RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 RPS6KA3P51812 740 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 TROAPQ12815 778 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 TRIM29Q14134 588 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 EARS2Q5JPH6 523 aaKnown RBP10.3□□□□□ -0.76
TCF4-224ENST00000564403 BRAPQ7Z569 592 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 RBM12BQ8IXT5 1001 aaKnown RBP10.3□□□□□ -0.76
TCF4-224ENST00000564403 C17orf53Q8N3J3 647 aaPredicted RBP10.3□□□□□ -0.76
TCF4-224ENST00000564403 TBC1D16Q8TBP0 767 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 RBM46Q8TBY0 533 aaKnown RBP10.3□□□□□ -0.76
TCF4-224ENST00000564403 TRIM11Q96F44 468 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 FAM163AQ96GL9 167 aaPredicted RBP10.3□□□□□ -0.76
TCF4-224ENST00000564403 SDF4Q9BRK5 362 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 MROH7-TTC4A0A0A0MT08 1334 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 BICDL2A1A5D9 508 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 USP17L3A6NCW0 530 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 USP17L4A6NCW7 530 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 TSPY2A6NKD2 308 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 BOLA2-SMG1P6H3BVE0 249 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 SLC27A3Q5K4L6 730 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 CC2D1AQ6P1N0 951 aaPredicted RBP10.3□□□□□ -0.76
TCF4-224ENST00000564403 USP17L1Q7RTZ2 530 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 IQCA1Q86XH1 822 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 FAM200AQ8TCP9 573 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 MRPS27Q92552 414 aaKnown RBP10.3□□□□□ -0.76
TCF4-224ENST00000564403 UNC45AQ9H3U1 944 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 ZNF219Q9P2Y4 722 aaPredicted RBP10.3□□□□□ -0.76
TCF4-224ENST00000564403 GGA1Q9UJY5 639 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 NOL7Q9UMY1 257 aaKnown RBP10.3□□□□□ -0.76
TCF4-224ENST00000564403 SLURP2P0DP57 97 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 PTPAQ15257 358 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 PKN1Q16512 942 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 SLC5A9Q2M3M2 681 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 SHC4Q6S5L8 630 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 ZNF804AQ7Z570 1209 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 CATIPQ7Z7H3 387 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 SUGP1Q8IWZ8 645 aaKnown RBP10.3□□□□□ -0.76
TCF4-224ENST00000564403 TRIM22Q8IYM9 498 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 DRAXINQ8NBI3 349 aaPredicted RBP10.3□□□□□ -0.76
TCF4-224ENST00000564403 RBM17Q96I25 401 aaKnown RBP10.3□□□□□ -0.76
TCF4-224ENST00000564403 MAP3K14Q99558 947 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 SENP7Q9BQF6 1050 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 CRACR2AQ9BSW2 395 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 PAGR1Q9BTK6 254 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 NACA2Q9H009 215 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 TBC1D7Q9P0N9 293 aa10.3□□□□□ -0.76
TCF4-224ENST00000564403 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.3□□□□□ -0.76
TCF4-224ENST00000564403 MORC2Q9Y6X9 1032 aaPredicted RBP10.3□□□□□ -0.76
TCF4-224ENST00000564403 BRWD3Q6RI45 1802 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 MYO1CO00159 1063 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 WNT7AO00755 349 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 MMP1P03956 469 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 PFKFB1P16118 471 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 GTF2IP78347 998 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 TFAP4Q01664 338 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 SLC39A14Q15043 492 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 DOK7Q18PE1 504 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 MFSD14BQ5SR56 506 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 TRIM42Q8IWZ5 723 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 WDR66Q8TBY9 1149 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 PLEKHG4BQ96PX9 1271 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 IL17RBQ9NRM6 502 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 ATP8A2Q9NTI2 1148 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 MKRN1Q9UHC7 482 aaKnown RBP10.29□□□□□ -0.76
TCF4-224ENST00000564403 PCDHB6Q9Y5E3 794 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.29□□□□□ -0.76
TCF4-224ENST00000564403 NEBLO76041 1014 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 ZNF202O95125 648 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 YEATS4O95619 227 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 FGRP09769 529 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 ZNF24P17028 368 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 FUT2Q10981 343 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 TTC31Q49AM3 519 aaPredicted RBP10.29□□□□□ -0.76
TCF4-224ENST00000564403 HS1BP3Q53T59 392 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 ATL3Q6DD88 541 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 RCSD1Q6JBY9 416 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 NOSTRINQ8IVI9 506 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 EFCAB13Q8IY85 973 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 SRBD1Q8N5C6 995 aaKnown RBP10.29□□□□□ -0.76
TCF4-224ENST00000564403 KCNG4Q8TDN1 519 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 SREK1Q8WXA9 508 aaKnown RBP10.29□□□□□ -0.76
TCF4-224ENST00000564403 CPVLQ9H3G5 476 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 CABP5Q9NP86 173 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 KCNQ5Q9NR82 932 aa10.29□□□□□ -0.76
TCF4-224ENST00000564403 UBR3Q6ZT12 1888 aa10.28□□□□□ -0.76
TCF4-224ENST00000564403 BTDP43251 543 aa10.28□□□□□ -0.76
TCF4-224ENST00000564403 C12orf60Q5U649 245 aa10.28□□□□□ -0.76
TCF4-224ENST00000564403 ARIH1Q9Y4X5 557 aaPredicted RBP10.28□□□□□ -0.76
TCF4-224ENST00000564403 DEXIO95424 95 aa10.28□□□□□ -0.76
TCF4-224ENST00000564403 MMP10P09238 476 aa10.28□□□□□ -0.76
TCF4-224ENST00000564403 USP49Q70CQ1 688 aa10.28□□□□□ -0.76
TCF4-224ENST00000564403 IFNLR1Q8IU57 520 aaPredicted RBP10.28□□□□□ -0.76
TCF4-224ENST00000564403 DHRS1Q96LJ7 313 aa10.28□□□□□ -0.76
TCF4-224ENST00000564403 RTFDC1Q9BY42 306 aaPredicted RBP10.28□□□□□ -0.76
TCF4-224ENST00000564403 ZKSCAN5Q9Y2L8 839 aa10.28□□□□□ -0.76
TCF4-224ENST00000564403 MYH15Q9Y2K3 1946 aa10.28□□□□□ -0.76
TCF4-224ENST00000564403 FOXN1O15353 648 aa10.27□□□□□ -0.77
TCF4-224ENST00000564403 BBOX1O75936 387 aa10.27□□□□□ -0.77
TCF4-224ENST00000564403 SESN3P58005 492 aa10.27□□□□□ -0.77
TCF4-224ENST00000564403 DPCR1Q3MIW9 517 aa10.27□□□□□ -0.77
TCF4-224ENST00000564403 PREPLQ4J6C6 727 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms