RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 KATNBL1Q9H079 304 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 SEMA6BQ9H3T3 888 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 GRPEL1Q9HAV7 217 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 GOPCQ9HD26 462 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 XPNPEP3Q9NQH7 507 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 RRAGDQ9NQL2 400 aaPredicted RBP6.94□□□□□ -1.3
USP3-212ENST00000559276 TACC3Q9Y6A5 838 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 SYNRGQ9UMZ2 1314 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 REV3LO60673 3130 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 PLIN4Q96Q06 1357 aa6.94□□□□□ -1.3
USP3-212ENST00000559276 ESPNB1AK53 854 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 KIAA0355O15063 1070 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 CTAGE5O15320 804 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 RNF113AO15541 343 aaKnown RBP6.93□□□□□ -1.3
USP3-212ENST00000559276 GPAA1O43292 621 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 PRDM1O75626 825 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 MYCNP04198 464 aaPredicted RBP6.93□□□□□ -1.3
USP3-212ENST00000559276 HSP90AA1P07900 732 aaKnown RBP6.93□□□□□ -1.3
USP3-212ENST00000559276 NUCB1Q02818 461 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 CCDC173Q0VFZ6 552 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 FAAP100Q0VG06 881 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 KCTD2Q14681 263 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 SNRNP48Q6IEG0 339 aaKnown RBP6.93□□□□□ -1.3
USP3-212ENST00000559276 ZSCAN25Q6NSZ9 544 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 ANKRD33Q7Z3H0 272 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 PI4K2BQ8TCG2 481 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 ANP32BQ92688 251 aaKnown RBP6.93□□□□□ -1.3
USP3-212ENST00000559276 TRIM44Q96DX7 344 aaPredicted RBP6.93□□□□□ -1.3
USP3-212ENST00000559276 CEP95Q96GE4 821 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 CDX2Q99626 313 aaPredicted RBP6.93□□□□□ -1.3
USP3-212ENST00000559276 SLF1Q9BQI6 1058 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 TEX13BQ9BXU2 312 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 SLC38A10Q9HBR0 1119 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 PRDM5Q9NQX1 630 aaPredicted RBP6.93□□□□□ -1.3
USP3-212ENST00000559276 SLC5A4Q9NY91 659 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 MTMR4Q9NYA4 1195 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 CLIP2Q9UDT6 1046 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 ASTN1O14525 1302 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 ZNF536O15090 1300 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 SYNGAP1Q96PV0 1343 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 SALL3Q9BXA9 1300 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 MUC3AQ02505 3323 aa6.93□□□□□ -1.3
USP3-212ENST00000559276 MINDY4BA8MYZ0 360 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 CLTBP09497 229 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 RARBP10826 455 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 AKR1A1P14550 325 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 PTGS1P23219 599 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 CDK7P50613 346 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 ACLYP53396 1101 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 SMAD3P84022 425 aaKnown RBP6.92□□□□□ -1.3
USP3-212ENST00000559276 C16orf59Q7L2K0 433 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 RASGRP2Q7LDG7 609 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 ZNF467Q7Z7K2 595 aaPredicted RBP6.92□□□□□ -1.3
USP3-212ENST00000559276 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.92□□□□□ -1.3
USP3-212ENST00000559276 IFNL3Q8IZI9 196 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 LRRC47Q8N1G4 583 aaKnown RBP6.92□□□□□ -1.3
USP3-212ENST00000559276 MSL3Q8N5Y2 521 aaKnown RBP6.92□□□□□ -1.3
USP3-212ENST00000559276 PRPF38AQ8NAV1 312 aaKnown RBP6.92□□□□□ -1.3
USP3-212ENST00000559276 TOX2Q96NM4 488 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 TSEN34Q9BSV6 310 aaKnown RBP6.92□□□□□ -1.3
USP3-212ENST00000559276 UPF3AQ9H1J1 476 aaKnown RBP6.92□□□□□ -1.3
USP3-212ENST00000559276 RAVER2Q9HCJ3 691 aaKnown RBP6.92□□□□□ -1.3
USP3-212ENST00000559276 INCENPQ9NQS7 918 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 PRKAG2Q9UGJ0 569 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 TBX21Q9UL17 535 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 DDX49Q9Y6V7 483 aaKnown RBP6.92□□□□□ -1.3
USP3-212ENST00000559276 CUL9Q8IWT3 2517 aa6.92□□□□□ -1.3
USP3-212ENST00000559276 CHD7Q9P2D1 2997 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 SOWAHBA6NEL2 793 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 PATL2C9JE40 543 aaKnown RBP6.91□□□□□ -1.3
USP3-212ENST00000559276 RAD21O60216 631 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 PQBP1O60828 265 aaKnown RBP6.91□□□□□ -1.3
USP3-212ENST00000559276 DUSP11O75319 330 aaKnown RBP6.91□□□□□ -1.3
USP3-212ENST00000559276 CST5P28325 142 aaPredicted RBP6.91□□□□□ -1.3
USP3-212ENST00000559276 COPB2P35606 906 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 NOVP48745 357 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 MFAP1P55081 439 aaKnown RBP6.91□□□□□ -1.3
USP3-212ENST00000559276 NKX3-2P78367 333 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 CNTN2Q02246 1040 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 ACVR2BQ13705 512 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 KCNA10Q16322 511 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 CCDC144BQ3MJ40 725 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 ZMYM1Q5SVZ6 1142 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 TMEM63BQ5T3F8 832 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 ZNF697Q5TEC3 545 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 RNF180Q86T96 592 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 AMOTL1Q8IY63 956 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 CPXCR1Q8N123 301 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 FAM133AQ8N9E0 248 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 GMCL1P1Q8NEA9 526 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 NEDD1Q8NHV4 660 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 MYLIPQ8WY64 445 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 KIFC2Q96AC6 838 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 PPP1R9BQ96SB3 815 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 MAP7D2Q96T17 732 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 MKNK2Q9HBH9 465 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 IL17RBQ9NRM6 502 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.91□□□□□ -1.3
USP3-212ENST00000559276 SYNPO2Q9UMS6 1093 aa6.91□□□□□ -1.3
USP3-212ENST00000559276 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms