RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 COPB1P53618 953 aaKnown RBP13.88□□□□□ -0.19
SYNM-203ENST00000560674 TCIRG1Q13488 830 aa13.88□□□□□ -0.19
SYNM-203ENST00000560674 PTPROQ16827 1216 aa13.88□□□□□ -0.19
SYNM-203ENST00000560674 FAM102BQ5T8I3 360 aa13.88□□□□□ -0.19
SYNM-203ENST00000560674 TDRD7Q8NHU6 1098 aaKnown RBP13.88□□□□□ -0.19
SYNM-203ENST00000560674 PSTPIP2Q9H939 334 aa13.88□□□□□ -0.19
SYNM-203ENST00000560674 CDC23Q9UJX2 597 aa13.88□□□□□ -0.19
SYNM-203ENST00000560674 MAST1Q9Y2H9 1570 aa13.88□□□□□ -0.19
SYNM-203ENST00000560674 BTBD18B2RXH4 712 aa13.87□□□□□ -0.19
SYNM-203ENST00000560674 STAM2O75886 525 aa13.87□□□□□ -0.19
SYNM-203ENST00000560674 TRIM68Q6AZZ1 485 aa13.87□□□□□ -0.19
SYNM-203ENST00000560674 BBOF1Q8ND07 529 aa13.87□□□□□ -0.19
SYNM-203ENST00000560674 SYMPKQ92797 1274 aaKnown RBP13.87□□□□□ -0.19
SYNM-203ENST00000560674 C1orf112Q9NSG2 853 aa13.87□□□□□ -0.19
SYNM-203ENST00000560674 EIF4G3O43432 1585 aaKnown RBP13.87□□□□□ -0.19
SYNM-203ENST00000560674 LONP1P36776 959 aaKnown RBP13.87□□□□□ -0.19
SYNM-203ENST00000560674 RIOK1Q9BRS2 568 aaKnown RBP13.87□□□□□ -0.19
SYNM-203ENST00000560674 DDAH1O94760 285 aa13.87□□□□□ -0.19
SYNM-203ENST00000560674 ATF2P15336 505 aa13.87□□□□□ -0.19
SYNM-203ENST00000560674 PDE6AP16499 860 aa13.87□□□□□ -0.19
SYNM-203ENST00000560674 RPS6KA2Q15349 733 aa13.87□□□□□ -0.19
SYNM-203ENST00000560674 PRR16Q569H4 304 aa13.87□□□□□ -0.19
SYNM-203ENST00000560674 NACA2Q9H009 215 aa13.87□□□□□ -0.19
SYNM-203ENST00000560674 KAT6BQ8WYB5 2073 aa13.87□□□□□ -0.19
SYNM-203ENST00000560674 SLC39A2Q9NP94 309 aa13.87□□□□□ -0.19
SYNM-203ENST00000560674 RTEL1Q9NZ71 1219 aa13.87□□□□□ -0.19
SYNM-203ENST00000560674 PDIA3P30101 505 aaKnown RBP13.86□□□□□ -0.19
SYNM-203ENST00000560674 SH3BGRP55822 239 aaPredicted RBP13.86□□□□□ -0.19
SYNM-203ENST00000560674 GUCY2DQ02846 1103 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 HAUS1Q96CS2 278 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 K7ENM7 598 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 ATF7P17544 494 aaPredicted RBP13.86□□□□□ -0.19
SYNM-203ENST00000560674 ADAM9Q13443 819 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 GAS2L3Q86XJ1 694 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 PNMA1Q8ND90 353 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 CHURC1Q8WUH1 139 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 PASKQ96RG2 1323 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 ATP8B1O43520 1251 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 SCRN1Q12765 414 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 CUL4BQ13620 913 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 ADAT2Q7Z6V5 191 aaKnown RBP13.86□□□□□ -0.19
SYNM-203ENST00000560674 FAN1Q9Y2M0 1017 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 CASP14P31944 242 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 BAG2O95816 211 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 GCKP35557 465 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 UHMK1Q8TAS1 419 aaKnown RBP13.86□□□□□ -0.19
SYNM-203ENST00000560674 GSDMBQ8TAX9 411 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 MAGEF1Q9HAY2 307 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 DDX25Q9UHL0 483 aaKnown RBP13.86□□□□□ -0.19
SYNM-203ENST00000560674 COL4A3BPQ9Y5P4 624 aa13.86□□□□□ -0.19
SYNM-203ENST00000560674 FGAP02671 866 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 LIG4P49917 911 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 FAM26FQ5R3K3 315 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 Q9H521 79 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 EFCC1Q9HA90 598 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 FRMPD2Q68DX3 1309 aaPredicted RBP13.85□□□□□ -0.19
SYNM-203ENST00000560674 YARSP54577 528 aaKnown RBP13.85□□□□□ -0.19
SYNM-203ENST00000560674 PTGDRQ13258 359 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 SNCBQ16143 134 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 CAPN12Q6ZSI9 719 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 FAM178BQ8IXR5 827 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 STAG1Q8WVM7 1258 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 GPKOWQ92917 476 aaPredicted RBP eCLIP13.85□□□□□ -0.19
SYNM-203ENST00000560674 DDX27Q96GQ7 796 aaKnown RBP13.85□□□□□ -0.19
SYNM-203ENST00000560674 RUNDC3BQ96NL0 473 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 LSG1Q9H089 658 aaKnown RBP13.85□□□□□ -0.19
SYNM-203ENST00000560674 USP40Q9NVE5 1235 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 PTPRTO14522 1441 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 PDE1CQ14123 709 aaPredicted RBP13.85□□□□□ -0.19
SYNM-203ENST00000560674 NXNQ6DKJ4 435 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 TRIM50Q86XT4 487 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 PLXNC1O60486 1568 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 OPHN1O60890 802 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 CNGA1P29973 690 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 SCYL2Q6P3W7 929 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 SLC35F6Q8N357 371 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 SUPT20HQ8NEM7 779 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 FBXO18Q8NFZ0 1043 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 CNOT6LQ96LI5 555 aaKnown RBP13.85□□□□□ -0.19
SYNM-203ENST00000560674 KLRF2D3W0D1 207 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 PPP6R2O75170 966 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 CLTAP09496 248 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 CCT5P48643 541 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 EHHADHQ08426 723 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 CFAP61Q8NHU2 1237 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 LRRC8CQ8TDW0 803 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 SDR42E1Q8WUS8 393 aa13.85□□□□□ -0.19
SYNM-203ENST00000560674 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.85□□□□□ -0.19
SYNM-203ENST00000560674 GSDMAQ96QA5 445 aa13.84□□□□□ -0.19
SYNM-203ENST00000560674 VGLL3A8MV65 326 aa13.84□□□□□ -0.19
SYNM-203ENST00000560674 RASSF7Q02833 373 aa13.84□□□□□ -0.19
SYNM-203ENST00000560674 LARGE2Q8N3Y3 721 aa13.84□□□□□ -0.19
SYNM-203ENST00000560674 ADGRL2O95490 1459 aa13.84□□□□□ -0.19
SYNM-203ENST00000560674 H0YCG3 227 aa13.84□□□□□ -0.19
SYNM-203ENST00000560674 LUC7L3O95232 432 aaKnown RBP13.84□□□□□ -0.19
SYNM-203ENST00000560674 ARHGAP4P98171 946 aa13.84□□□□□ -0.19
SYNM-203ENST00000560674 BFSP1Q12934 665 aa13.84□□□□□ -0.19
SYNM-203ENST00000560674 GNPTABQ3T906 1256 aa13.84□□□□□ -0.19
SYNM-203ENST00000560674 NRBP1Q9UHY1 535 aa13.84□□□□□ -0.19
SYNM-203ENST00000560674 BZW2Q9Y6E2 419 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms