RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 COLQQ9Y215 455 aaPredicted RBP12.82□□□□□ -0.36
TMEM116-215ENST00000552374 CNPY2Q9Y2B0 182 aa12.82□□□□□ -0.36
TMEM116-215ENST00000552374 ZNF536O15090 1300 aa12.82□□□□□ -0.36
TMEM116-215ENST00000552374 DNAJC25-GNG10A0A024R161 153 aa12.81□□□□□ -0.36
TMEM116-215ENST00000552374 SGSM2O43147 1006 aa12.81□□□□□ -0.36
TMEM116-215ENST00000552374 GOLGA8HP0CJ92 632 aa12.81□□□□□ -0.36
TMEM116-215ENST00000552374 TKFCQ3LXA3 575 aa12.81□□□□□ -0.36
TMEM116-215ENST00000552374 BTNL9Q6UXG8 535 aa12.81□□□□□ -0.36
TMEM116-215ENST00000552374 CENPQQ7L2Z9 268 aaPredicted RBP12.81□□□□□ -0.36
TMEM116-215ENST00000552374 PNMA1Q8ND90 353 aa12.81□□□□□ -0.36
TMEM116-215ENST00000552374 CNNM2Q9H8M5 875 aa12.81□□□□□ -0.36
TMEM116-215ENST00000552374 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
TMEM116-215ENST00000552374 GREB1LQ9C091 1923 aaPredicted RBP12.81□□□□□ -0.36
TMEM116-215ENST00000552374 RAD50Q92878 1312 aa12.81□□□□□ -0.36
TMEM116-215ENST00000552374 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
TMEM116-215ENST00000552374 SNAI1O95863 264 aaPredicted RBP12.8□□□□□ -0.36
TMEM116-215ENST00000552374 NT5C2P49902 561 aa12.8□□□□□ -0.36
TMEM116-215ENST00000552374 CNTN2Q02246 1040 aa12.8□□□□□ -0.36
TMEM116-215ENST00000552374 ZNF543Q08ER8 600 aa12.8□□□□□ -0.36
TMEM116-215ENST00000552374 TRDNQ13061 729 aa12.8□□□□□ -0.36
TMEM116-215ENST00000552374 MUM1L1Q5H9M0 696 aa12.8□□□□□ -0.36
TMEM116-215ENST00000552374 CHRDL2Q6WN34 429 aa12.8□□□□□ -0.36
TMEM116-215ENST00000552374 KIAA1211Q6ZU35 1233 aa12.8□□□□□ -0.36
TMEM116-215ENST00000552374 C7orf61Q8IZ16 206 aa12.8□□□□□ -0.36
TMEM116-215ENST00000552374 MSL3Q8N5Y2 521 aaKnown RBP12.8□□□□□ -0.36
TMEM116-215ENST00000552374 ENAHQ8N8S7 591 aaPredicted RBP12.8□□□□□ -0.36
TMEM116-215ENST00000552374 UBAC1Q9BSL1 405 aa12.8□□□□□ -0.36
TMEM116-215ENST00000552374 UBA5Q9GZZ9 404 aa12.8□□□□□ -0.36
TMEM116-215ENST00000552374 NRBP1Q9UHY1 535 aa12.8□□□□□ -0.36
TMEM116-215ENST00000552374 PFASO15067 1338 aa12.8□□□□□ -0.36
TMEM116-215ENST00000552374 CEP290O15078 2479 aa12.8□□□□□ -0.36
TMEM116-215ENST00000552374 DNM1LO00429 736 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 ICAM1P05362 532 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 CYP21A2P08686 494 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 ZNF865P0CJ78 1059 aaPredicted RBP12.79□□□□□ -0.36
TMEM116-215ENST00000552374 RARBP10826 455 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 COL6A1P12109 1028 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 ATN1P54259 1190 aaPredicted RBP12.79□□□□□ -0.36
TMEM116-215ENST00000552374 LRRC26Q2I0M4 334 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 HABP4Q5JVS0 413 aaKnown RBP12.79□□□□□ -0.36
TMEM116-215ENST00000552374 NSMFQ6X4W1 530 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 ANKS1AQ92625 1134 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 RANBP17Q9H2T7 1088 aaKnown RBP12.79□□□□□ -0.36
TMEM116-215ENST00000552374 CPVLQ9H3G5 476 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 A1CFQ9NQ94 594 aaKnown RBP12.79□□□□□ -0.36
TMEM116-215ENST00000552374 ZHX1Q9UKY1 873 aaPredicted RBP12.79□□□□□ -0.36
TMEM116-215ENST00000552374 ZMYND8Q9ULU4 1186 aaPredicted RBP12.79□□□□□ -0.36
TMEM116-215ENST00000552374 KBTBD13C9JR72 458 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 PGK1P00558 417 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 SNHG28P0DPA3 235 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 SYN1P17600 705 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 ACVR2BQ13705 512 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 LRRC41Q15345 812 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 GPATCH4Q5T3I0 446 aaKnown RBP12.79□□□□□ -0.36
TMEM116-215ENST00000552374 IFIT1BQ5T764 474 aaKnown RBP12.79□□□□□ -0.36
TMEM116-215ENST00000552374 MAMDC4Q6UXC1 1216 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 CYB5R4Q7L1T6 521 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.79□□□□□ -0.36
TMEM116-215ENST00000552374 ZNF467Q7Z7K2 595 aaPredicted RBP12.79□□□□□ -0.36
TMEM116-215ENST00000552374 FERMT2Q96AC1 680 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 CCDC136Q96JN2 1154 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 VAT1LQ9HCJ6 419 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 XPNPEP3Q9NQH7 507 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.79□□□□□ -0.36
TMEM116-215ENST00000552374 FAM184BQ9ULE4 1060 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 TNKSO95271 1327 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 SYNGAP1Q96PV0 1343 aa12.79□□□□□ -0.36
TMEM116-215ENST00000552374 A0A0G2JMZ2 1700 aa12.78□□□□□ -0.36
TMEM116-215ENST00000552374 SOWAHBA6NEL2 793 aa12.78□□□□□ -0.36
TMEM116-215ENST00000552374 DHX16O60231 1041 aaKnown RBP12.78□□□□□ -0.36
TMEM116-215ENST00000552374 AKR1A1P14550 325 aa12.78□□□□□ -0.36
TMEM116-215ENST00000552374 ADCYAP1R1P41586 468 aa12.78□□□□□ -0.36
TMEM116-215ENST00000552374 ARMCX2Q7L311 632 aa12.78□□□□□ -0.36
TMEM116-215ENST00000552374 CHST3Q7LGC8 479 aa12.78□□□□□ -0.36
TMEM116-215ENST00000552374 CCDC144CPQ8IYA2 1237 aa12.78□□□□□ -0.36
TMEM116-215ENST00000552374 FAM133AQ8N9E0 248 aa12.78□□□□□ -0.36
TMEM116-215ENST00000552374 MAP4K1Q92918 833 aa12.78□□□□□ -0.36
TMEM116-215ENST00000552374 LENG1Q96BZ8 264 aaPredicted RBP12.78□□□□□ -0.36
TMEM116-215ENST00000552374 FGD4Q96M96 766 aa12.78□□□□□ -0.36
TMEM116-215ENST00000552374 PURBQ96QR8 312 aaKnown RBP12.78□□□□□ -0.36
TMEM116-215ENST00000552374 RBM8AQ9Y5S9 174 aaKnown RBP12.78□□□□□ -0.36
TMEM116-215ENST00000552374 MYH4Q9Y623 1939 aa12.77□□□□□ -0.37
TMEM116-215ENST00000552374 PTPDC1A2A3K4 754 aa12.77□□□□□ -0.37
TMEM116-215ENST00000552374 E7EWF7 191 aa12.77□□□□□ -0.37
TMEM116-215ENST00000552374 IFIT3O14879 490 aaKnown RBP12.77□□□□□ -0.37
TMEM116-215ENST00000552374 PARP1P09874 1014 aaKnown RBP12.77□□□□□ -0.37
TMEM116-215ENST00000552374 BAATQ14032 418 aaPredicted RBP12.77□□□□□ -0.37
TMEM116-215ENST00000552374 CCDC144BQ3MJ40 725 aa12.77□□□□□ -0.37
TMEM116-215ENST00000552374 RALYLQ86SE5 291 aaKnown RBP12.77□□□□□ -0.37
TMEM116-215ENST00000552374 RNF180Q86T96 592 aa12.77□□□□□ -0.37
TMEM116-215ENST00000552374 ADGRF4Q8IZF3 695 aa12.77□□□□□ -0.37
TMEM116-215ENST00000552374 NCOA7Q8NI08 942 aa12.77□□□□□ -0.37
TMEM116-215ENST00000552374 ABHD16BQ9H3Z7 469 aa12.77□□□□□ -0.37
TMEM116-215ENST00000552374 CYP39A1Q9NYL5 469 aa12.77□□□□□ -0.37
TMEM116-215ENST00000552374 RBM27Q9P2N5 1060 aaKnown RBP12.77□□□□□ -0.37
TMEM116-215ENST00000552374 TAF6LQ9Y6J9 622 aa12.77□□□□□ -0.37
TMEM116-215ENST00000552374 DDX49Q9Y6V7 483 aaKnown RBP12.77□□□□□ -0.37
TMEM116-215ENST00000552374 RANBP2P49792 3224 aaKnown RBP12.76□□□□□ -0.37
TMEM116-215ENST00000552374 ERICH2A1L162 156 aa12.76□□□□□ -0.37
TMEM116-215ENST00000552374 ASB14A6NK59 587 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms