RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 SLC12A7Q9Y666 1083 aa26.27■■□□□ 1.8
BRF1-216ENST00000550208 PLXNB2O15031 1838 aa26.26■■□□□ 1.79
BRF1-216ENST00000550208 RXRAP19793 462 aa26.26■■□□□ 1.79
BRF1-216ENST00000550208 COPB2P35606 906 aa26.26■■□□□ 1.79
BRF1-216ENST00000550208 FGD1P98174 961 aa26.26■■□□□ 1.79
BRF1-216ENST00000550208 GRB14Q14449 540 aa26.26■■□□□ 1.79
BRF1-216ENST00000550208 SLC35G1Q2M3R5 365 aa26.26■■□□□ 1.79
BRF1-216ENST00000550208 RUFY3Q7L099 469 aa26.26■■□□□ 1.79
BRF1-216ENST00000550208 MAP3K14Q99558 947 aa26.26■■□□□ 1.79
BRF1-216ENST00000550208 JMJD4Q9H9V9 463 aa26.26■■□□□ 1.79
BRF1-216ENST00000550208 ADCY3O60266 1144 aa26.25■■□□□ 1.79
BRF1-216ENST00000550208 TAL1P17542 331 aaPredicted RBP26.25■■□□□ 1.79
BRF1-216ENST00000550208 MAP2K5Q13163 448 aa26.25■■□□□ 1.79
BRF1-216ENST00000550208 NBPF11Q86T75 865 aa26.25■■□□□ 1.79
BRF1-216ENST00000550208 SOCS4Q8WXH5 440 aa26.25■■□□□ 1.79
BRF1-216ENST00000550208 CYP46A1Q9Y6A2 500 aa26.25■■□□□ 1.79
BRF1-216ENST00000550208 DHX16O60231 1041 aaKnown RBP26.24■■□□□ 1.79
BRF1-216ENST00000550208 ICAM1P05362 532 aa26.24■■□□□ 1.79
BRF1-216ENST00000550208 FCER1AP12319 257 aa26.24■■□□□ 1.79
BRF1-216ENST00000550208 ALAS1P13196 640 aa26.24■■□□□ 1.79
BRF1-216ENST00000550208 RGS2P41220 211 aa26.24■■□□□ 1.79
BRF1-216ENST00000550208 ANAPC15P60006 121 aa26.24■■□□□ 1.79
BRF1-216ENST00000550208 SYNE3Q6ZMZ3 975 aa26.24■■□□□ 1.79
BRF1-216ENST00000550208 CCDC144CPQ8IYA2 1237 aa26.24■■□□□ 1.79
BRF1-216ENST00000550208 CTCFLQ8NI51 663 aaPredicted RBP26.24■■□□□ 1.79
BRF1-216ENST00000550208 SH3TC2Q8TF17 1288 aa26.24■■□□□ 1.79
BRF1-216ENST00000550208 MMP19Q99542 508 aa26.24■■□□□ 1.79
BRF1-216ENST00000550208 UPF3BQ9BZI7 483 aaKnown RBP26.24■■□□□ 1.79
BRF1-216ENST00000550208 HOMER2Q9NSB8 354 aa26.24■■□□□ 1.79
BRF1-216ENST00000550208 CCPG1Q9ULG6 757 aa26.24■■□□□ 1.79
BRF1-216ENST00000550208 COBLO75128 1261 aa26.23■■□□□ 1.79
BRF1-216ENST00000550208 CALM1P0DP23 149 aa26.23■■□□□ 1.79
BRF1-216ENST00000550208 CALM2P0DP24 149 aa26.23■■□□□ 1.79
BRF1-216ENST00000550208 CALM3P0DP25 149 aa26.23■■□□□ 1.79
BRF1-216ENST00000550208 ELNP15502 786 aa26.23■■□□□ 1.79
BRF1-216ENST00000550208 ADORA2AP29274 412 aa26.23■■□□□ 1.79
BRF1-216ENST00000550208 GRK4P32298 578 aa26.23■■□□□ 1.79
BRF1-216ENST00000550208 APOBRQ0VD83 1088 aa26.23■■□□□ 1.79
BRF1-216ENST00000550208 CDC37Q16543 378 aaPredicted RBP26.23■■□□□ 1.79
BRF1-216ENST00000550208 APOA5Q6Q788 366 aa26.23■■□□□ 1.79
BRF1-216ENST00000550208 FANCBQ8NB91 859 aa26.23■■□□□ 1.79
BRF1-216ENST00000550208 CHST13Q8NET6 341 aa26.23■■□□□ 1.79
BRF1-216ENST00000550208 BRF1Q92994 677 aa26.23■■□□□ 1.79
BRF1-216ENST00000550208 TRERF1Q96PN7 1200 aa26.23■■□□□ 1.79
BRF1-216ENST00000550208 SMCHD1A6NHR9 2005 aa26.22■■□□□ 1.79
BRF1-216ENST00000550208 KLF18A0A0U1RQI7 1052 aa26.22■■□□□ 1.79
BRF1-216ENST00000550208 KIF5BP33176 963 aa26.22■■□□□ 1.79
BRF1-216ENST00000550208 TKFCQ3LXA3 575 aa26.22■■□□□ 1.79
BRF1-216ENST00000550208 SLC9C1Q4G0N8 1177 aa26.22■■□□□ 1.79
BRF1-216ENST00000550208 DPP9Q86TI2 863 aa26.22■■□□□ 1.79
BRF1-216ENST00000550208 ABRAQ8N0Z2 381 aa26.22■■□□□ 1.79
BRF1-216ENST00000550208 FBXL16Q8N461 479 aa26.22■■□□□ 1.79
BRF1-216ENST00000550208 NPLOC4Q8TAT6 608 aa26.22■■□□□ 1.79
BRF1-216ENST00000550208 PXYLP1Q8TE99 480 aa26.22■■□□□ 1.79
BRF1-216ENST00000550208 RIOX1Q9H6W3 641 aa26.22■■□□□ 1.79
BRF1-216ENST00000550208 RNF146Q9NTX7 359 aa26.22■■□□□ 1.79
BRF1-216ENST00000550208 CYTH3O43739 400 aa26.21■■□□□ 1.79
BRF1-216ENST00000550208 XRCC5P13010 732 aaKnown RBP26.21■■□□□ 1.79
BRF1-216ENST00000550208 KCTD2Q14681 263 aa26.21■■□□□ 1.79
BRF1-216ENST00000550208 CCL14Q16627 93 aa26.21■■□□□ 1.79
BRF1-216ENST00000550208 MUM1L1Q5H9M0 696 aa26.21■■□□□ 1.79
BRF1-216ENST00000550208 MICU3Q86XE3 530 aa26.21■■□□□ 1.79
BRF1-216ENST00000550208 SLAIN1Q8ND83 568 aa26.21■■□□□ 1.79
BRF1-216ENST00000550208 MTMR8Q96EF0 704 aa26.21■■□□□ 1.79
BRF1-216ENST00000550208 AGXT2Q9BYV1 514 aa26.21■■□□□ 1.79
BRF1-216ENST00000550208 ZNFX1Q9P2E3 1918 aaKnown RBP26.21■■□□□ 1.79
BRF1-216ENST00000550208 ZBTB43O43298 467 aa26.2■■□□□ 1.78
BRF1-216ENST00000550208 QRICH1Q2TAL8 776 aa26.2■■□□□ 1.78
BRF1-216ENST00000550208 ARMC5Q96C12 935 aa26.2■■□□□ 1.78
BRF1-216ENST00000550208 IL17RAQ96F46 866 aa26.2■■□□□ 1.78
BRF1-216ENST00000550208 PDRG1Q9NUG6 133 aa26.2■■□□□ 1.78
BRF1-216ENST00000550208 BIN2Q9UBW5 565 aaPredicted RBP26.2■■□□□ 1.78
BRF1-216ENST00000550208 FBXO40Q9UH90 709 aa26.2■■□□□ 1.78
BRF1-216ENST00000550208 NAP1L2Q9ULW6 460 aaPredicted RBP26.2■■□□□ 1.78
BRF1-216ENST00000550208 PLEKHA8P1O95397 391 aa26.19■■□□□ 1.78
BRF1-216ENST00000550208 PGK2P07205 417 aa26.19■■□□□ 1.78
BRF1-216ENST00000550208 HOXC6P09630 235 aa26.19■■□□□ 1.78
BRF1-216ENST00000550208 GNAQP50148 359 aa26.19■■□□□ 1.78
BRF1-216ENST00000550208 TOB2Q14106 344 aaPredicted RBP26.19■■□□□ 1.78
BRF1-216ENST00000550208 CMTR1Q8N1G2 835 aaKnown RBP26.19■■□□□ 1.78
BRF1-216ENST00000550208 SRBD1Q8N5C6 995 aaKnown RBP26.19■■□□□ 1.78
BRF1-216ENST00000550208 PIGSQ96S52 555 aa26.19■■□□□ 1.78
BRF1-216ENST00000550208 APBA2Q99767 749 aa26.19■■□□□ 1.78
BRF1-216ENST00000550208 ACAD9Q9H845 621 aa26.19■■□□□ 1.78
BRF1-216ENST00000550208 BAZ2BQ9UIF8 2168 aaKnown RBP26.19■■□□□ 1.78
BRF1-216ENST00000550208 USH1GQ495M9 461 aa26.18■■□□□ 1.78
BRF1-216ENST00000550208 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.18■■□□□ 1.78
BRF1-216ENST00000550208 ANKRD35Q8N283 1001 aa26.18■■□□□ 1.78
BRF1-216ENST00000550208 TRIB2Q92519 343 aa26.18■■□□□ 1.78
BRF1-216ENST00000550208 DDX11Q96FC9 970 aa26.18■■□□□ 1.78
BRF1-216ENST00000550208 LZTS2Q9BRK4 669 aa26.18■■□□□ 1.78
BRF1-216ENST00000550208 LARP6Q9BRS8 491 aaKnown RBP26.18■■□□□ 1.78
BRF1-216ENST00000550208 FLRT1Q9NZU1 646 aa26.18■■□□□ 1.78
BRF1-216ENST00000550208 PNMA2Q9UL42 364 aa26.18■■□□□ 1.78
BRF1-216ENST00000550208 MYCP01106 439 aaPredicted RBP26.17■■□□□ 1.78
BRF1-216ENST00000550208 SMARCA1P28370 1054 aa26.17■■□□□ 1.78
BRF1-216ENST00000550208 TRIM32Q13049 653 aa26.17■■□□□ 1.78
BRF1-216ENST00000550208 FBXO11Q86XK2 927 aa26.17■■□□□ 1.78
BRF1-216ENST00000550208 HOMER1Q86YM7 354 aa26.17■■□□□ 1.78
BRF1-216ENST00000550208 PIBF1Q8WXW3 757 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms