RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 HMGCRP04035 888 aa16.18■□□□□ 0.18
TSPAN3-205ENST00000558745 ALAS1P13196 640 aa16.18■□□□□ 0.18
TSPAN3-205ENST00000558745 ZKSCAN1P17029 563 aaPredicted RBP16.18■□□□□ 0.18
TSPAN3-205ENST00000558745 CYP2C19P33261 490 aa16.18■□□□□ 0.18
TSPAN3-205ENST00000558745 FXR1P51114 621 aaKnown RBP eCLIP16.18■□□□□ 0.18
TSPAN3-205ENST00000558745 CACNB2Q08289 660 aaPredicted RBP16.18■□□□□ 0.18
TSPAN3-205ENST00000558745 MUM1L1Q5H9M0 696 aa16.18■□□□□ 0.18
TSPAN3-205ENST00000558745 RAB11FIP4Q86YS3 637 aa16.18■□□□□ 0.18
TSPAN3-205ENST00000558745 NEK1Q96PY6 1258 aa16.18■□□□□ 0.18
TSPAN3-205ENST00000558745 MYL10Q9BUA6 226 aa16.18■□□□□ 0.18
TSPAN3-205ENST00000558745 RANBP17Q9H2T7 1088 aaKnown RBP16.18■□□□□ 0.18
TSPAN3-205ENST00000558745 LY9Q9HBG7 655 aa16.18■□□□□ 0.18
TSPAN3-205ENST00000558745 ZNFX1Q9P2E3 1918 aaKnown RBP16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 SH2B2O14492 632 aaPredicted RBP16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 HOXC6P09630 235 aa16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 PARP1P09874 1014 aaKnown RBP16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 CCND3P30281 292 aaPredicted RBP16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 MCM5P33992 734 aa16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 HSPA4P34932 840 aa16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 OAZ1P54368 228 aa16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 KCTD2Q14681 263 aa16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 SLC35G1Q2M3R5 365 aa16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 PRAMEF19Q5SWL8 479 aa16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 RNF20Q5VTR2 975 aa16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 ADGRF4Q8IZF3 695 aa16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 NUP133Q8WUM0 1156 aa16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 TRERF1Q96PN7 1200 aa16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 MAD2L2Q9UI95 211 aa16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 CCPG1Q9ULG6 757 aa16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 SNX14Q9Y5W7 946 aa16.17■□□□□ 0.18
TSPAN3-205ENST00000558745 FDX1P10109 184 aa16.16■□□□□ 0.18
TSPAN3-205ENST00000558745 PRKAR2AP13861 404 aaKnown RBP16.16■□□□□ 0.18
TSPAN3-205ENST00000558745 EXOSC10Q01780 885 aaKnown RBP16.16■□□□□ 0.18
TSPAN3-205ENST00000558745 TROAPQ12815 778 aa16.16■□□□□ 0.18
TSPAN3-205ENST00000558745 SART3Q15020 963 aaKnown RBP16.16■□□□□ 0.18
TSPAN3-205ENST00000558745 TSGA10IPQ3SY00 556 aa16.16■□□□□ 0.18
TSPAN3-205ENST00000558745 GPATCH4Q5T3I0 446 aaKnown RBP16.16■□□□□ 0.18
TSPAN3-205ENST00000558745 KCNB2Q92953 911 aa16.16■□□□□ 0.18
TSPAN3-205ENST00000558745 DDX11Q96FC9 970 aa16.16■□□□□ 0.18
TSPAN3-205ENST00000558745 USP26Q9BXU7 913 aa16.16■□□□□ 0.18
TSPAN3-205ENST00000558745 RNF146Q9NTX7 359 aa16.16■□□□□ 0.18
TSPAN3-205ENST00000558745 BRCA2P51587 3418 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 PALM3A6NDB9 673 aaPredicted RBP16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 KLRF2D3W0D1 207 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 REC8O95072 547 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 ICAM1P05362 532 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 RXRAP19793 462 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 COPB2P35606 906 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 GRM4Q14833 912 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 ZNF792Q3KQV3 632 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 ABRAQ8N0Z2 381 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 ANKRD35Q8N283 1001 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 TRPV1Q8NER1 839 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 CHST13Q8NET6 341 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 MAML3Q96JK9 1138 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 DEFB118Q96PH6 123 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 PURBQ96QR8 312 aaKnown RBP16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 JMJD4Q9H9V9 463 aa16.15■□□□□ 0.18
TSPAN3-205ENST00000558745 RPTORQ8N122 1335 aa16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 DHX16O60231 1041 aaKnown RBP16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 IGHA2P01877 340 aa16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 GJB1P08034 283 aa16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 CNTN2Q02246 1040 aa16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 CDC37Q16543 378 aaPredicted RBP16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 USH1GQ495M9 461 aa16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 ASPRV1Q53RT3 343 aa16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 MAP3K21Q5TCX8 1036 aa16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 NFXL1Q6ZNB6 911 aa16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 CATIPQ7Z7H3 387 aa16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 CCDC144CPQ8IYA2 1237 aa16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 U2AF1L4Q8WU68 220 aaKnown RBP16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 SHISA4Q96DD7 197 aa16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 JAKMIP1Q96N16 626 aaKnown RBP16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.14■□□□□ 0.174e-7■■■□□ 14.7
TSPAN3-205ENST00000558745 ACAD9Q9H845 621 aa16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 HMX1Q9NP08 348 aaPredicted RBP16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 DDX49Q9Y6V7 483 aaKnown RBP16.14■□□□□ 0.17
TSPAN3-205ENST00000558745 DLL1O00548 723 aa16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 SGPL1O95470 568 aa16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 SEC24BO95487 1268 aa16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 QRICH1Q2TAL8 776 aa16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 MFSD14CQ5VZR4 134 aa16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 NSMFQ6X4W1 530 aa16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 DHX32Q7L7V1 743 aaKnown RBP16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 TRMT44Q8IYL2 757 aaKnown RBP16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 ZNF654Q8IZM8 581 aa16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 CMTR1Q8N1G2 835 aaKnown RBP16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 PIBF1Q8WXW3 757 aa16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 TBC1D5Q92609 795 aa16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 TMEM87BQ96K49 555 aa16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 A1CFQ9NQ94 594 aaKnown RBP16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 PAK6Q9NQU5 681 aaPredicted RBP16.13■□□□□ 0.17
TSPAN3-205ENST00000558745 BAZ2BQ9UIF8 2168 aaKnown RBP16.12■□□□□ 0.17
TSPAN3-205ENST00000558745 DNAJC25-GNG10A0A024R161 153 aa16.12■□□□□ 0.17
TSPAN3-205ENST00000558745 CCDC69A6NI79 296 aa16.12■□□□□ 0.17
TSPAN3-205ENST00000558745 NFIBO00712 420 aa16.12■□□□□ 0.17
TSPAN3-205ENST00000558745 CYTH3O43739 400 aa16.12■□□□□ 0.17
TSPAN3-205ENST00000558745 TFRCP02786 760 aaKnown RBP16.12■□□□□ 0.17
TSPAN3-205ENST00000558745 GJA8P48165 433 aa16.12■□□□□ 0.17
TSPAN3-205ENST00000558745 TKFCQ3LXA3 575 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms