RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 KAT14Q9H8E8 782 aa33.2■■■□□ 2.91
NME3-203ENST00000563367 SEC23AQ15436 765 aa33.19■■■□□ 2.9
NME3-203ENST00000563367 CHST13Q8NET6 341 aa33.19■■■□□ 2.9
NME3-203ENST00000563367 RANBP17Q9H2T7 1088 aaKnown RBP33.19■■■□□ 2.9
NME3-203ENST00000563367 HOMER2Q9NSB8 354 aa33.19■■■□□ 2.9
NME3-203ENST00000563367 GOLGA8HP0CJ92 632 aa33.18■■■□□ 2.9
NME3-203ENST00000563367 DHX30Q7L2E3 1194 aaKnown RBP eCLIP33.18■■■□□ 2.9
NME3-203ENST00000563367 ANO2Q9NQ90 1003 aa33.18■■■□□ 2.9
NME3-203ENST00000563367 PPP4R2Q9NY27 417 aa33.18■■■□□ 2.9
NME3-203ENST00000563367 MCM3APO60318 1980 aa33.18■■■□□ 2.9
NME3-203ENST00000563367 DNAJC25-GNG10A0A024R161 153 aa33.17■■■□□ 2.9
NME3-203ENST00000563367 CDC45O75419 566 aa33.17■■■□□ 2.9
NME3-203ENST00000563367 TAL1P17542 331 aaPredicted RBP33.17■■■□□ 2.9
NME3-203ENST00000563367 NCOA7Q8NI08 942 aa33.17■■■□□ 2.9
NME3-203ENST00000563367 DIS3Q9Y2L1 958 aaKnown RBP33.17■■■□□ 2.9
NME3-203ENST00000563367 FARP2O94887 1054 aaPredicted RBP33.16■■■□□ 2.9
NME3-203ENST00000563367 CYBAP13498 195 aa33.16■■■□□ 2.9
NME3-203ENST00000563367 IFIT1BQ5T764 474 aaKnown RBP33.16■■■□□ 2.9
NME3-203ENST00000563367 LHX8Q68G74 356 aa33.16■■■□□ 2.9
NME3-203ENST00000563367 DDX11Q96FC9 970 aa33.16■■■□□ 2.9
NME3-203ENST00000563367 RNF146Q9NTX7 359 aa33.16■■■□□ 2.9
NME3-203ENST00000563367 FBXO40Q9UH90 709 aa33.16■■■□□ 2.9
NME3-203ENST00000563367 ALAS1P13196 640 aa33.15■■■□□ 2.9
NME3-203ENST00000563367 CAPN2P17655 700 aa33.15■■■□□ 2.9
NME3-203ENST00000563367 PRAMEF19Q5SWL8 479 aa33.15■■■□□ 2.9
NME3-203ENST00000563367 ERICH6BQ5W0A0 696 aa33.15■■■□□ 2.9
NME3-203ENST00000563367 RALYLQ86SE5 291 aaKnown RBP33.15■■■□□ 2.9
NME3-203ENST00000563367 CPVLQ9H3G5 476 aa33.15■■■□□ 2.9
NME3-203ENST00000563367 OGDHLQ9ULD0 1010 aa33.15■■■□□ 2.9
NME3-203ENST00000563367 MYH6P13533 1939 aa33.14■■■□□ 2.9
NME3-203ENST00000563367 SLC27A2O14975 620 aa33.14■■■□□ 2.9
NME3-203ENST00000563367 NECTIN1Q15223 517 aa33.14■■■□□ 2.9
NME3-203ENST00000563367 GPATCH4Q5T3I0 446 aaKnown RBP33.14■■■□□ 2.9
NME3-203ENST00000563367 CHST3Q7LGC8 479 aa33.14■■■□□ 2.9
NME3-203ENST00000563367 ANKRD35Q8N283 1001 aa33.14■■■□□ 2.9
NME3-203ENST00000563367 TRERF1Q96PN7 1200 aa33.14■■■□□ 2.9
NME3-203ENST00000563367 ACAD9Q9H845 621 aa33.14■■■□□ 2.9
NME3-203ENST00000563367 CCPG1Q9ULG6 757 aa33.14■■■□□ 2.9
NME3-203ENST00000563367 ICAM1P05362 532 aa33.13■■■□□ 2.89
NME3-203ENST00000563367 CNGA1P29973 690 aa33.13■■■□□ 2.89
NME3-203ENST00000563367 TKFCQ3LXA3 575 aa33.13■■■□□ 2.89
NME3-203ENST00000563367 MB21D2Q8IYB1 491 aaPredicted RBP33.13■■■□□ 2.89
NME3-203ENST00000563367 DIS3LQ8TF46 1054 aaKnown RBP33.13■■■□□ 2.89
NME3-203ENST00000563367 UBA5Q9GZZ9 404 aa33.13■■■□□ 2.89
NME3-203ENST00000563367 SENP2Q9HC62 589 aa33.13■■■□□ 2.89
NME3-203ENST00000563367 MNX1P50219 401 aaPredicted RBP33.12■■■□□ 2.89
NME3-203ENST00000563367 ANTXR2P58335 489 aa33.12■■■□□ 2.89
NME3-203ENST00000563367 MUM1L1Q5H9M0 696 aa33.12■■■□□ 2.89
NME3-203ENST00000563367 CREB3L3Q68CJ9 461 aa33.12■■■□□ 2.89
NME3-203ENST00000563367 CASC1Q6TDU7 716 aa33.12■■■□□ 2.89
NME3-203ENST00000563367 TINF2Q9BSI4 451 aa33.12■■■□□ 2.89
NME3-203ENST00000563367 LCTP09848 1927 aa33.12■■■□□ 2.89
NME3-203ENST00000563367 IFIT3O14879 490 aaKnown RBP33.11■■■□□ 2.89
NME3-203ENST00000563367 FGD4Q96M96 766 aa33.11■■■□□ 2.89
NME3-203ENST00000563367 A1CFQ9NQ94 594 aaKnown RBP33.11■■■□□ 2.89
NME3-203ENST00000563367 DDX20Q9UHI6 824 aaKnown RBP33.11■■■□□ 2.89
NME3-203ENST00000563367 COL9A3Q14050 684 aaPredicted RBP33.1■■■□□ 2.89
NME3-203ENST00000563367 ASPRV1Q53RT3 343 aa33.1■■■□□ 2.89
NME3-203ENST00000563367 ANKLE1Q8NAG6 615 aa33.1■■■□□ 2.89
NME3-203ENST00000563367 PAWRQ96IZ0 340 aaKnown RBP33.1■■■□□ 2.89
NME3-203ENST00000563367 PARP1P09874 1014 aaKnown RBP33.09■■■□□ 2.89
NME3-203ENST00000563367 ALPK3Q96L96 1907 aa33.08■■■□□ 2.89
NME3-203ENST00000563367 CNTN2Q02246 1040 aa33.08■■■□□ 2.89
NME3-203ENST00000563367 WTAPQ15007 396 aa33.07■■■□□ 2.88
NME3-203ENST00000563367 STAG2Q8N3U4 1231 aa33.07■■■□□ 2.88
NME3-203ENST00000563367 FAM133AQ8N9E0 248 aa33.07■■■□□ 2.88
NME3-203ENST00000563367 IGDCC4Q8TDY8 1250 aa33.07■■■□□ 2.88
NME3-203ENST00000563367 ERICH2A1L162 156 aa33.06■■■□□ 2.88
NME3-203ENST00000563367 TMEM67Q5HYA8 995 aa33.06■■■□□ 2.88
NME3-203ENST00000563367 MAMDC4Q6UXC1 1216 aa33.06■■■□□ 2.88
NME3-203ENST00000563367 ZNF467Q7Z7K2 595 aaPredicted RBP33.06■■■□□ 2.88
NME3-203ENST00000563367 ADGRF4Q8IZF3 695 aa33.06■■■□□ 2.88
NME3-203ENST00000563367 BAZ2BQ9UIF8 2168 aaKnown RBP33.06■■■□□ 2.88
NME3-203ENST00000563367 SEPT4O43236 478 aa33.05■■■□□ 2.88
NME3-203ENST00000563367 MSCO60682 206 aa33.05■■■□□ 2.88
NME3-203ENST00000563367 SNAI1O95863 264 aaPredicted RBP33.05■■■□□ 2.88
NME3-203ENST00000563367 SART3Q15020 963 aaKnown RBP33.05■■■□□ 2.88
NME3-203ENST00000563367 ANO1Q5XXA6 986 aa33.05■■■□□ 2.88
NME3-203ENST00000563367 NECAB2Q7Z6G3 386 aa33.05■■■□□ 2.88
NME3-203ENST00000563367 MSL3Q8N5Y2 521 aaKnown RBP33.05■■■□□ 2.88
NME3-203ENST00000563367 GPHNQ9NQX3 736 aaPredicted RBP33.05■■■□□ 2.88
NME3-203ENST00000563367 NRBP1Q9UHY1 535 aa33.05■■■□□ 2.88
NME3-203ENST00000563367 POTEB2H3BUK9 544 aa33.04■■■□□ 2.88
NME3-203ENST00000563367 CYP39A1Q9NYL5 469 aa33.04■■■□□ 2.88
NME3-203ENST00000563367 MAD2L2Q9UI95 211 aa33.04■■■□□ 2.88
NME3-203ENST00000563367 PFASO15067 1338 aa33.03■■■□□ 2.88
NME3-203ENST00000563367 WDR19Q8NEZ3 1342 aa33.03■■■□□ 2.88
NME3-203ENST00000563367 SYNGAP1Q96PV0 1343 aa33.03■■■□□ 2.88
NME3-203ENST00000563367 NFIBO00712 420 aa33.03■■■□□ 2.88
NME3-203ENST00000563367 PRC1O43663 620 aa33.03■■■□□ 2.88
NME3-203ENST00000563367 ZNF865P0CJ78 1059 aaPredicted RBP33.03■■■□□ 2.88
NME3-203ENST00000563367 NSMFQ6X4W1 530 aa33.03■■■□□ 2.88
NME3-203ENST00000563367 CLEC4DQ8WXI8 215 aa33.03■■■□□ 2.88
NME3-203ENST00000563367 PALM3A6NDB9 673 aaPredicted RBP33.02■■■□□ 2.88
NME3-203ENST00000563367 SOWAHBA6NEL2 793 aa33.02■■■□□ 2.88
NME3-203ENST00000563367 CDC37Q16543 378 aaPredicted RBP33.02■■■□□ 2.88
NME3-203ENST00000563367 JMJD4Q9H9V9 463 aa33.02■■■□□ 2.88
NME3-203ENST00000563367 LY9Q9HBG7 655 aa33.02■■■□□ 2.88
NME3-203ENST00000563367 VAT1LQ9HCJ6 419 aa33.02■■■□□ 2.88
NME3-203ENST00000563367 ASTN1O14525 1302 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms