RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 DOCK2Q92608 1830 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 CICQ96RK0 1608 aaPredicted RBP8.47□□□□□ -1.05
CFDP1-202ENST00000562602 BCL9LQ86UU0 1499 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 PHLPP1O60346 1717 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 CCDC66A2RUB6 948 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 LRRC10BA6NIK2 292 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 MINDY4BA8MYZ0 360 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 PRKAB2O43741 272 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 KIF5CO60282 957 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 URI1O94763 535 aaPredicted RBP8.47□□□□□ -1.05
CFDP1-202ENST00000562602 ATP2C1P98194 919 aaPredicted RBP8.47□□□□□ -1.05
CFDP1-202ENST00000562602 ORC2Q13416 577 aaPredicted RBP8.47□□□□□ -1.05
CFDP1-202ENST00000562602 STIM1Q13586 685 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 ELF2Q15723 593 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 TTC38Q5R3I4 469 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 TRIM65Q6PJ69 517 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 FBXO33Q7Z6M2 555 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 DGKHQ86XP1 1220 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 CRIPAKQ8N1N5 446 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 CEP112Q8N8E3 955 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 ENAHQ8N8S7 591 aaPredicted RBP8.47□□□□□ -1.05
CFDP1-202ENST00000562602 ANKS1AQ92625 1134 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 RABGGTAQ92696 567 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 CCDC47Q96A33 483 aaKnown RBP8.47□□□□□ -1.05
CFDP1-202ENST00000562602 PAGE5Q96GU1 130 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 MYL10Q9BUA6 226 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 CUEDC2Q9H467 287 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 RWDD2AQ9UIY3 292 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 KCNJ14Q9UNX9 436 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 PCDHB6Q9Y5E3 794 aa8.47□□□□□ -1.05
CFDP1-202ENST00000562602 V9GYY5 206 aaPredicted RBP8.47□□□□□ -1.05
CFDP1-202ENST00000562602 H7C1D1 291 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 TADA3O75528 432 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 ZMYND10O75800 440 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 SCG2P13521 617 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 BMP6P22004 513 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 GUCY1A2P33402 732 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 GNG11P61952 73 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 GSTO1P78417 241 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 TROAPQ12815 778 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 DPYDQ12882 1025 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 TRIM32Q13049 653 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 GPS2Q13227 327 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 PKN1Q16512 942 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 ARHGAP29Q52LW3 1261 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 CDKAL1Q5VV42 579 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 ISM2Q6H9L7 571 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 FBXO38Q6PIJ6 1188 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 BARGINQ6ZT62 677 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 TMEM139Q8IV31 216 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 MSL3Q8N5Y2 521 aaKnown RBP8.46□□□□□ -1.06
CFDP1-202ENST00000562602 TC2NQ8N9U0 490 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 CCDC148Q8NFR7 591 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 CCDC12Q8WUD4 166 aaPredicted RBP8.46□□□□□ -1.06
CFDP1-202ENST00000562602 DPF2Q92785 391 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 GOLGA1Q92805 767 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 GBP3Q9H0R5 595 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 SEC31BQ9NQW1 1179 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 ABCF2Q9UG63 623 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 LIMA1Q9UHB6 759 aaKnown RBP8.46□□□□□ -1.06
CFDP1-202ENST00000562602 PRDM4Q9UKN5 801 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 PCDHGC3Q9UN70 934 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.46□□□□□ -1.06
CFDP1-202ENST00000562602 SYNRGQ9UMZ2 1314 aa8.46□□□□□ -1.06
CFDP1-202ENST00000562602 ITGB4P16144 1822 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 NUP98P52948 1817 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 COL16A1Q07092 1604 aaPredicted RBP8.45□□□□□ -1.06
CFDP1-202ENST00000562602 VWA3AA6NCI4 1184 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 WNT7AO00755 349 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 ZBTB24O43167 697 aaPredicted RBP8.45□□□□□ -1.06
CFDP1-202ENST00000562602 ERLIN1O75477 346 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 LDHCP07864 332 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 MCM3P25205 808 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 NLRP5P59047 1200 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 NR5A1Q13285 461 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 CUL4BQ13620 913 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 BRD3Q15059 726 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 PFKFB3Q16875 520 aaPredicted RBP8.45□□□□□ -1.06
CFDP1-202ENST00000562602 ERCC6LQ2NKX8 1250 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 RC3H1Q5TC82 1133 aaKnown RBP8.45□□□□□ -1.06
CFDP1-202ENST00000562602 ZNF658Q5TYW1 1059 aaPredicted RBP8.45□□□□□ -1.06
CFDP1-202ENST00000562602 CYP26C1Q6V0L0 522 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 IGSF22Q8N9C0 903 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 MIGA1Q8NAN2 632 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 EHBP1Q8NDI1 1231 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 TNFRSF25Q93038 417 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 DHX58Q96C10 678 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 TCP11L1Q9NUJ3 509 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 ADD3Q9UEY8 706 aaKnown RBP8.45□□□□□ -1.06
CFDP1-202ENST00000562602 PARP3Q9Y6F1 533 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 RREB1Q92766 1687 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 SPATA31A1Q5TZJ5 1347 aa8.45□□□□□ -1.06
CFDP1-202ENST00000562602 COL22A1Q8NFW1 1626 aaPredicted RBP8.44□□□□□ -1.06
CFDP1-202ENST00000562602 BAG3O95817 575 aa8.44□□□□□ -1.06
CFDP1-202ENST00000562602 HMGB2P26583 209 aaKnown RBP8.44□□□□□ -1.06
CFDP1-202ENST00000562602 EEF1GP26641 437 aaKnown RBP8.44□□□□□ -1.06
CFDP1-202ENST00000562602 SMARCA1P28370 1054 aa8.44□□□□□ -1.06
CFDP1-202ENST00000562602 HIBADHP31937 336 aaKnown RBP8.44□□□□□ -1.06
CFDP1-202ENST00000562602 SSTR3P32745 418 aaPredicted RBP8.44□□□□□ -1.06
CFDP1-202ENST00000562602 PBX1P40424 430 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms