RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 FCER1AP12319 257 aa14.42□□□□□ -0.1
SMAD3-205ENST00000558428 XRCC5P13010 732 aaKnown RBP14.42□□□□□ -0.1
SMAD3-205ENST00000558428 ADORA2AP29274 412 aa14.42□□□□□ -0.1
SMAD3-205ENST00000558428 UBXN2AP68543 259 aa14.42□□□□□ -0.1
SMAD3-205ENST00000558428 DPP9Q86TI2 863 aa14.42□□□□□ -0.1
SMAD3-205ENST00000558428 ZNF654Q8IZM8 581 aa14.42□□□□□ -0.1
SMAD3-205ENST00000558428 ABRAQ8N0Z2 381 aa14.42□□□□□ -0.1
SMAD3-205ENST00000558428 NUP133Q8WUM0 1156 aa14.42□□□□□ -0.1
SMAD3-205ENST00000558428 ZNF333Q96JL9 665 aa14.42□□□□□ -0.1
SMAD3-205ENST00000558428 AGBL1Q96MI9 1066 aa14.42□□□□□ -0.1
SMAD3-205ENST00000558428 HOMER2Q9NSB8 354 aa14.42□□□□□ -0.1
SMAD3-205ENST00000558428 GTF3C3Q9Y5Q9 886 aa14.42□□□□□ -0.1
SMAD3-205ENST00000558428 PLXNA1Q9UIW2 1896 aa14.42□□□□□ -0.1
SMAD3-205ENST00000558428 KLRF2D3W0D1 207 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 DHX16O60231 1041 aaKnown RBP14.41□□□□□ -0.1
SMAD3-205ENST00000558428 EIF5BO60841 1220 aaKnown RBP14.41□□□□□ -0.1
SMAD3-205ENST00000558428 DDAH1O94760 285 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 ALAS1P13196 640 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 LIFRP42702 1097 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 EXOSC10Q01780 885 aaKnown RBP14.41□□□□□ -0.1
SMAD3-205ENST00000558428 TROAPQ12815 778 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 KCTD2Q14681 263 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 GRM4Q14833 912 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 BLOC1S2Q6QNY1 142 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 ADGRF4Q8IZF3 695 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 STAG2Q8N3U4 1231 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 CHST13Q8NET6 341 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 TRIB2Q92519 343 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 MYL10Q9BUA6 226 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 FBXO40Q9UH90 709 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 MAD2L2Q9UI95 211 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 CCPG1Q9ULG6 757 aa14.41□□□□□ -0.1
SMAD3-205ENST00000558428 PALM3A6NDB9 673 aaPredicted RBP14.4□□□□□ -0.1
SMAD3-205ENST00000558428 HMGCRP04035 888 aa14.4□□□□□ -0.1
SMAD3-205ENST00000558428 INHAP05111 366 aa14.4□□□□□ -0.1
SMAD3-205ENST00000558428 ICAM1P05362 532 aa14.4□□□□□ -0.1
SMAD3-205ENST00000558428 HOXC6P09630 235 aa14.4□□□□□ -0.1
SMAD3-205ENST00000558428 CPA1P15085 419 aa14.4□□□□□ -0.1
SMAD3-205ENST00000558428 CASTP20810 708 aaKnown RBP14.4□□□□□ -0.1
SMAD3-205ENST00000558428 PSMA5P28066 241 aa14.4□□□□□ -0.1
SMAD3-205ENST00000558428 CCL14Q16627 93 aa14.4□□□□□ -0.1
SMAD3-205ENST00000558428 TKFCQ3LXA3 575 aa14.4□□□□□ -0.1
SMAD3-205ENST00000558428 TRMT44Q8IYL2 757 aaKnown RBP14.4□□□□□ -0.1
SMAD3-205ENST00000558428 NPLOC4Q8TAT6 608 aa14.4□□□□□ -0.1
SMAD3-205ENST00000558428 TRERF1Q96PN7 1200 aa14.4□□□□□ -0.1
SMAD3-205ENST00000558428 ACAD9Q9H845 621 aa14.4□□□□□ -0.1
SMAD3-205ENST00000558428 VAT1LQ9HCJ6 419 aa14.4□□□□□ -0.1
SMAD3-205ENST00000558428 RNF146Q9NTX7 359 aa14.4□□□□□ -0.1
SMAD3-205ENST00000558428 SLC5A4Q9NY91 659 aa14.4□□□□□ -0.1
SMAD3-205ENST00000558428 COBLO75128 1261 aa14.39□□□□□ -0.11
SMAD3-205ENST00000558428 PGK2P07205 417 aa14.39□□□□□ -0.11
SMAD3-205ENST00000558428 TAL1P17542 331 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-205ENST00000558428 FGD1P98174 961 aa14.39□□□□□ -0.11
SMAD3-205ENST00000558428 MTFR1Q15390 333 aa14.39□□□□□ -0.11
SMAD3-205ENST00000558428 CDC37Q16543 378 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-205ENST00000558428 IFFO2Q5TF58 517 aa14.39□□□□□ -0.11
SMAD3-205ENST00000558428 SGMS1Q86VZ5 419 aa14.39□□□□□ -0.11
SMAD3-205ENST00000558428 ANKRD35Q8N283 1001 aa14.39□□□□□ -0.11
SMAD3-205ENST00000558428 CTCFLQ8NI51 663 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-205ENST00000558428 DDX11Q96FC9 970 aa14.39□□□□□ -0.11
SMAD3-205ENST00000558428 TMEM106CQ9BVX2 250 aa14.39□□□□□ -0.11
SMAD3-205ENST00000558428 SLC12A7Q9Y666 1083 aa14.39□□□□□ -0.11
SMAD3-205ENST00000558428 CALM1P0DP23 149 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 CALM2P0DP24 149 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 CALM3P0DP25 149 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 RXRAP19793 462 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 RPS6KB1P23443 525 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 KIF5BP33176 963 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 SOX10P56693 466 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 TRIM32Q13049 653 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 MUM1L1Q5H9M0 696 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 SYNE3Q6ZMZ3 975 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 Q6ZUG5 572 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMAD3-205ENST00000558428 RAB11FIP4Q86YS3 637 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 MAP3K14Q99558 947 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 JMJD4Q9H9V9 463 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 FLRT1Q9NZU1 646 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 PNMA2Q9UL42 364 aa14.38□□□□□ -0.11
SMAD3-205ENST00000558428 SEC24BO95487 1268 aa14.37□□□□□ -0.11
SMAD3-205ENST00000558428 CCL5P13501 91 aa14.37□□□□□ -0.11
SMAD3-205ENST00000558428 QRICH1Q2TAL8 776 aa14.37□□□□□ -0.11
SMAD3-205ENST00000558428 ZNF792Q3KQV3 632 aa14.37□□□□□ -0.11
SMAD3-205ENST00000558428 USH1GQ495M9 461 aa14.37□□□□□ -0.11
SMAD3-205ENST00000558428 C8orf34Q49A92 452 aa14.37□□□□□ -0.11
SMAD3-205ENST00000558428 MFSD14CQ5VZR4 134 aa14.37□□□□□ -0.11
SMAD3-205ENST00000558428 APOA5Q6Q788 366 aa14.37□□□□□ -0.11
SMAD3-205ENST00000558428 MICU3Q86XE3 530 aa14.37□□□□□ -0.11
SMAD3-205ENST00000558428 CCDC144CPQ8IYA2 1237 aa14.37□□□□□ -0.11
SMAD3-205ENST00000558428 RNF208Q9H0X6 261 aa14.37□□□□□ -0.11
SMAD3-205ENST00000558428 UNC93B1Q9H1C4 597 aa14.37□□□□□ -0.11
SMAD3-205ENST00000558428 A1CFQ9NQ94 594 aaKnown RBP14.37□□□□□ -0.11
SMAD3-205ENST00000558428 RBBP6Q7Z6E9 1792 aaKnown RBP14.37□□□□□ -0.11
SMAD3-205ENST00000558428 MCM3APO60318 1980 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 PRKAR2AP13861 404 aaKnown RBP14.36□□□□□ -0.11
SMAD3-205ENST00000558428 GNAQP50148 359 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 SLC35G1Q2M3R5 365 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 OLFML2BQ68BL8 750 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 NSMFQ6X4W1 530 aa14.36□□□□□ -0.11
SMAD3-205ENST00000558428 RUFY3Q7L099 469 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms