RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 DDX4Q9NQI0 724 aaKnown RBP12.8□□□□□ -0.36
SRP54-205ENST00000554803 KCND1Q9NSA2 647 aa12.8□□□□□ -0.36
SRP54-205ENST00000554803 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
SRP54-205ENST00000554803 RCOR1Q9UKL0 485 aa12.8□□□□□ -0.36
SRP54-205ENST00000554803 HCN4Q9Y3Q4 1203 aa12.8□□□□□ -0.36
SRP54-205ENST00000554803 PDS5AQ29RF7 1337 aaKnown RBP12.8□□□□□ -0.36
SRP54-205ENST00000554803 WDR19Q8NEZ3 1342 aa12.8□□□□□ -0.36
SRP54-205ENST00000554803 MYH15Q9Y2K3 1946 aa12.8□□□□□ -0.36
SRP54-205ENST00000554803 XIRP2A4UGR9 3374 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 TRIM43BA6NCK2 446 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 GOLGA6L19H0YKK7 550 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 ERVK-9P63128 1117 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 ERVK-24P63145 666 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 MAP2K5Q13163 448 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 Q3C1V9 767 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 MFSD14CQ5VZR4 134 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 CCDC73Q6ZRK6 1079 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 SH3RF1Q7Z6J0 888 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 PLEKHH3Q7Z736 793 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 PPM1EQ8WY54 764 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 TRIM43Q96BQ3 446 aaPredicted RBP12.79□□□□□ -0.36
SRP54-205ENST00000554803 FEZ1Q99689 392 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 PORCNQ9H237 461 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 DACT1Q9NYF0 836 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 RBPJLQ9UBG7 517 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 GAKO14976 1311 aa12.79□□□□□ -0.36
SRP54-205ENST00000554803 CHD7Q9P2D1 2997 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 TRANK1O15050 2925 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.78□□□□□ -0.36
SRP54-205ENST00000554803 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.78□□□□□ -0.36
SRP54-205ENST00000554803 FAM196BA6NMK8 535 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 SMTNL1A8MU46 457 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 USP17L5A8MUK1 530 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 CTIFO43310 598 aaKnown RBP12.78□□□□□ -0.36
SRP54-205ENST00000554803 NRDCO43847 1150 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 IDH1O75874 414 aaKnown RBP12.78□□□□□ -0.36
SRP54-205ENST00000554803 ZNF165P49910 485 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 ZNF75DP51815 510 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 EVCP57679 992 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 GSDMDP57764 484 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 PICALMQ13492 652 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 TTF1Q15361 905 aaPredicted RBP12.78□□□□□ -0.36
SRP54-205ENST00000554803 FOXD4L6Q3SYB3 417 aaPredicted RBP12.78□□□□□ -0.36
SRP54-205ENST00000554803 TRIM60Q495X7 471 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 GJC2Q5T442 439 aaPredicted RBP12.78□□□□□ -0.36
SRP54-205ENST00000554803 SPTY2D1Q68D10 685 aaPredicted RBP12.78□□□□□ -0.36
SRP54-205ENST00000554803 POTEEQ6S8J3 1075 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 FOXD4L3Q6VB84 417 aaPredicted RBP12.78□□□□□ -0.36
SRP54-205ENST00000554803 NECAB1Q8N987 351 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 BICD2Q8TD16 824 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 ZNF384Q8TF68 577 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 SEC62Q99442 399 aaKnown RBP12.78□□□□□ -0.36
SRP54-205ENST00000554803 TTC12Q9H892 705 aaPredicted RBP12.78□□□□□ -0.36
SRP54-205ENST00000554803 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.78□□□□□ -0.36
SRP54-205ENST00000554803 AS3MTQ9HBK9 375 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 ANO10Q9NW15 660 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 FLRT1Q9NZU1 646 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 ABCF2Q9UG63 623 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
SRP54-205ENST00000554803 ZNF236Q9UL36 1845 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 A0A1W2PQ27 194 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 A0A1W2PQ64 194 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 A0A1W2PQD8 194 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 RNF113AO15541 343 aaKnown RBP12.77□□□□□ -0.37
SRP54-205ENST00000554803 CPA1P15085 419 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 PDE6AP16499 860 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 CNGA1P29973 690 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 CAP2P40123 477 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 KCNJ6P48051 423 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 EPHB4P54760 987 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 ANO6Q4KMQ2 910 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 UTP14CQ5TAP6 766 aaKnown RBP12.77□□□□□ -0.37
SRP54-205ENST00000554803 C1orf53Q5VUE5 145 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 CCAR1Q8IX12 1150 aaKnown RBP12.77□□□□□ -0.37
SRP54-205ENST00000554803 ARRDC4Q8NCT1 418 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 GTF3C2Q8WUA4 911 aaPredicted RBP12.77□□□□□ -0.37
SRP54-205ENST00000554803 TIFAQ96CG3 184 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 BPIFA3Q9BQP9 254 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 LRFN3Q9BTN0 628 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 CBX8Q9HC52 389 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 IMPACTQ9P2X3 320 aa12.77□□□□□ -0.37
SRP54-205ENST00000554803 ZNFX1Q9P2E3 1918 aaKnown RBP12.77□□□□□ -0.37
SRP54-205ENST00000554803 BAZ2AQ9UIF9 1905 aaKnown RBP12.77□□□□□ -0.37
SRP54-205ENST00000554803 LAMA4Q16363 1823 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 TCRBV5S4A2TA0A5A2 114 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 KBTBD13C9JR72 458 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 KINO60870 393 aaKnown RBP12.76□□□□□ -0.37
SRP54-205ENST00000554803 LIG1P18858 919 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 ADD2P35612 726 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 TPM4P67936 248 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 FGD1P98174 961 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 FAM160A1Q05DH4 1040 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 ZMYM1Q5SVZ6 1142 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 SLC9C2Q5TAH2 1124 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 CCDC129Q6ZRS4 1044 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 BRAPQ7Z569 592 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 ZNF589Q86UQ0 364 aaPredicted RBP12.76□□□□□ -0.37
SRP54-205ENST00000554803 CEP57L1Q8IYX8 460 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 MAGEB6Q8N7X4 407 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 BRF1Q92994 677 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms