RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 SYDE2Q5VT97 1194 aa13.62□□□□□ -0.23
TMEM253-203ENST00000554329 TICAM2Q86XR7 235 aa13.62□□□□□ -0.23
TMEM253-203ENST00000554329 ANKRD35Q8N283 1001 aa13.62□□□□□ -0.23
TMEM253-203ENST00000554329 PNMA1Q8ND90 353 aa13.62□□□□□ -0.23
TMEM253-203ENST00000554329 DCAF4Q8WV16 495 aa13.62□□□□□ -0.23
TMEM253-203ENST00000554329 RUFY2Q8WXA3 655 aa13.62□□□□□ -0.23
TMEM253-203ENST00000554329 DDX11Q96FC9 970 aa13.62□□□□□ -0.23
TMEM253-203ENST00000554329 FGD4Q96M96 766 aa13.62□□□□□ -0.23
TMEM253-203ENST00000554329 ESYT1Q9BSJ8 1104 aa13.62□□□□□ -0.23
TMEM253-203ENST00000554329 LSG1Q9H089 658 aaKnown RBP13.62□□□□□ -0.23
TMEM253-203ENST00000554329 TCP11L1Q9NUJ3 509 aa13.62□□□□□ -0.23
TMEM253-203ENST00000554329 CTNNA3Q9UI47 895 aa13.62□□□□□ -0.23
TMEM253-203ENST00000554329 STRNO43815 780 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 NEFLP07196 543 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 ZNF543Q08ER8 600 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 USH1GQ495M9 461 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 GJC2Q5T442 439 aaPredicted RBP13.61□□□□□ -0.23
TMEM253-203ENST00000554329 FAM160B2Q86V87 743 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 RAB11FIP4Q86YS3 637 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 STAG2Q8N3U4 1231 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 CHURC1Q8WUH1 139 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 TRERF1Q96PN7 1200 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 LRRC2Q9BYS8 371 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 KAT14Q9H8E8 782 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 VAT1LQ9HCJ6 419 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 ANO2Q9NQ90 1003 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 CCPG1Q9ULG6 757 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 PFASO15067 1338 aa13.61□□□□□ -0.23
TMEM253-203ENST00000554329 H0YGN5 161 aa13.6□□□□□ -0.23
TMEM253-203ENST00000554329 NFIBO00712 420 aa13.6□□□□□ -0.23
TMEM253-203ENST00000554329 IGHA2P01877 340 aa13.6□□□□□ -0.23
TMEM253-203ENST00000554329 ANTXR2P58335 489 aa13.6□□□□□ -0.23
TMEM253-203ENST00000554329 NSMFQ6X4W1 530 aa13.6□□□□□ -0.23
TMEM253-203ENST00000554329 IQCA1Q86XH1 822 aa13.6□□□□□ -0.23
TMEM253-203ENST00000554329 TRMT44Q8IYL2 757 aaKnown RBP13.6□□□□□ -0.23
TMEM253-203ENST00000554329 MAP4K1Q92918 833 aa13.6□□□□□ -0.23
TMEM253-203ENST00000554329 UBAC1Q9BSL1 405 aa13.6□□□□□ -0.23
TMEM253-203ENST00000554329 RANBP17Q9H2T7 1088 aaKnown RBP13.6□□□□□ -0.23
TMEM253-203ENST00000554329 A1CFQ9NQ94 594 aaKnown RBP13.6□□□□□ -0.23
TMEM253-203ENST00000554329 DDX20Q9UHI6 824 aaKnown RBP13.6□□□□□ -0.23
TMEM253-203ENST00000554329 OGDHLQ9ULD0 1010 aa13.6□□□□□ -0.23
TMEM253-203ENST00000554329 SYNPO2Q9UMS6 1093 aa13.6□□□□□ -0.23
TMEM253-203ENST00000554329 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
TMEM253-203ENST00000554329 ASTN1O14525 1302 aa13.6□□□□□ -0.23
TMEM253-203ENST00000554329 MYH6P13533 1939 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 ADCY6O43306 1168 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
TMEM253-203ENST00000554329 SEC23AQ15436 765 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 TMEM63BQ5T3F8 832 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 IFIT1BQ5T764 474 aaKnown RBP13.59□□□□□ -0.23
TMEM253-203ENST00000554329 PRPF38BQ5VTL8 546 aaKnown RBP13.59□□□□□ -0.23
TMEM253-203ENST00000554329 OLFML2BQ68BL8 750 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 SLC30A10Q6XR72 485 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 EEPD1Q7L9B9 569 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 C7orf61Q8IZ16 206 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 ABRAQ8N0Z2 381 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 PIBF1Q8WXW3 757 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 TINF2Q9BSI4 451 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 MYL10Q9BUA6 226 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 KRT23Q9C075 422 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 ACAD9Q9H845 621 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 ZHX1Q9UKY1 873 aaPredicted RBP13.59□□□□□ -0.23
TMEM253-203ENST00000554329 GTF3C3Q9Y5Q9 886 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 LRRC37A2A6NM11 1700 aa13.59□□□□□ -0.23
TMEM253-203ENST00000554329 DNAJC25-GNG10A0A024R161 153 aa13.58□□□□□ -0.24
TMEM253-203ENST00000554329 SOWAHBA6NEL2 793 aa13.58□□□□□ -0.24
TMEM253-203ENST00000554329 IFIT3O14879 490 aaKnown RBP13.58□□□□□ -0.24
TMEM253-203ENST00000554329 SLC27A2O14975 620 aa13.58□□□□□ -0.24
TMEM253-203ENST00000554329 ATP2A1O14983 1001 aa13.58□□□□□ -0.24
TMEM253-203ENST00000554329 DHX16O60231 1041 aaKnown RBP13.58□□□□□ -0.24
TMEM253-203ENST00000554329 SNAI1O95863 264 aaPredicted RBP13.58□□□□□ -0.24
TMEM253-203ENST00000554329 SNHG28P0DPA3 235 aa13.58□□□□□ -0.24
TMEM253-203ENST00000554329 PCP11498 1178 aaKnown RBP13.58□□□□□ -0.24
TMEM253-203ENST00000554329 SYN1P17600 705 aa13.58□□□□□ -0.24
TMEM253-203ENST00000554329 BMP2KLQ5H9B9 411 aa13.58□□□□□ -0.24
TMEM253-203ENST00000554329 PPP4R3BQ5MIZ7 849 aa13.58□□□□□ -0.24
TMEM253-203ENST00000554329 NECAB2Q7Z6G3 386 aa13.58□□□□□ -0.24
TMEM253-203ENST00000554329 TCEANC2Q96MN5 208 aa13.58□□□□□ -0.24
TMEM253-203ENST00000554329 C11orf49Q9H6J7 331 aa13.58□□□□□ -0.24
TMEM253-203ENST00000554329 ZMYND8Q9ULU4 1186 aaPredicted RBP13.58□□□□□ -0.24
TMEM253-203ENST00000554329 POTEB2H3BUK9 544 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 PGK1P00558 417 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 ZNF865P0CJ78 1059 aaPredicted RBP13.57□□□□□ -0.24
TMEM253-203ENST00000554329 RXRAP19793 462 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 TRDNQ13061 729 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 SLC35G1Q2M3R5 365 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 CREB3L3Q68CJ9 461 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 BTNL9Q6UXG8 535 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 KIAA1211Q6ZU35 1233 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 RALYLQ86SE5 291 aaKnown RBP13.57□□□□□ -0.24
TMEM253-203ENST00000554329 DGKHQ86XP1 1220 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 CCDC144CPQ8IYA2 1237 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 MB21D2Q8IYB1 491 aaPredicted RBP13.57□□□□□ -0.24
TMEM253-203ENST00000554329 ADGRF4Q8IZF3 695 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 CHST13Q8NET6 341 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 TBC1D5Q92609 795 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 FERMT2Q96AC1 680 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 TTC14Q96N46 770 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 CNNM2Q9H8M5 875 aa13.57□□□□□ -0.24
TMEM253-203ENST00000554329 SLC5A4Q9NY91 659 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms