RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 AGBL1Q96MI9 1066 aa20.23■□□□□ 0.83
USB1-209ENST00000564387 CWC22Q9HCG8 908 aaKnown RBP20.23■□□□□ 0.83
USB1-209ENST00000564387 MAD2L2Q9UI95 211 aa20.23■□□□□ 0.83
USB1-209ENST00000564387 ISY1Q9ULR0 285 aaKnown RBP20.23■□□□□ 0.83
USB1-209ENST00000564387 SNX14Q9Y5W7 946 aa20.23■□□□□ 0.83
USB1-209ENST00000564387 ZNFX1Q9P2E3 1918 aaKnown RBP20.23■□□□□ 0.83
USB1-209ENST00000564387 DNAJC25-GNG10A0A024R161 153 aa20.22■□□□□ 0.83
USB1-209ENST00000564387 INHAP05111 366 aa20.22■□□□□ 0.83
USB1-209ENST00000564387 HMGB1P09429 215 aaKnown RBP20.22■□□□□ 0.83
USB1-209ENST00000564387 UBXN2AP68543 259 aa20.22■□□□□ 0.83
USB1-209ENST00000564387 GRM4Q14833 912 aa20.22■□□□□ 0.83
USB1-209ENST00000564387 GPHNQ9NQX3 736 aaPredicted RBP20.22■□□□□ 0.83
USB1-209ENST00000564387 FBXO40Q9UH90 709 aa20.22■□□□□ 0.83
USB1-209ENST00000564387 PNMA2Q9UL42 364 aa20.22■□□□□ 0.83
USB1-209ENST00000564387 DIS3Q9Y2L1 958 aaKnown RBP20.22■□□□□ 0.83
USB1-209ENST00000564387 CTDP1Q9Y5B0 961 aaPredicted RBP20.22■□□□□ 0.83
USB1-209ENST00000564387 MTFR1Q15390 333 aa20.21■□□□□ 0.83
USB1-209ENST00000564387 CCL14Q16627 93 aa20.21■□□□□ 0.83
USB1-209ENST00000564387 OLFML2BQ68BL8 750 aa20.21■□□□□ 0.83
USB1-209ENST00000564387 STAG2Q8N3U4 1231 aa20.21■□□□□ 0.83
USB1-209ENST00000564387 MTMR8Q96EF0 704 aa20.21■□□□□ 0.83
USB1-209ENST00000564387 MMP19Q99542 508 aa20.21■□□□□ 0.83
USB1-209ENST00000564387 FLRT1Q9NZU1 646 aa20.21■□□□□ 0.83
USB1-209ENST00000564387 SNAP25P60880 206 aa20.2■□□□□ 0.82
USB1-209ENST00000564387 KCTD2Q14681 263 aa20.2■□□□□ 0.82
USB1-209ENST00000564387 ZNF792Q3KQV3 632 aa20.2■□□□□ 0.82
USB1-209ENST00000564387 CATIPQ7Z7H3 387 aa20.2■□□□□ 0.82
USB1-209ENST00000564387 DPP9Q86TI2 863 aa20.2■□□□□ 0.82
USB1-209ENST00000564387 ADGRF4Q8IZF3 695 aa20.2■□□□□ 0.82
USB1-209ENST00000564387 FBXL16Q8N461 479 aa20.2■□□□□ 0.82
USB1-209ENST00000564387 UBA5Q9GZZ9 404 aa20.2■□□□□ 0.82
USB1-209ENST00000564387 CPVLQ9H3G5 476 aa20.2■□□□□ 0.82
USB1-209ENST00000564387 SLC5A4Q9NY91 659 aa20.2■□□□□ 0.82
USB1-209ENST00000564387 KLRF2D3W0D1 207 aa20.19■□□□□ 0.82
USB1-209ENST00000564387 DDAH1O94760 285 aa20.19■□□□□ 0.82
USB1-209ENST00000564387 CCL5P13501 91 aa20.19■□□□□ 0.82
USB1-209ENST00000564387 SLC35G1Q2M3R5 365 aa20.19■□□□□ 0.82
USB1-209ENST00000564387 CCDC174Q6PII3 467 aa20.19■□□□□ 0.82
USB1-209ENST00000564387 ZNF654Q8IZM8 581 aa20.19■□□□□ 0.82
USB1-209ENST00000564387 RIOX1Q9H6W3 641 aa20.19■□□□□ 0.82
USB1-209ENST00000564387 JMJD4Q9H9V9 463 aa20.19■□□□□ 0.82
USB1-209ENST00000564387 PAK6Q9NQU5 681 aaPredicted RBP20.19■□□□□ 0.82
USB1-209ENST00000564387 SMCHD1A6NHR9 2005 aa20.19■□□□□ 0.82
USB1-209ENST00000564387 GJB1P08034 283 aa20.18■□□□□ 0.82
USB1-209ENST00000564387 TRIM32Q13049 653 aa20.18■□□□□ 0.82
USB1-209ENST00000564387 MAML3Q96JK9 1138 aa20.18■□□□□ 0.82
USB1-209ENST00000564387 TRERF1Q96PN7 1200 aa20.18■□□□□ 0.82
USB1-209ENST00000564387 UNC93B1Q9H1C4 597 aa20.18■□□□□ 0.82
USB1-209ENST00000564387 ACAD9Q9H845 621 aa20.18■□□□□ 0.82
USB1-209ENST00000564387 RNF146Q9NTX7 359 aa20.18■□□□□ 0.82
USB1-209ENST00000564387 BIN2Q9UBW5 565 aaPredicted RBP20.18■□□□□ 0.82
USB1-209ENST00000564387 CCPG1Q9ULG6 757 aa20.18■□□□□ 0.82
USB1-209ENST00000564387 RPTORQ8N122 1335 aa20.18■□□□□ 0.82
USB1-209ENST00000564387 KIAA0100Q14667 2235 aaKnown RBP20.18■□□□□ 0.82
USB1-209ENST00000564387 POTEFA5A3E0 1075 aa20.17■□□□□ 0.82
USB1-209ENST00000564387 EIF5BO60841 1220 aaKnown RBP20.17■□□□□ 0.82
USB1-209ENST00000564387 CAPN15O75808 1086 aa20.17■□□□□ 0.82
USB1-209ENST00000564387 CAPN2P17655 700 aa20.17■□□□□ 0.82
USB1-209ENST00000564387 SMARCA1P28370 1054 aa20.17■□□□□ 0.82
USB1-209ENST00000564387 CACNB2Q08289 660 aaPredicted RBP20.17■□□□□ 0.82
USB1-209ENST00000564387 MUM1L1Q5H9M0 696 aa20.17■□□□□ 0.82
USB1-209ENST00000564387 IL17RAQ96F46 866 aa20.17■□□□□ 0.82
USB1-209ENST00000564387 TMEM106CQ9BVX2 250 aa20.17■□□□□ 0.82
USB1-209ENST00000564387 LRRC2Q9BYS8 371 aa20.17■□□□□ 0.82
USB1-209ENST00000564387 AGXT2Q9BYV1 514 aa20.17■□□□□ 0.82
USB1-209ENST00000564387 MAF1Q9H063 256 aa20.17■□□□□ 0.82
USB1-209ENST00000564387 PLXNA1Q9UIW2 1896 aa20.16■□□□□ 0.82
USB1-209ENST00000564387 PGK2P07205 417 aa20.16■□□□□ 0.82
USB1-209ENST00000564387 CALM1P0DP23 149 aa20.16■□□□□ 0.82
USB1-209ENST00000564387 CALM2P0DP24 149 aa20.16■□□□□ 0.82
USB1-209ENST00000564387 CALM3P0DP25 149 aa20.16■□□□□ 0.82
USB1-209ENST00000564387 ALAS1P13196 640 aa20.16■□□□□ 0.82
USB1-209ENST00000564387 SOX10P56693 466 aa20.16■□□□□ 0.82
USB1-209ENST00000564387 CDC37Q16543 378 aaPredicted RBP20.16■□□□□ 0.82
USB1-209ENST00000564387 MAMDC4Q6UXC1 1216 aa20.16■□□□□ 0.82
USB1-209ENST00000564387 ZNF467Q7Z7K2 595 aaPredicted RBP20.16■□□□□ 0.82
USB1-209ENST00000564387 MSL3Q8N5Y2 521 aaKnown RBP20.16■□□□□ 0.82
USB1-209ENST00000564387 CLEC4DQ8WXI8 215 aa20.16■□□□□ 0.82
USB1-209ENST00000564387 FGD4Q96M96 766 aa20.16■□□□□ 0.82
USB1-209ENST00000564387 JAKMIP1Q96N16 626 aaKnown RBP20.16■□□□□ 0.82
USB1-209ENST00000564387 TM6SF1Q9BZW5 370 aa20.16■□□□□ 0.82
USB1-209ENST00000564387 RNF208Q9H0X6 261 aa20.16■□□□□ 0.82
USB1-209ENST00000564387 A1CFQ9NQ94 594 aaKnown RBP20.16■□□□□ 0.82
USB1-209ENST00000564387 CCDC69A6NI79 296 aa20.15■□□□□ 0.82
USB1-209ENST00000564387 CYTH3O43739 400 aa20.15■□□□□ 0.82
USB1-209ENST00000564387 PRKAR2AP13861 404 aaKnown RBP20.15■□□□□ 0.82
USB1-209ENST00000564387 PSMA5P28066 241 aa20.15■□□□□ 0.82
USB1-209ENST00000564387 GJA8P48165 433 aa20.15■□□□□ 0.82
USB1-209ENST00000564387 MFSD14CQ5VZR4 134 aa20.15■□□□□ 0.82
USB1-209ENST00000564387 ANKRD35Q8N283 1001 aa20.15■□□□□ 0.82
USB1-209ENST00000564387 FAM133AQ8N9E0 248 aa20.15■□□□□ 0.82
USB1-209ENST00000564387 RGS22Q8NE09 1264 aa20.15■□□□□ 0.82
USB1-209ENST00000564387 DDX11Q96FC9 970 aa20.15■□□□□ 0.82
USB1-209ENST00000564387 ZSWIM6Q9HCJ5 1215 aa20.15■□□□□ 0.82
USB1-209ENST00000564387 HOMER2Q9NSB8 354 aa20.15■□□□□ 0.82
USB1-209ENST00000564387 PFASO15067 1338 aa20.15■□□□□ 0.82
USB1-209ENST00000564387 RPS6KB1P23443 525 aa20.14■□□□□ 0.81
USB1-209ENST00000564387 KIF5BP33176 963 aa20.14■□□□□ 0.81
USB1-209ENST00000564387 SLC4A3P48751 1232 aa20.14■□□□□ 0.81
USB1-209ENST00000564387 RCAN1P53805 252 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms