RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 WNT10BO00744 389 aa11.17□□□□□ -0.62
UBFD1-202ENST00000563366 AKR1B1P15121 316 aa11.17□□□□□ -0.62
UBFD1-202ENST00000563366 U2AF2P26368 475 aaKnown RBP eCLIP11.17□□□□□ -0.624e-7■□□□□ 8.2
UBFD1-202ENST00000563366 CALML3P27482 149 aa11.17□□□□□ -0.62
UBFD1-202ENST00000563366 GUCY1B3Q02153 619 aa11.17□□□□□ -0.62
UBFD1-202ENST00000563366 FOXD4L6Q3SYB3 417 aaPredicted RBP11.17□□□□□ -0.62
UBFD1-202ENST00000563366 MORN1Q5T089 497 aa11.17□□□□□ -0.62
UBFD1-202ENST00000563366 FOXD4L3Q6VB84 417 aaPredicted RBP11.17□□□□□ -0.62
UBFD1-202ENST00000563366 GPC2Q8N158 579 aa11.17□□□□□ -0.62
UBFD1-202ENST00000563366 CCDC12Q8WUD4 166 aaPredicted RBP11.17□□□□□ -0.62
UBFD1-202ENST00000563366 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.17□□□□□ -0.62
UBFD1-202ENST00000563366 VEZTQ9HBM0 779 aa11.17□□□□□ -0.62
UBFD1-202ENST00000563366 NYAP2Q9P242 653 aa11.17□□□□□ -0.62
UBFD1-202ENST00000563366 PCDHAC2Q9Y5I4 1007 aa11.17□□□□□ -0.62
UBFD1-202ENST00000563366 CLRN2A0PK11 232 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 PALM3A6NDB9 673 aaPredicted RBP11.16□□□□□ -0.62
UBFD1-202ENST00000563366 TCP10L2B9ZVM9 353 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 KLRF2D3W0D1 207 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 RAD21O60216 631 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 DTNBO60941 627 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 PPFIA3O75145 1194 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 PLEKHA8P1O95397 391 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 YEATS4O95619 227 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 SCG2P13521 617 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 GMPSP49915 693 aaPredicted RBP11.16□□□□□ -0.62
UBFD1-202ENST00000563366 PFKFB3Q16875 520 aaPredicted RBP11.16□□□□□ -0.62
UBFD1-202ENST00000563366 ABCB5Q2M3G0 1257 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 RILPL1Q5EBL4 403 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 GALNT17Q6IS24 598 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 ARHGAP27Q6ZUM4 889 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 SH3BP5LQ7L8J4 393 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 NOSTRINQ8IVI9 506 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 CCDC82Q8N4S0 544 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 SRBD1Q8N5C6 995 aaKnown RBP11.16□□□□□ -0.62
UBFD1-202ENST00000563366 JMYQ8N9B5 988 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 KCNG4Q8TDN1 519 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 MKL1Q969V6 931 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 DNAJC18Q9H819 358 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 GINM1Q9NU53 330 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 SEC63Q9UGP8 760 aaKnown RBP11.16□□□□□ -0.62
UBFD1-202ENST00000563366 MAD2L2Q9UI95 211 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 GJA3Q9Y6H8 435 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 V9GY48 417 aaPredicted RBP11.16□□□□□ -0.62
UBFD1-202ENST00000563366 CNTNAP1P78357 1384 aa11.16□□□□□ -0.62
UBFD1-202ENST00000563366 A6NJR5 290 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 LETM1O95202 739 aaPredicted RBP11.15□□□□□ -0.62
UBFD1-202ENST00000563366 SNHG28P0DPA3 235 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 PDHBP11177 359 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 KRT2P35908 639 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 APLP1P51693 650 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 ICA1Q05084 483 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 APOBEC3FQ8IUX4 373 aaKnown RBP11.15□□□□□ -0.62
UBFD1-202ENST00000563366 ZFPM1Q8IX07 1006 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 DIS3L2Q8IYB7 885 aaKnown RBP11.15□□□□□ -0.62
UBFD1-202ENST00000563366 LEO1Q8WVC0 666 aaPredicted RBP11.15□□□□□ -0.62
UBFD1-202ENST00000563366 RRP36Q96EU6 259 aaKnown RBP11.15□□□□□ -0.62
UBFD1-202ENST00000563366 SYT17Q9BSW7 474 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 PHF20Q9BVI0 1012 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 SH2D4AQ9H788 454 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 GDPD2Q9HCC8 539 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 ARHGEF10LQ9HCE6 1279 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 RTEL1Q9NZ71 1219 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 CLIP2Q9UDT6 1046 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 CNOT7Q9UIV1 285 aaKnown RBP11.15□□□□□ -0.62
UBFD1-202ENST00000563366 RCOR1Q9UKL0 485 aa11.15□□□□□ -0.62
UBFD1-202ENST00000563366 NASPP49321 788 aaPredicted RBP11.14□□□□□ -0.63
UBFD1-202ENST00000563366 PKN1Q16512 942 aa11.14□□□□□ -0.63
UBFD1-202ENST00000563366 KIF4BQ2VIQ3 1234 aa11.14□□□□□ -0.63
UBFD1-202ENST00000563366 Q3C1V9 767 aa11.14□□□□□ -0.63
UBFD1-202ENST00000563366 CAVIN1Q6NZI2 390 aaKnown RBP11.14□□□□□ -0.63
UBFD1-202ENST00000563366 FAM173BQ6P4H8 233 aa11.14□□□□□ -0.63
UBFD1-202ENST00000563366 CMTR1Q8N1G2 835 aaKnown RBP11.14□□□□□ -0.63
UBFD1-202ENST00000563366 DCAF4Q8WV16 495 aa11.14□□□□□ -0.63
UBFD1-202ENST00000563366 TSC1Q92574 1164 aa11.14□□□□□ -0.63
UBFD1-202ENST00000563366 AIFM3Q96NN9 605 aa11.14□□□□□ -0.63
UBFD1-202ENST00000563366 NOL7Q9UMY1 257 aaKnown RBP11.14□□□□□ -0.63
UBFD1-202ENST00000563366 CEP131Q9UPN4 1083 aa11.14□□□□□ -0.63
UBFD1-202ENST00000563366 SLC27A5Q9Y2P5 690 aa11.14□□□□□ -0.63
UBFD1-202ENST00000563366 PPP2R3BQ9Y5P8 575 aa11.14□□□□□ -0.63
UBFD1-202ENST00000563366 ZC3H4Q9UPT8 1303 aaKnown RBP11.13□□□□□ -0.63
UBFD1-202ENST00000563366 DOCK1Q14185 1865 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 BMP15O95972 392 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 GUCY1A2P33402 732 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 NLRP5P59047 1200 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 ZNF543Q08ER8 600 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 STK38Q15208 465 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 SF3A1Q15459 793 aaKnown RBP11.13□□□□□ -0.63
UBFD1-202ENST00000563366 NBPF9Q3BBW0 867 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 DCAF15Q66K64 600 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 OTUD7BQ6GQQ9 843 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 POTEGQ6S5H5 508 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 CDAN1Q8IWY9 1227 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 LRRC47Q8N1G4 583 aaKnown RBP11.13□□□□□ -0.63
UBFD1-202ENST00000563366 STAG2Q8N3U4 1231 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 GMCL1P1Q8NEA9 526 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 GPT2Q8TD30 523 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 USP28Q96RU2 1077 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 GPRC5DQ9NZD1 345 aa11.13□□□□□ -0.63
UBFD1-202ENST00000563366 TFIP11Q9UBB9 837 aaKnown RBP11.13□□□□□ -0.63
UBFD1-202ENST00000563366 PCDHB3Q9Y5E6 796 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms