RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MCM3APO60318 1980 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 GOLGA8AA7E2F4 631 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 ATP2A1O14983 1001 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 ERCC3P19447 782 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 ADD1P35611 737 aaKnown RBP12.7□□□□□ -0.38
TPM1-217ENST00000559108 CCT2P78371 535 aaKnown RBP12.7□□□□□ -0.38
TPM1-217ENST00000559108 IKQ13123 557 aaPredicted RBP12.7□□□□□ -0.38
TPM1-217ENST00000559108 PLS1Q14651 629 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 NTRK3Q16288 839 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 CDC37Q16543 378 aaPredicted RBP12.7□□□□□ -0.38
TPM1-217ENST00000559108 ME3Q16798 604 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 QRICH1Q2TAL8 776 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 MUM1L1Q5H9M0 696 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 SNRNP48Q6IEG0 339 aaKnown RBP12.7□□□□□ -0.38
TPM1-217ENST00000559108 CHURC1Q8WUH1 139 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 SHISA4Q96DD7 197 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 PIGSQ96S52 555 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 MAP3K14Q99558 947 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 VAT1LQ9HCJ6 419 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 GABRQQ9UN88 632 aa12.7□□□□□ -0.38
TPM1-217ENST00000559108 OPLAHO14841 1288 aa12.69□□□□□ -0.38
TPM1-217ENST00000559108 PSMC4P43686 418 aa12.69□□□□□ -0.38
TPM1-217ENST00000559108 FGD1P98174 961 aa12.69□□□□□ -0.38
TPM1-217ENST00000559108 SCRN1Q12765 414 aa12.69□□□□□ -0.38
TPM1-217ENST00000559108 STK3Q13188 491 aa12.69□□□□□ -0.38
TPM1-217ENST00000559108 RTN1Q16799 776 aa12.69□□□□□ -0.38
TPM1-217ENST00000559108 OTOP1Q7RTM1 612 aa12.69□□□□□ -0.38
TPM1-217ENST00000559108 RIOX2Q8IUF8 465 aa12.69□□□□□ -0.38
TPM1-217ENST00000559108 TMTC2Q8N394 836 aa12.69□□□□□ -0.38
TPM1-217ENST00000559108 CCDC82Q8N4S0 544 aa12.69□□□□□ -0.38
TPM1-217ENST00000559108 NECAB1Q8N987 351 aa12.69□□□□□ -0.38
TPM1-217ENST00000559108 PIBF1Q8WXW3 757 aa12.69□□□□□ -0.38
TPM1-217ENST00000559108 GJD2Q9UKL4 321 aa12.69□□□□□ -0.38
TPM1-217ENST00000559108 EIF5BO60841 1220 aaKnown RBP12.68□□□□□ -0.38
TPM1-217ENST00000559108 CTDNEP1O95476 244 aa12.68□□□□□ -0.38
TPM1-217ENST00000559108 ICAM1P05362 532 aa12.68□□□□□ -0.38
TPM1-217ENST00000559108 STAT3P40763 770 aa12.68□□□□□ -0.38
TPM1-217ENST00000559108 SLC4A3P48751 1232 aa12.68□□□□□ -0.38
TPM1-217ENST00000559108 METAP2P50579 478 aaKnown RBP eCLIP12.68□□□□□ -0.38
TPM1-217ENST00000559108 PRKCZQ05513 592 aa12.68□□□□□ -0.38
TPM1-217ENST00000559108 TYW1BQ6NUM6 668 aa12.68□□□□□ -0.38
TPM1-217ENST00000559108 GPR142Q7Z601 462 aa12.68□□□□□ -0.38
TPM1-217ENST00000559108 MB21D1Q8N884 522 aa12.68□□□□□ -0.38
TPM1-217ENST00000559108 CTCFLQ8NI51 663 aaPredicted RBP12.68□□□□□ -0.38
TPM1-217ENST00000559108 GTF3C2Q8WUA4 911 aaPredicted RBP12.68□□□□□ -0.38
TPM1-217ENST00000559108 CLEC4DQ8WXI8 215 aa12.68□□□□□ -0.38
TPM1-217ENST00000559108 USP6NLQ92738 828 aa12.68□□□□□ -0.38
TPM1-217ENST00000559108 FGD4Q96M96 766 aa12.68□□□□□ -0.38
TPM1-217ENST00000559108 PURBQ96QR8 312 aaKnown RBP12.68□□□□□ -0.38
TPM1-217ENST00000559108 SPZ1Q9BXG8 430 aa12.68□□□□□ -0.38
TPM1-217ENST00000559108 TEX13BQ9BXU2 312 aa12.68□□□□□ -0.38
TPM1-217ENST00000559108 HOMER2Q9NSB8 354 aa12.68□□□□□ -0.38
TPM1-217ENST00000559108 NAP1L2Q9ULW6 460 aaPredicted RBP12.68□□□□□ -0.38
TPM1-217ENST00000559108 ASTN1O14525 1302 aa12.67□□□□□ -0.38
TPM1-217ENST00000559108 NFIBO00712 420 aa12.67□□□□□ -0.38
TPM1-217ENST00000559108 ADAMTS3O15072 1205 aa12.67□□□□□ -0.38
TPM1-217ENST00000559108 ZBED4O75132 1171 aa12.67□□□□□ -0.38
TPM1-217ENST00000559108 RCAN1P53805 252 aa12.67□□□□□ -0.38
TPM1-217ENST00000559108 MORN1Q5T089 497 aa12.67□□□□□ -0.38
TPM1-217ENST00000559108 NCAPG2Q86XI2 1143 aa12.67□□□□□ -0.38
TPM1-217ENST00000559108 HOMER1Q86YM7 354 aa12.67□□□□□ -0.38
TPM1-217ENST00000559108 TBC1D5Q92609 795 aa12.67□□□□□ -0.38
TPM1-217ENST00000559108 PHKBQ93100 1093 aa12.67□□□□□ -0.38
TPM1-217ENST00000559108 ZNF274Q96GC6 653 aaPredicted RBP12.67□□□□□ -0.38
TPM1-217ENST00000559108 PRDM10Q9NQV6 1147 aa12.67□□□□□ -0.38
TPM1-217ENST00000559108 DDX49Q9Y6V7 483 aaKnown RBP12.67□□□□□ -0.38
TPM1-217ENST00000559108 TNPO2O14787 897 aaKnown RBP12.66□□□□□ -0.38
TPM1-217ENST00000559108 ZBTB5O15062 677 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 PFKFB2O60825 505 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 COBLO75128 1261 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 CALM1P0DP23 149 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 CALM2P0DP24 149 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 CALM3P0DP25 149 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 ALAS1P13196 640 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 KIF5BP33176 963 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 OAZ1P54368 228 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 RABEP1Q15276 862 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 PKN1Q16512 942 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 USH1GQ495M9 461 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 COL13A1Q5TAT6 717 aaPredicted RBP12.66□□□□□ -0.38
TPM1-217ENST00000559108 SHCBP1Q8NEM2 672 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 COA7Q96BR5 231 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 ERO1AQ96HE7 468 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 RNF146Q9NTX7 359 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 CCPG1Q9ULG6 757 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 TRIM17Q9Y577 477 aa12.66□□□□□ -0.38
TPM1-217ENST00000559108 FRMPD3Q5JV73 1810 aa12.65□□□□□ -0.38
TPM1-217ENST00000559108 DHX16O60231 1041 aaKnown RBP12.65□□□□□ -0.38
TPM1-217ENST00000559108 FMNL1O95466 1100 aaPredicted RBP12.65□□□□□ -0.38
TPM1-217ENST00000559108 IGHA2P01877 340 aa12.65□□□□□ -0.38
TPM1-217ENST00000559108 PGK2P07205 417 aa12.65□□□□□ -0.38
TPM1-217ENST00000559108 PTPREP23469 700 aa12.65□□□□□ -0.38
TPM1-217ENST00000559108 SMARCA1P28370 1054 aa12.65□□□□□ -0.38
TPM1-217ENST00000559108 FLT3LGP49771 235 aa12.65□□□□□ -0.38
TPM1-217ENST00000559108 FCGRTP55899 365 aa12.65□□□□□ -0.38
TPM1-217ENST00000559108 GRB14Q14449 540 aa12.65□□□□□ -0.38
TPM1-217ENST00000559108 CCL14Q16627 93 aa12.65□□□□□ -0.38
TPM1-217ENST00000559108 WDR78Q5VTH9 848 aa12.65□□□□□ -0.38
TPM1-217ENST00000559108 SLC30A10Q6XR72 485 aa12.65□□□□□ -0.38
TPM1-217ENST00000559108 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms