST00000566269 DIS3LQ8TF46 1054 aaKnown RBP20.62■□□□□ 0.89
MSLN-206ENST00000566269 CNPY2Q9Y2B0 182 aa20.62■□□□□ 0.89
MSLN-206ENST00000566269 WDR19Q8NEZ3 1342 aa20.61■□□□□ 0.89
MSLN-206ENST00000566269 MSCO60682 206 aa20.61■□□□□ 0.89
MSLN-206ENST00000566269 CNTN2Q02246 1040 aa20.61■□□□□ 0.89
MSLN-206ENST00000566269 USH1GQ495M9 461 aa20.61■□□□□ 0.89
MSLN-206ENST00000566269 ANO1Q5XXA6 986 aa20.61■□□□□ 0.89
MSLN-206ENST00000566269 LHX8Q68G74 356 aa20.61■□□□□ 0.89
MSLN-206ENST00000566269 CATIPQ7Z7H3 387 aa20.61■□□□□ 0.89
MSLN-206ENST00000566269 ADGRF4Q8IZF3 695 aa20.61■□□□□ 0.89
MSLN-206ENST00000566269 STAG2Q8N3U4 1231 aa20.61■□□□□ 0.89
MSLN-206ENST00000566269 PAWRQ96IZ0 340 aaKnown RBP20.61■□□□□ 0.89
MSLN-206ENST00000566269 PNMA2Q9UL42 364 aa20.61■□□□□ 0.89
MSLN-206ENST00000566269 MCM3APO60318 1980 aa20.61■□□□□ 0.89
MSLN-206ENST00000566269 MYH6P13533 1939 aa20.61■□□□□ 0.89
MSLN-206ENST00000566269 SYNGAP1Q96PV0 1343 aa20.6■□□□□ 0.89
MSLN-206ENST00000566269 NFIBO00712 420 aa20.6■□□□□ 0.89
MSLN-206ENST00000566269 SEPT4O43236 478 aa20.6■□□□□ 0.89
MSLN-206ENST00000566269 ZNF467Q7Z7K2 595 aaPredicted RBP20.6■□□□□ 0.89
MSLN-206ENST00000566269 MSL3Q8N5Y2 521 aaKnown RBP20.6■□□□□ 0.89
MSLN-206ENST00000566269 IGDCC4Q8TDY8 1250 aa20.6■□□□□ 0.89
MSLN-206ENST00000566269 LY9Q9HBG7 655 aa20.6■□□□□ 0.89
MSLN-206ENST00000566269 VAT1LQ9HCJ6 419 aa20.6■□□□□ 0.89
MSLN-206ENST00000566269 GPHNQ9NQX3 736 aaPredicted RBP20.6■□□□□ 0.89
MSLN-206ENST00000566269 CYP39A1Q9NYL5 469 aa20.6■□□□□ 0.89
MSLN-206ENST00000566269 NRBP1Q9UHY1 535 aa20.6■□□□□ 0.89
MSLN-206ENST00000566269 MAD2L2Q9UI95 211 aa20.6■□□□□ 0.89
MSLN-206ENST00000566269 KLRF2D3W0D1 207 aa20.59■□□□□ 0.89
MSLN-206ENST00000566269 COL9A3Q14050 684 aaPredicted RBP20.59■□□□□ 0.89
MSLN-206ENST00000566269 GRM4Q14833 912 aa20.59■□□□□ 0.89
MSLN-206ENST00000566269 NFXL1Q6ZNB6 911 aa20.59■□□□□ 0.89
MSLN-206ENST00000566269 NECAB2Q7Z6G3 386 aa20.59■□□□□ 0.89
MSLN-206ENST00000566269 FAM133AQ8N9E0 248 aa20.59■□□□□ 0.89
MSLN-206ENST00000566269 NUP133Q8WUM0 1156 aa20.59■□□□□ 0.89
MSLN-206ENST00000566269 FGD4Q96M96 766 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms