RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 INTS13Q9NVM9 706 aa12.19□□□□□ -0.46
SEMA4B-204ENST00000558065 PRELID1Q9Y255 219 aa12.19□□□□□ -0.46
SEMA4B-204ENST00000558065 NUP153P49790 1475 aaKnown RBP12.19□□□□□ -0.46
SEMA4B-204ENST00000558065 KDM6AO15550 1401 aaPredicted RBP12.19□□□□□ -0.46
SEMA4B-204ENST00000558065 TACC1O75410 805 aa12.19□□□□□ -0.46
SEMA4B-204ENST00000558065 BBOX1O75936 387 aa12.19□□□□□ -0.46
SEMA4B-204ENST00000558065 LMOD1P29536 600 aaPredicted RBP12.19□□□□□ -0.46
SEMA4B-204ENST00000558065 LARP1BQ659C4 914 aaKnown RBP12.19□□□□□ -0.46
SEMA4B-204ENST00000558065 WDR60Q8WVS4 1066 aa12.19□□□□□ -0.46
SEMA4B-204ENST00000558065 SREK1Q8WXA9 508 aaKnown RBP12.19□□□□□ -0.46
SEMA4B-204ENST00000558065 PTPRN2Q92932 1015 aa12.19□□□□□ -0.46
SEMA4B-204ENST00000558065 EXOC1Q9NV70 894 aa12.19□□□□□ -0.46
SEMA4B-204ENST00000558065 CHMP2BQ9UQN3 213 aa12.19□□□□□ -0.46
SEMA4B-204ENST00000558065 ABCC4O15439 1325 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 MAGI1Q96QZ7 1491 aaPredicted RBP12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 MAP4K4O95819 1239 aaPredicted RBP12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 TOP1P11387 765 aaKnown RBP12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 ATP6V1C1P21283 382 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 CFAP157Q5JU67 520 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 LMNTD2Q8IXW0 634 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 HAPLN3Q96S86 360 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 SUCLA2Q9P2R7 463 aaPredicted RBP12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 SNX14Q9Y5W7 946 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 EFCAB6Q5THR3 1501 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 MCL1Q07820 350 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 LSAMPQ13449 338 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 TBC1D1Q86TI0 1168 aaPredicted RBP12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 CCDC125Q86Z20 511 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 OSCARQ8IYS5 282 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 CLASRPQ8N2M8 674 aaKnown RBP12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 VCX3BQ9H321 246 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 VCX3AQ9NNX9 186 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 TTLL3Q9Y4R7 772 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 SLC4A7Q9Y6M7 1214 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 PNPLA6Q8IY17 1366 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 NR1D1P20393 614 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 NEPROQ6NW34 567 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 UBE3BQ7Z3V4 1068 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 DAAM2Q86T65 1068 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 BPHLQ86WA6 291 aaPredicted RBP12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 NACAP1Q9BZK3 213 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 RMND1Q9NWS8 449 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 ADGRG1Q9Y653 693 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 CD109Q6YHK3 1445 aa12.18□□□□□ -0.46
SEMA4B-204ENST00000558065 NEDD4P46934 1319 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 GSTA1P08263 222 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 GNAZP19086 355 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 UBASH3AP57075 661 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 DDB1Q16531 1140 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 WDR75Q8IWA0 830 aaKnown RBP12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 ANKRD44Q8N8A2 993 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 KRI1Q8N9T8 703 aaKnown RBP12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 WDR66Q8TBY9 1149 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 NAPGQ99747 312 aaPredicted RBP12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 CFAP73A6NFT4 308 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 KRT14P02533 472 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 PDE6CP51160 858 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 SND1Q7KZF4 910 aaKnown RBP eCLIP12.17□□□□□ -0.466e-7■■□□□ 14.4
SEMA4B-204ENST00000558065 CATIPQ7Z7H3 387 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 TMCO5AQ8N6Q1 288 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 FAM136AQ96C01 138 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 TCHPQ9BT92 498 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 CCDC68Q9H2F9 335 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 SYNCQ9H7C4 482 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 PPANQ9NQ55 473 aaKnown RBP12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 ITIH6Q6UXX5 1313 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 KAT6BQ8WYB5 2073 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 A8MUI8 341 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 ALDH5A1P51649 535 aaPredicted RBP12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 PDE1AP54750 535 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 NLRP5P59047 1200 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 MTX1Q13505 466 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 SLC44A4Q53GD3 710 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 ZNF713Q8N859 430 aaPredicted RBP12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 DDX12PQ92771 950 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 NEK1Q96PY6 1258 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 SEZ6LQ9BYH1 1024 aa12.17□□□□□ -0.46
SEMA4B-204ENST00000558065 A2MP01023 1474 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 GMNCA6NCL1 334 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 TRAPPC3O43617 180 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 FGFR1OPO95684 399 aaKnown RBP12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 BAG3O95817 575 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 BDNFP23560 247 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 MTTPP55157 894 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 CNPY1Q3B7I2 92 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 NAA16Q6N069 864 aaPredicted RBP12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 CACNA2D3Q8IZS8 1091 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 MYO1HQ8N1T3 1032 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 CEP295NLQ96MC4 621 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 PFDN4Q9NQP4 134 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 ADAM22Q9P0K1 906 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 BCL9O00512 1426 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 GPATCH8Q9UKJ3 1502 aaKnown RBP12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 RGL2O15211 777 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 GSTT2P0CG29 244 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 GSTT2BP0CG30 244 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 CPA1P15085 419 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 LRP8Q14114 963 aa12.16□□□□□ -0.46
SEMA4B-204ENST00000558065 PPP4R3AQ6IN85 833 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms