RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 SLAIN1Q8ND83 568 aa27.3■■□□□ 1.96
SMPD3-202ENST00000561749 MMP19Q99542 508 aa27.3■■□□□ 1.96
SMPD3-202ENST00000561749 MAD2L2Q9UI95 211 aa27.3■■□□□ 1.96
SMPD3-202ENST00000561749 BAZ2BQ9UIF8 2168 aaKnown RBP27.3■■□□□ 1.96
SMPD3-202ENST00000561749 DHX16O60231 1041 aaKnown RBP27.29■■□□□ 1.96
SMPD3-202ENST00000561749 FCER1AP12319 257 aa27.29■■□□□ 1.96
SMPD3-202ENST00000561749 ALAS1P13196 640 aa27.29■■□□□ 1.96
SMPD3-202ENST00000561749 COPB2P35606 906 aa27.29■■□□□ 1.96
SMPD3-202ENST00000561749 BLOC1S2Q6QNY1 142 aa27.29■■□□□ 1.96
SMPD3-202ENST00000561749 ARMC5Q96C12 935 aa27.29■■□□□ 1.96
SMPD3-202ENST00000561749 VAT1LQ9HCJ6 419 aa27.29■■□□□ 1.96
SMPD3-202ENST00000561749 WDR19Q8NEZ3 1342 aa27.29■■□□□ 1.96
SMPD3-202ENST00000561749 KLRF2D3W0D1 207 aa27.28■■□□□ 1.96
SMPD3-202ENST00000561749 HMGB1P09429 215 aaKnown RBP27.28■■□□□ 1.96
SMPD3-202ENST00000561749 RXRAP19793 462 aa27.28■■□□□ 1.96
SMPD3-202ENST00000561749 CASTP20810 708 aaKnown RBP27.28■■□□□ 1.96
SMPD3-202ENST00000561749 LIFRP42702 1097 aa27.28■■□□□ 1.96
SMPD3-202ENST00000561749 CCL14Q16627 93 aa27.28■■□□□ 1.96
SMPD3-202ENST00000561749 NBPF11Q86T75 865 aa27.28■■□□□ 1.96
SMPD3-202ENST00000561749 ADGRF4Q8IZF3 695 aa27.28■■□□□ 1.96
SMPD3-202ENST00000561749 TMTC2Q8N394 836 aa27.28■■□□□ 1.96
SMPD3-202ENST00000561749 NPLOC4Q8TAT6 608 aa27.28■■□□□ 1.96
SMPD3-202ENST00000561749 APBA2Q99767 749 aa27.28■■□□□ 1.96
SMPD3-202ENST00000561749 CCPG1Q9ULG6 757 aa27.28■■□□□ 1.96
SMPD3-202ENST00000561749 PALM3A6NDB9 673 aaPredicted RBP27.27■■□□□ 1.96
SMPD3-202ENST00000561749 STRNO43815 780 aa27.27■■□□□ 1.96
SMPD3-202ENST00000561749 KCTD2Q14681 263 aa27.27■■□□□ 1.96
SMPD3-202ENST00000561749 C8orf34Q49A92 452 aa27.27■■□□□ 1.96
SMPD3-202ENST00000561749 DPP9Q86TI2 863 aa27.27■■□□□ 1.96
SMPD3-202ENST00000561749 PXYLP1Q8TE99 480 aa27.27■■□□□ 1.96
SMPD3-202ENST00000561749 TRIB2Q92519 343 aa27.27■■□□□ 1.96
SMPD3-202ENST00000561749 ZNF333Q96JL9 665 aa27.27■■□□□ 1.96
SMPD3-202ENST00000561749 RNF146Q9NTX7 359 aa27.27■■□□□ 1.96
SMPD3-202ENST00000561749 COBLO75128 1261 aa27.26■■□□□ 1.95
SMPD3-202ENST00000561749 DDAH1O94760 285 aa27.26■■□□□ 1.95
SMPD3-202ENST00000561749 ICAM1P05362 532 aa27.26■■□□□ 1.95
SMPD3-202ENST00000561749 PGK2P07205 417 aa27.26■■□□□ 1.95
SMPD3-202ENST00000561749 PSMA5P28066 241 aa27.26■■□□□ 1.95
SMPD3-202ENST00000561749 TRIM32Q13049 653 aa27.26■■□□□ 1.95
SMPD3-202ENST00000561749 CDC37Q16543 378 aaPredicted RBP27.26■■□□□ 1.95
SMPD3-202ENST00000561749 CCDC144CPQ8IYA2 1237 aa27.26■■□□□ 1.95
SMPD3-202ENST00000561749 INHAP05111 366 aa27.25■■□□□ 1.95
SMPD3-202ENST00000561749 XRCC5P13010 732 aaKnown RBP27.25■■□□□ 1.95
SMPD3-202ENST00000561749 RPS6KB1P23443 525 aa27.25■■□□□ 1.95
SMPD3-202ENST00000561749 FGD1P98174 961 aa27.25■■□□□ 1.95
SMPD3-202ENST00000561749 ABRAQ8N0Z2 381 aa27.25■■□□□ 1.95
SMPD3-202ENST00000561749 CHST13Q8NET6 341 aa27.25■■□□□ 1.95
SMPD3-202ENST00000561749 TRERF1Q96PN7 1200 aa27.25■■□□□ 1.95
SMPD3-202ENST00000561749 JMJD4Q9H9V9 463 aa27.25■■□□□ 1.95
SMPD3-202ENST00000561749 SLC12A7Q9Y666 1083 aa27.25■■□□□ 1.95
SMPD3-202ENST00000561749 SOX10P56693 466 aa27.24■■□□□ 1.95
SMPD3-202ENST00000561749 MTFR1Q15390 333 aa27.24■■□□□ 1.95
SMPD3-202ENST00000561749 SLC35G1Q2M3R5 365 aa27.24■■□□□ 1.95
SMPD3-202ENST00000561749 MUM1L1Q5H9M0 696 aa27.24■■□□□ 1.95
SMPD3-202ENST00000561749 Q6ZUG5 572 aa27.24■■□□□ 1.95
SMPD3-202ENST00000561749 SGMS1Q86VZ5 419 aa27.24■■□□□ 1.95
SMPD3-202ENST00000561749 CTCFLQ8NI51 663 aaPredicted RBP27.24■■□□□ 1.95
SMPD3-202ENST00000561749 ACAD9Q9H845 621 aa27.24■■□□□ 1.95
SMPD3-202ENST00000561749 FLRT1Q9NZU1 646 aa27.24■■□□□ 1.95
SMPD3-202ENST00000561749 BRPF3Q9ULD4 1205 aa27.24■■□□□ 1.95
SMPD3-202ENST00000561749 HMGCRP04035 888 aa27.23■■□□□ 1.95
SMPD3-202ENST00000561749 UBXN2AP68543 259 aa27.23■■□□□ 1.95
SMPD3-202ENST00000561749 TKFCQ3LXA3 575 aa27.23■■□□□ 1.95
SMPD3-202ENST00000561749 MICU3Q86XE3 530 aa27.23■■□□□ 1.95
SMPD3-202ENST00000561749 FBXO40Q9UH90 709 aa27.23■■□□□ 1.95
SMPD3-202ENST00000561749 HTTP42858 3142 aa27.23■■□□□ 1.95
SMPD3-202ENST00000561749 HOXC6P09630 235 aa27.22■■□□□ 1.95
SMPD3-202ENST00000561749 QRICH1Q2TAL8 776 aa27.22■■□□□ 1.95
SMPD3-202ENST00000561749 USH1GQ495M9 461 aa27.22■■□□□ 1.95
SMPD3-202ENST00000561749 APOA5Q6Q788 366 aa27.22■■□□□ 1.95
SMPD3-202ENST00000561749 ANKRD35Q8N283 1001 aa27.22■■□□□ 1.95
SMPD3-202ENST00000561749 DDX11Q96FC9 970 aa27.22■■□□□ 1.95
SMPD3-202ENST00000561749 UPF3BQ9BZI7 483 aaKnown RBP27.22■■□□□ 1.95
SMPD3-202ENST00000561749 NAP1L2Q9ULW6 460 aaPredicted RBP27.22■■□□□ 1.95
SMPD3-202ENST00000561749 RBBP6Q7Z6E9 1792 aaKnown RBP27.22■■□□□ 1.95
SMPD3-202ENST00000561749 LCTP09848 1927 aa27.22■■□□□ 1.95
SMPD3-202ENST00000561749 KLF18A0A0U1RQI7 1052 aa27.21■■□□□ 1.95
SMPD3-202ENST00000561749 SYNE3Q6ZMZ3 975 aa27.21■■□□□ 1.95
SMPD3-202ENST00000561749 PIBF1Q8WXW3 757 aa27.21■■□□□ 1.95
SMPD3-202ENST00000561749 BRF1Q92994 677 aa27.21■■□□□ 1.95
SMPD3-202ENST00000561749 MCM3APO60318 1980 aa27.2■■□□□ 1.95
SMPD3-202ENST00000561749 CYTH3O43739 400 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 EIF5BO60841 1220 aaKnown RBP27.2■■□□□ 1.94
SMPD3-202ENST00000561749 PLEKHA8P1O95397 391 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 CALM1P0DP23 149 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 CALM2P0DP24 149 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 CALM3P0DP25 149 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 CCL5P13501 91 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 KIF5BP33176 963 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 APOBRQ0VD83 1088 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 RUFY3Q7L099 469 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 HOMER1Q86YM7 354 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 MAP3K14Q99558 947 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 UNC93B1Q9H1C4 597 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 ZSWIM6Q9HCJ5 1215 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 SLC5A4Q9NY91 659 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 CYP46A1Q9Y6A2 500 aa27.2■■□□□ 1.94
SMPD3-202ENST00000561749 NSMFQ6X4W1 530 aa27.19■■□□□ 1.94
SMPD3-202ENST00000561749 TRMT44Q8IYL2 757 aaKnown RBP27.19■■□□□ 1.94
SMPD3-202ENST00000561749 CMTR1Q8N1G2 835 aaKnown RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms