RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 PKP1Q13835 747 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 QRICH1Q2TAL8 776 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 WWC2Q6AWC2 1192 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 MCTP1Q6DN14 999 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 CATSPERGQ6ZRH7 1159 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 FBXO11Q86XK2 927 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 TEX2Q8IWB9 1127 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 ZNF784Q8NCA9 323 aaPredicted RBP16.54■□□□□ 0.24
SHOX2-206ENST00000554685 HOXC10Q9NYD6 342 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 VPS54Q9P1Q0 977 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 AGTPBP1Q9UPW5 1226 aa16.54■□□□□ 0.24
SHOX2-206ENST00000554685 ESYT2A0FGR8 921 aa16.53■□□□□ 0.24
SHOX2-206ENST00000554685 TMEM88BA6NKF7 163 aa16.53■□□□□ 0.24
SHOX2-206ENST00000554685 STXBP3O00186 592 aa16.53■□□□□ 0.24
SHOX2-206ENST00000554685 ZBED4O75132 1171 aa16.53■□□□□ 0.24
SHOX2-206ENST00000554685 GNA11P29992 359 aa16.53■□□□□ 0.24
SHOX2-206ENST00000554685 HOXA7P31268 230 aaPredicted RBP16.53■□□□□ 0.24
SHOX2-206ENST00000554685 COG2Q14746 738 aa16.53■□□□□ 0.24
SHOX2-206ENST00000554685 SPRYD7Q5W111 196 aa16.53■□□□□ 0.24
SHOX2-206ENST00000554685 BRAPQ7Z569 592 aa16.53■□□□□ 0.24
SHOX2-206ENST00000554685 BICD2Q8TD16 824 aa16.53■□□□□ 0.24
SHOX2-206ENST00000554685 GPKOWQ92917 476 aaPredicted RBP eCLIP16.53■□□□□ 0.24
SHOX2-206ENST00000554685 HHIPL1Q96JK4 782 aa16.53■□□□□ 0.24
SHOX2-206ENST00000554685 PHF20Q9BVI0 1012 aa16.53■□□□□ 0.24
SHOX2-206ENST00000554685 C6orf50Q9HD87 102 aa16.53■□□□□ 0.24
SHOX2-206ENST00000554685 TLL2Q9Y6L7 1015 aa16.53■□□□□ 0.24
SHOX2-206ENST00000554685 LOC285556D6RIA3 1793 aa16.52■□□□□ 0.24
SHOX2-206ENST00000554685 OSBPP22059 807 aa16.52■□□□□ 0.24
SHOX2-206ENST00000554685 KRT2P35908 639 aa16.52■□□□□ 0.24
SHOX2-206ENST00000554685 GJA5P36382 358 aa16.52■□□□□ 0.24
SHOX2-206ENST00000554685 ZNF157P51786 506 aaPredicted RBP16.52■□□□□ 0.24
SHOX2-206ENST00000554685 IRX3P78415 501 aaPredicted RBP16.52■□□□□ 0.24
SHOX2-206ENST00000554685 DGKZQ13574 1117 aa16.52■□□□□ 0.24
SHOX2-206ENST00000554685 RGMBQ6NW40 437 aa16.52■□□□□ 0.24
SHOX2-206ENST00000554685 SAPCD2Q86UD0 394 aa16.52■□□□□ 0.24
SHOX2-206ENST00000554685 DAGLBQ8NCG7 672 aa16.52■□□□□ 0.24
SHOX2-206ENST00000554685 FOXP1Q9H334 677 aaPredicted RBP16.52■□□□□ 0.24
SHOX2-206ENST00000554685 FBXO28Q9NVF7 368 aa16.52■□□□□ 0.24
SHOX2-206ENST00000554685 PNMA3Q9UL41 463 aa16.52■□□□□ 0.24
SHOX2-206ENST00000554685 ZDHHC9Q9Y397 364 aa16.52■□□□□ 0.24
SHOX2-206ENST00000554685 MYH6P13533 1939 aa16.51■□□□□ 0.23
SHOX2-206ENST00000554685 OAZ1P54368 228 aa16.51■□□□□ 0.23
SHOX2-206ENST00000554685 KIF23Q02241 960 aaPredicted RBP16.51■□□□□ 0.23
SHOX2-206ENST00000554685 RESTQ13127 1097 aa16.51■□□□□ 0.23
SHOX2-206ENST00000554685 OTUD7BQ6GQQ9 843 aa16.51■□□□□ 0.23
SHOX2-206ENST00000554685 DIS3L2Q8IYB7 885 aaKnown RBP16.51■□□□□ 0.23
SHOX2-206ENST00000554685 MB21D1Q8N884 522 aa16.51■□□□□ 0.23
SHOX2-206ENST00000554685 CCDC102AQ96A19 550 aa16.51■□□□□ 0.23
SHOX2-206ENST00000554685 GBP4Q96PP9 640 aa16.51■□□□□ 0.23
SHOX2-206ENST00000554685 ZMYND12Q9H0C1 365 aa16.51■□□□□ 0.23
SHOX2-206ENST00000554685 SLC38A10Q9HBR0 1119 aa16.51■□□□□ 0.23
SHOX2-206ENST00000554685 PCDHA4Q9UN74 947 aa16.51■□□□□ 0.23
SHOX2-206ENST00000554685 KCNJ14Q9UNX9 436 aa16.51■□□□□ 0.23
SHOX2-206ENST00000554685 SLC45A1Q9Y2W3 748 aa16.51■□□□□ 0.23
SHOX2-206ENST00000554685 PCDHA1Q9Y5I3 950 aa16.51■□□□□ 0.23
SHOX2-206ENST00000554685 ABCB11O95342 1321 aa16.5■□□□□ 0.23
SHOX2-206ENST00000554685 ICAM1P05362 532 aa16.5■□□□□ 0.23
SHOX2-206ENST00000554685 ADCY7P51828 1080 aa16.5■□□□□ 0.23
SHOX2-206ENST00000554685 MRPL12P52815 198 aaKnown RBP16.5■□□□□ 0.23
SHOX2-206ENST00000554685 FOXD4L5Q5VV16 416 aaPredicted RBP16.5■□□□□ 0.23
SHOX2-206ENST00000554685 MCTP2Q6DN12 878 aa16.5■□□□□ 0.23
SHOX2-206ENST00000554685 CCDC174Q6PII3 467 aa16.5■□□□□ 0.23
SHOX2-206ENST00000554685 RASAL3Q86YV0 1011 aa16.5■□□□□ 0.23
SHOX2-206ENST00000554685 BLIDQ8IZY5 108 aa16.5■□□□□ 0.23
SHOX2-206ENST00000554685 GTF3C2Q8WUA4 911 aaPredicted RBP16.5■□□□□ 0.23
SHOX2-206ENST00000554685 FOXD4L4Q8WXT5 416 aaPredicted RBP16.5■□□□□ 0.23
SHOX2-206ENST00000554685 TNPO1Q92973 898 aaKnown RBP16.5■□□□□ 0.23
SHOX2-206ENST00000554685 COA7Q96BR5 231 aa16.5■□□□□ 0.23
SHOX2-206ENST00000554685 GJB4Q9NTQ9 266 aa16.5■□□□□ 0.23
SHOX2-206ENST00000554685 ABT1Q9ULW3 272 aaKnown RBP16.5■□□□□ 0.23
SHOX2-206ENST00000554685 ADAMTS5Q9UNA0 930 aa16.5■□□□□ 0.23
SHOX2-206ENST00000554685 MRPL11Q9Y3B7 192 aaKnown RBP16.5■□□□□ 0.23
SHOX2-206ENST00000554685 CCL15-CCL14A0A0B4J2E2 113 aa16.49■□□□□ 0.23
SHOX2-206ENST00000554685 SMCO2A6NFE2 343 aa16.49■□□□□ 0.23
SHOX2-206ENST00000554685 MANSC4A6NHS7 340 aaPredicted RBP16.49■□□□□ 0.23
SHOX2-206ENST00000554685 VWA5AO00534 786 aa16.49■□□□□ 0.23
SHOX2-206ENST00000554685 PPP1R11O60927 126 aaPredicted RBP16.49■□□□□ 0.23
SHOX2-206ENST00000554685 U2AF2P26368 475 aaKnown RBP eCLIP16.49■□□□□ 0.23
SHOX2-206ENST00000554685 CCL15Q16663 113 aa16.49■□□□□ 0.23
SHOX2-206ENST00000554685 TREML2Q5T2D2 321 aa16.49■□□□□ 0.23
SHOX2-206ENST00000554685 ATL3Q6DD88 541 aa16.49■□□□□ 0.23
SHOX2-206ENST00000554685 ANKRD23Q86SG2 305 aa16.49■□□□□ 0.23
SHOX2-206ENST00000554685 FERMT3Q86UX7 667 aa16.49■□□□□ 0.23
SHOX2-206ENST00000554685 CUL5Q93034 780 aa16.49■□□□□ 0.23
SHOX2-206ENST00000554685 ATG4CQ96DT6 458 aa16.49■□□□□ 0.23
SHOX2-206ENST00000554685 MS4A4AQ96JQ5 239 aa16.49■□□□□ 0.23
SHOX2-206ENST00000554685 CCPG1Q9ULG6 757 aa16.49■□□□□ 0.23
SHOX2-206ENST00000554685 PTPRFP10586 1907 aa16.49■□□□□ 0.23
SHOX2-206ENST00000554685 SPDYE16A6NNV3 312 aaPredicted RBP16.48■□□□□ 0.23
SHOX2-206ENST00000554685 SLC10A3P09131 477 aa16.48■□□□□ 0.23
SHOX2-206ENST00000554685 MOGSQ13724 837 aa16.48■□□□□ 0.23
SHOX2-206ENST00000554685 USH1GQ495M9 461 aa16.48■□□□□ 0.23
SHOX2-206ENST00000554685 TYW1BQ6NUM6 668 aa16.48■□□□□ 0.23
SHOX2-206ENST00000554685 LBX2Q6XYB7 198 aa16.48■□□□□ 0.23
SHOX2-206ENST00000554685 NOSTRINQ8IVI9 506 aa16.48■□□□□ 0.23
SHOX2-206ENST00000554685 ZNF396Q96N95 335 aaPredicted RBP16.48■□□□□ 0.23
SHOX2-206ENST00000554685 RIC8AQ9NPQ8 531 aa16.48■□□□□ 0.23
SHOX2-206ENST00000554685 BTBD18B2RXH4 712 aa16.47■□□□□ 0.23
SHOX2-206ENST00000554685 ATP2A1O14983 1001 aa16.47■□□□□ 0.23
SHOX2-206ENST00000554685 INHBEP58166 350 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms