RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 TRDNQ13061 729 aa17.41■□□□□ 0.38
RABGGTA-211ENST00000559850 COL9A3Q14050 684 aaPredicted RBP17.41■□□□□ 0.38
RABGGTA-211ENST00000559850 DIS3LQ8TF46 1054 aaKnown RBP17.41■□□□□ 0.38
RABGGTA-211ENST00000559850 ANKS1AQ92625 1134 aa17.41■□□□□ 0.38
RABGGTA-211ENST00000559850 UBA5Q9GZZ9 404 aa17.41■□□□□ 0.38
RABGGTA-211ENST00000559850 CRISPLD2Q9H0B8 497 aa17.41■□□□□ 0.38
RABGGTA-211ENST00000559850 RNF146Q9NTX7 359 aa17.41■□□□□ 0.38
RABGGTA-211ENST00000559850 PPP4R2Q9NY27 417 aa17.41■□□□□ 0.38
RABGGTA-211ENST00000559850 ALPK3Q96L96 1907 aa17.41■□□□□ 0.38
RABGGTA-211ENST00000559850 FARP2O94887 1054 aaPredicted RBP17.4■□□□□ 0.38
RABGGTA-211ENST00000559850 IGHA2P01877 340 aa17.4■□□□□ 0.38
RABGGTA-211ENST00000559850 SNHG28P0DPA3 235 aa17.4■□□□□ 0.38
RABGGTA-211ENST00000559850 SEC23AQ15436 765 aa17.4■□□□□ 0.38
RABGGTA-211ENST00000559850 ZNF792Q3KQV3 632 aa17.4■□□□□ 0.38
RABGGTA-211ENST00000559850 CCDC178Q5BJE1 867 aa17.4■□□□□ 0.38
RABGGTA-211ENST00000559850 IFIT1BQ5T764 474 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-211ENST00000559850 ANO1Q5XXA6 986 aa17.4■□□□□ 0.38
RABGGTA-211ENST00000559850 OLFML2BQ68BL8 750 aa17.4■□□□□ 0.38
RABGGTA-211ENST00000559850 BTNL9Q6UXG8 535 aa17.4■□□□□ 0.38
RABGGTA-211ENST00000559850 RALYLQ86SE5 291 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-211ENST00000559850 DDX11Q96FC9 970 aa17.4■□□□□ 0.38
RABGGTA-211ENST00000559850 RANBP17Q9H2T7 1088 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-211ENST00000559850 SLC27A2O14975 620 aa17.39■□□□□ 0.37
RABGGTA-211ENST00000559850 ANTXR2P58335 489 aa17.39■□□□□ 0.37
RABGGTA-211ENST00000559850 MUM1L1Q5H9M0 696 aa17.39■□□□□ 0.37
RABGGTA-211ENST00000559850 CREB3L3Q68CJ9 461 aa17.39■□□□□ 0.37
RABGGTA-211ENST00000559850 ANKRD35Q8N283 1001 aa17.39■□□□□ 0.37
RABGGTA-211ENST00000559850 NCOA7Q8NI08 942 aa17.39■□□□□ 0.37
RABGGTA-211ENST00000559850 TRERF1Q96PN7 1200 aa17.39■□□□□ 0.37
RABGGTA-211ENST00000559850 GPHNQ9NQX3 736 aaPredicted RBP17.39■□□□□ 0.37
RABGGTA-211ENST00000559850 SLC5A4Q9NY91 659 aa17.39■□□□□ 0.37
RABGGTA-211ENST00000559850 CCPG1Q9ULG6 757 aa17.39■□□□□ 0.37
RABGGTA-211ENST00000559850 IFIT3O14879 490 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-211ENST00000559850 FDX1P10109 184 aa17.38■□□□□ 0.37
RABGGTA-211ENST00000559850 CYBAP13498 195 aa17.38■□□□□ 0.37
RABGGTA-211ENST00000559850 NT5C2P49902 561 aa17.38■□□□□ 0.37
RABGGTA-211ENST00000559850 LHX8Q68G74 356 aa17.38■□□□□ 0.37
RABGGTA-211ENST00000559850 UBE2Q1Q7Z7E8 422 aa17.38■□□□□ 0.37
RABGGTA-211ENST00000559850 MB21D2Q8IYB1 491 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-211ENST00000559850 CHST13Q8NET6 341 aa17.38■□□□□ 0.37
RABGGTA-211ENST00000559850 PAWRQ96IZ0 340 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-211ENST00000559850 PDE4DIPQ5VU43 2346 aa17.37■□□□□ 0.37
RABGGTA-211ENST00000559850 DNAJC25-GNG10A0A024R161 153 aa17.37■□□□□ 0.37
RABGGTA-211ENST00000559850 MNX1P50219 401 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-211ENST00000559850 CNTN2Q02246 1040 aa17.37■□□□□ 0.37
RABGGTA-211ENST00000559850 NECTIN1Q15223 517 aa17.37■□□□□ 0.37
RABGGTA-211ENST00000559850 CASC1Q6TDU7 716 aa17.37■□□□□ 0.37
RABGGTA-211ENST00000559850 STAG2Q8N3U4 1231 aa17.37■□□□□ 0.37
RABGGTA-211ENST00000559850 FGD4Q96M96 766 aa17.37■□□□□ 0.37
RABGGTA-211ENST00000559850 TINF2Q9BSI4 451 aa17.37■□□□□ 0.37
RABGGTA-211ENST00000559850 ACAD9Q9H845 621 aa17.37■□□□□ 0.37
RABGGTA-211ENST00000559850 A1CFQ9NQ94 594 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-211ENST00000559850 FBXO40Q9UH90 709 aa17.37■□□□□ 0.37
RABGGTA-211ENST00000559850 DDX49Q9Y6V7 483 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-211ENST00000559850 LRRC37A2A6NM11 1700 aa17.36■□□□□ 0.37
RABGGTA-211ENST00000559850 ICAM1P05362 532 aa17.36■□□□□ 0.37
RABGGTA-211ENST00000559850 PARP1P09874 1014 aaKnown RBP17.36■□□□□ 0.37
RABGGTA-211ENST00000559850 TMEM67Q5HYA8 995 aa17.36■□□□□ 0.37
RABGGTA-211ENST00000559850 PURBQ96QR8 312 aaKnown RBP17.36■□□□□ 0.37
RABGGTA-211ENST00000559850 VAT1LQ9HCJ6 419 aa17.36■□□□□ 0.37
RABGGTA-211ENST00000559850 DDX20Q9UHI6 824 aaKnown RBP17.36■□□□□ 0.37
RABGGTA-211ENST00000559850 OGDHLQ9ULD0 1010 aa17.36■□□□□ 0.37
RABGGTA-211ENST00000559850 WTAPQ15007 396 aa17.35■□□□□ 0.37
RABGGTA-211ENST00000559850 TKFCQ3LXA3 575 aa17.35■□□□□ 0.37
RABGGTA-211ENST00000559850 USH1GQ495M9 461 aa17.35■□□□□ 0.37
RABGGTA-211ENST00000559850 ASPRV1Q53RT3 343 aa17.35■□□□□ 0.37
RABGGTA-211ENST00000559850 GPATCH4Q5T3I0 446 aaKnown RBP17.35■□□□□ 0.37
RABGGTA-211ENST00000559850 NSMFQ6X4W1 530 aa17.35■□□□□ 0.37
RABGGTA-211ENST00000559850 LENG1Q96BZ8 264 aaPredicted RBP17.35■□□□□ 0.37
RABGGTA-211ENST00000559850 DIS3Q9Y2L1 958 aaKnown RBP17.35■□□□□ 0.37
RABGGTA-211ENST00000559850 MKI67P46013 3256 aaKnown RBP17.34■□□□□ 0.37
RABGGTA-211ENST00000559850 ERICH2A1L162 156 aa17.34■□□□□ 0.37
RABGGTA-211ENST00000559850 SOWAHBA6NEL2 793 aa17.34■□□□□ 0.37
RABGGTA-211ENST00000559850 POTEB2H3BUK9 544 aa17.34■□□□□ 0.37
RABGGTA-211ENST00000559850 NFIBO00712 420 aa17.34■□□□□ 0.37
RABGGTA-211ENST00000559850 PRC1O43663 620 aa17.34■□□□□ 0.37
RABGGTA-211ENST00000559850 DHX16O60231 1041 aaKnown RBP17.34■□□□□ 0.37
RABGGTA-211ENST00000559850 CDC37Q16543 378 aaPredicted RBP17.34■□□□□ 0.37
RABGGTA-211ENST00000559850 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.34■□□□□ 0.37
RABGGTA-211ENST00000559850 ADGRF4Q8IZF3 695 aa17.34■□□□□ 0.37
RABGGTA-211ENST00000559850 IGDCC4Q8TDY8 1250 aa17.34■□□□□ 0.37
RABGGTA-211ENST00000559850 LRRC2Q9BYS8 371 aa17.34■□□□□ 0.37
RABGGTA-211ENST00000559850 ASTN1O14525 1302 aa17.33■□□□□ 0.36
RABGGTA-211ENST00000559850 SNAI1O95863 264 aaPredicted RBP17.33■□□□□ 0.36
RABGGTA-211ENST00000559850 MYCNP04198 464 aaPredicted RBP17.33■□□□□ 0.36
RABGGTA-211ENST00000559850 RAB11FIP4Q86YS3 637 aa17.33■□□□□ 0.36
RABGGTA-211ENST00000559850 RASEFQ8IZ41 740 aa17.33■□□□□ 0.36
RABGGTA-211ENST00000559850 FAM133AQ8N9E0 248 aa17.33■□□□□ 0.36
RABGGTA-211ENST00000559850 DPF3Q92784 378 aa17.33■□□□□ 0.36
RABGGTA-211ENST00000559850 MYL10Q9BUA6 226 aa17.33■□□□□ 0.36
RABGGTA-211ENST00000559850 LY9Q9HBG7 655 aa17.33■□□□□ 0.36
RABGGTA-211ENST00000559850 CYP39A1Q9NYL5 469 aa17.33■□□□□ 0.36
RABGGTA-211ENST00000559850 MAD2L2Q9UI95 211 aa17.33■□□□□ 0.36
RABGGTA-211ENST00000559850 ZHX1Q9UKY1 873 aaPredicted RBP17.33■□□□□ 0.36
RABGGTA-211ENST00000559850 KLRF2D3W0D1 207 aa17.32■□□□□ 0.36
RABGGTA-211ENST00000559850 SEPT4O43236 478 aa17.32■□□□□ 0.36
RABGGTA-211ENST00000559850 ZNF865P0CJ78 1059 aaPredicted RBP17.32■□□□□ 0.36
RABGGTA-211ENST00000559850 BAATQ14032 418 aaPredicted RBP17.32■□□□□ 0.36
RABGGTA-211ENST00000559850 GRM4Q14833 912 aa17.32■□□□□ 0.36
RABGGTA-211ENST00000559850 SART3Q15020 963 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms