RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 CYP2B6P20813 491 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 ADORA2AP29274 412 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 SNAP25P60880 206 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 TKFCQ3LXA3 575 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 C8orf34Q49A92 452 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 CCDC174Q6PII3 467 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 BLOC1S2Q6QNY1 142 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 NFXL1Q6ZNB6 911 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 TRMT44Q8IYL2 757 aaKnown RBP19.5■□□□□ 0.71
CLK3-207ENST00000562389 STAG2Q8N3U4 1231 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 CHST13Q8NET6 341 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 SH3TC2Q8TF17 1288 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 ZNF333Q96JL9 665 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 AGBL1Q96MI9 1066 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 MMP19Q99542 508 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 UBA5Q9GZZ9 404 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 FBXO40Q9UH90 709 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 PNMA2Q9UL42 364 aa19.5■□□□□ 0.71
CLK3-207ENST00000562389 SMCHD1A6NHR9 2005 aa19.49■□□□□ 0.71
CLK3-207ENST00000562389 HTTP42858 3142 aa19.49■□□□□ 0.71
CLK3-207ENST00000562389 ADGRF4Q8IZF3 695 aa19.49■□□□□ 0.71
CLK3-207ENST00000562389 TCEANC2Q96MN5 208 aa19.49■□□□□ 0.71
CLK3-207ENST00000562389 CPVLQ9H3G5 476 aa19.49■□□□□ 0.71
CLK3-207ENST00000562389 RBBP6Q7Z6E9 1792 aaKnown RBP19.49■□□□□ 0.71
CLK3-207ENST00000562389 KLRF2D3W0D1 207 aa19.48■□□□□ 0.71
CLK3-207ENST00000562389 CALM1P0DP23 149 aa19.48■□□□□ 0.71
CLK3-207ENST00000562389 CALM2P0DP24 149 aa19.48■□□□□ 0.71
CLK3-207ENST00000562389 CALM3P0DP25 149 aa19.48■□□□□ 0.71
CLK3-207ENST00000562389 ELNP15502 786 aa19.48■□□□□ 0.71
CLK3-207ENST00000562389 CASTP20810 708 aaKnown RBP19.48■□□□□ 0.71
CLK3-207ENST00000562389 RPS6KB1P23443 525 aa19.48■□□□□ 0.71
CLK3-207ENST00000562389 SLC4A3P48751 1232 aa19.48■□□□□ 0.71
CLK3-207ENST00000562389 KCTD2Q14681 263 aa19.48■□□□□ 0.71
CLK3-207ENST00000562389 NUP133Q8WUM0 1156 aa19.48■□□□□ 0.71
CLK3-207ENST00000562389 TM6SF1Q9BZW5 370 aa19.48■□□□□ 0.71
CLK3-207ENST00000562389 ACAD9Q9H845 621 aa19.48■□□□□ 0.71
CLK3-207ENST00000562389 CCPG1Q9ULG6 757 aa19.48■□□□□ 0.71
CLK3-207ENST00000562389 SLC12A7Q9Y666 1083 aa19.48■□□□□ 0.71
CLK3-207ENST00000562389 HMGCRP04035 888 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 CPA1P15085 419 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 KIF5BP33176 963 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 ANAPC15P60006 121 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 UBXN2AP68543 259 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 CDC37Q16543 378 aaPredicted RBP19.47■□□□□ 0.71
CLK3-207ENST00000562389 DPP9Q86TI2 863 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 FBXL16Q8N461 479 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 CTCFLQ8NI51 663 aaPredicted RBP19.47■□□□□ 0.71
CLK3-207ENST00000562389 NPLOC4Q8TAT6 608 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 TRIB2Q92519 343 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 TRERF1Q96PN7 1200 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 MYL10Q9BUA6 226 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 JMJD4Q9H9V9 463 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 ZSWIM6Q9HCJ5 1215 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 HOMER2Q9NSB8 354 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 RNF146Q9NTX7 359 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 SLC5A4Q9NY91 659 aa19.47■□□□□ 0.71
CLK3-207ENST00000562389 CCDC85CA6NKD9 419 aa19.46■□□□□ 0.71
CLK3-207ENST00000562389 COBLO75128 1261 aa19.46■□□□□ 0.71
CLK3-207ENST00000562389 SEC24BO95487 1268 aa19.46■□□□□ 0.71
CLK3-207ENST00000562389 INHAP05111 366 aa19.46■□□□□ 0.71
CLK3-207ENST00000562389 ALAS1P13196 640 aa19.46■□□□□ 0.71
CLK3-207ENST00000562389 APOA5Q6Q788 366 aa19.46■□□□□ 0.71
CLK3-207ENST00000562389 MTMR8Q96EF0 704 aa19.46■□□□□ 0.71
CLK3-207ENST00000562389 AGXT2Q9BYV1 514 aa19.46■□□□□ 0.71
CLK3-207ENST00000562389 RIOX1Q9H6W3 641 aa19.46■□□□□ 0.71
CLK3-207ENST00000562389 DHX16O60231 1041 aaKnown RBP19.45■□□□□ 0.7
CLK3-207ENST00000562389 FGD1P98174 961 aa19.45■□□□□ 0.7
CLK3-207ENST00000562389 CCL14Q16627 93 aa19.45■□□□□ 0.7
CLK3-207ENST00000562389 OLFML2BQ68BL8 750 aa19.45■□□□□ 0.7
CLK3-207ENST00000562389 SYNE3Q6ZMZ3 975 aa19.45■□□□□ 0.7
CLK3-207ENST00000562389 Q6ZUG5 572 aa19.45■□□□□ 0.7
CLK3-207ENST00000562389 RUFY3Q7L099 469 aa19.45■□□□□ 0.7
CLK3-207ENST00000562389 IL17RAQ96F46 866 aa19.45■□□□□ 0.7
CLK3-207ENST00000562389 BIN2Q9UBW5 565 aaPredicted RBP19.45■□□□□ 0.7
CLK3-207ENST00000562389 DIS3Q9Y2L1 958 aaKnown RBP19.45■□□□□ 0.7
CLK3-207ENST00000562389 DNAJC25-GNG10A0A024R161 153 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 IGHA2P01877 340 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 TAL1P17542 331 aaPredicted RBP19.44■□□□□ 0.7
CLK3-207ENST00000562389 SMARCA1P28370 1054 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 GNAQP50148 359 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 RCAN1P53805 252 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 SLC35G1Q2M3R5 365 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 QRICH1Q2TAL8 776 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 ZNF792Q3KQV3 632 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 MUM1L1Q5H9M0 696 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 MICU3Q86XE3 530 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 ANKRD35Q8N283 1001 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 LZTS2Q9BRK4 669 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 VAT1LQ9HCJ6 419 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 FLRT1Q9NZU1 646 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 BRPF3Q9ULD4 1205 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 CYP46A1Q9Y6A2 500 aa19.44■□□□□ 0.7
CLK3-207ENST00000562389 LCTP09848 1927 aa19.43■□□□□ 0.7
CLK3-207ENST00000562389 ZBTB5O15062 677 aa19.43■□□□□ 0.7
CLK3-207ENST00000562389 CYTH3O43739 400 aa19.43■□□□□ 0.7
CLK3-207ENST00000562389 PGK2P07205 417 aa19.43■□□□□ 0.7
CLK3-207ENST00000562389 RXRAP19793 462 aa19.43■□□□□ 0.7
CLK3-207ENST00000562389 MAP3K21Q5TCX8 1036 aa19.43■□□□□ 0.7
CLK3-207ENST00000562389 FANCBQ8NB91 859 aa19.43■□□□□ 0.7
CLK3-207ENST00000562389 DDX11Q96FC9 970 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms