RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 LSG1Q9H089 658 aaKnown RBP11.51□□□□□ -0.57
HDAC7-229ENST00000549883 RBM8AQ9Y5S9 174 aaKnown RBP11.51□□□□□ -0.57
HDAC7-229ENST00000549883 SNHG28P0DPA3 235 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 ALAS1P13196 640 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 CNTN2Q02246 1040 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 SEC23AQ15436 765 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 BMP2KLQ5H9B9 411 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 PPP4R3BQ5MIZ7 849 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 SYDE2Q5VT97 1194 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 BTNL9Q6UXG8 535 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 DGKHQ86XP1 1220 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 ANKS1AQ92625 1134 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 LENG1Q96BZ8 264 aaPredicted RBP11.5□□□□□ -0.57
HDAC7-229ENST00000549883 KRT23Q9C075 422 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 UBA5Q9GZZ9 404 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 GPHNQ9NQX3 736 aaPredicted RBP11.5□□□□□ -0.57
HDAC7-229ENST00000549883 RNF146Q9NTX7 359 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 CTDP1Q9Y5B0 961 aaPredicted RBP11.5□□□□□ -0.57
HDAC7-229ENST00000549883 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
HDAC7-229ENST00000549883 TNKSO95271 1327 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 CEP290O15078 2479 aa11.5□□□□□ -0.57
HDAC7-229ENST00000549883 E7EWF7 191 aa11.49□□□□□ -0.57
HDAC7-229ENST00000549883 H0YGN5 161 aa11.49□□□□□ -0.57
HDAC7-229ENST00000549883 SNAI1O95863 264 aaPredicted RBP11.49□□□□□ -0.57
HDAC7-229ENST00000549883 OAZ1P54368 228 aa11.49□□□□□ -0.57
HDAC7-229ENST00000549883 ANTXR2P58335 489 aa11.49□□□□□ -0.57
HDAC7-229ENST00000549883 PRPF38BQ5VTL8 546 aaKnown RBP11.49□□□□□ -0.57
HDAC7-229ENST00000549883 IQCA1Q86XH1 822 aa11.49□□□□□ -0.57
HDAC7-229ENST00000549883 PNMA1Q8ND90 353 aa11.49□□□□□ -0.57
HDAC7-229ENST00000549883 DDX11Q96FC9 970 aa11.49□□□□□ -0.57
HDAC7-229ENST00000549883 TRERF1Q96PN7 1200 aa11.49□□□□□ -0.57
HDAC7-229ENST00000549883 TINF2Q9BSI4 451 aa11.49□□□□□ -0.57
HDAC7-229ENST00000549883 RANBP17Q9H2T7 1088 aaKnown RBP11.49□□□□□ -0.57
HDAC7-229ENST00000549883 A1CFQ9NQ94 594 aaKnown RBP11.49□□□□□ -0.57
HDAC7-229ENST00000549883 DDX20Q9UHI6 824 aaKnown RBP11.49□□□□□ -0.57
HDAC7-229ENST00000549883 ASTN1O14525 1302 aa11.49□□□□□ -0.57
HDAC7-229ENST00000549883 PFASO15067 1338 aa11.49□□□□□ -0.57
HDAC7-229ENST00000549883 SOWAHBA6NEL2 793 aa11.48□□□□□ -0.57
HDAC7-229ENST00000549883 ZNF865P0CJ78 1059 aaPredicted RBP11.48□□□□□ -0.57
HDAC7-229ENST00000549883 COPB2P35606 906 aa11.48□□□□□ -0.57
HDAC7-229ENST00000549883 SLC35G1Q2M3R5 365 aa11.48□□□□□ -0.57
HDAC7-229ENST00000549883 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.48□□□□□ -0.57
HDAC7-229ENST00000549883 ANKRD35Q8N283 1001 aa11.48□□□□□ -0.57
HDAC7-229ENST00000549883 STAG2Q8N3U4 1231 aa11.48□□□□□ -0.57
HDAC7-229ENST00000549883 CHST13Q8NET6 341 aa11.48□□□□□ -0.57
HDAC7-229ENST00000549883 DPF3Q92784 378 aa11.48□□□□□ -0.57
HDAC7-229ENST00000549883 KAT14Q9H8E8 782 aa11.48□□□□□ -0.57
HDAC7-229ENST00000549883 CNNM2Q9H8M5 875 aa11.48□□□□□ -0.57
HDAC7-229ENST00000549883 CCPG1Q9ULG6 757 aa11.48□□□□□ -0.57
HDAC7-229ENST00000549883 LRRC37A2A6NM11 1700 aa11.48□□□□□ -0.57
HDAC7-229ENST00000549883 NFIBO00712 420 aa11.47□□□□□ -0.57
HDAC7-229ENST00000549883 SLC27A2O14975 620 aa11.47□□□□□ -0.57
HDAC7-229ENST00000549883 ADCY6O43306 1168 aa11.47□□□□□ -0.57
HDAC7-229ENST00000549883 ICAM1P05362 532 aa11.47□□□□□ -0.57
HDAC7-229ENST00000549883 COL6A1P12109 1028 aa11.47□□□□□ -0.57
HDAC7-229ENST00000549883 PTGS1P23219 599 aa11.47□□□□□ -0.57
HDAC7-229ENST00000549883 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-229ENST00000549883 GJC2Q5T442 439 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-229ENST00000549883 NECAB2Q7Z6G3 386 aa11.47□□□□□ -0.57
HDAC7-229ENST00000549883 MB21D2Q8IYB1 491 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-229ENST00000549883 FAM133AQ8N9E0 248 aa11.47□□□□□ -0.57
HDAC7-229ENST00000549883 ANKLE1Q8NAG6 615 aa11.47□□□□□ -0.57
HDAC7-229ENST00000549883 CLEC4DQ8WXI8 215 aa11.47□□□□□ -0.57
HDAC7-229ENST00000549883 UBAC1Q9BSL1 405 aa11.47□□□□□ -0.57
HDAC7-229ENST00000549883 ACAD9Q9H845 621 aa11.47□□□□□ -0.57
HDAC7-229ENST00000549883 SLC5A4Q9NY91 659 aa11.47□□□□□ -0.57
HDAC7-229ENST00000549883 DIS3Q9Y2L1 958 aaKnown RBP11.47□□□□□ -0.57
HDAC7-229ENST00000549883 IFIT3O14879 490 aaKnown RBP11.46□□□□□ -0.57
HDAC7-229ENST00000549883 SEPT4O43236 478 aa11.46□□□□□ -0.57
HDAC7-229ENST00000549883 MYCNP04198 464 aaPredicted RBP11.46□□□□□ -0.57
HDAC7-229ENST00000549883 FDX1P10109 184 aa11.46□□□□□ -0.57
HDAC7-229ENST00000549883 NECTIN1Q15223 517 aa11.46□□□□□ -0.57
HDAC7-229ENST00000549883 IFIT1BQ5T764 474 aaKnown RBP11.46□□□□□ -0.57
HDAC7-229ENST00000549883 CREB3L3Q68CJ9 461 aa11.46□□□□□ -0.57
HDAC7-229ENST00000549883 MAMDC4Q6UXC1 1216 aa11.46□□□□□ -0.57
HDAC7-229ENST00000549883 NSMFQ6X4W1 530 aa11.46□□□□□ -0.57
HDAC7-229ENST00000549883 C11orf49Q9H6J7 331 aa11.46□□□□□ -0.57
HDAC7-229ENST00000549883 VAT1LQ9HCJ6 419 aa11.46□□□□□ -0.57
HDAC7-229ENST00000549883 ANO2Q9NQ90 1003 aa11.46□□□□□ -0.57
HDAC7-229ENST00000549883 CYP39A1Q9NYL5 469 aa11.46□□□□□ -0.57
HDAC7-229ENST00000549883 FBXO40Q9UH90 709 aa11.46□□□□□ -0.57
HDAC7-229ENST00000549883 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 PGK1P00558 417 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 TRDNQ13061 729 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 BAATQ14032 418 aaPredicted RBP11.45□□□□□ -0.58
HDAC7-229ENST00000549883 LRRC26Q2I0M4 334 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 TKFCQ3LXA3 575 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 USH1GQ495M9 461 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 CCDC178Q5BJE1 867 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 TMEM63BQ5T3F8 832 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 SLC30A10Q6XR72 485 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 KIAA1211Q6ZU35 1233 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 ARMCX2Q7L311 632 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 CCDC144CPQ8IYA2 1237 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 ADGRF4Q8IZF3 695 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 NCOA7Q8NI08 942 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 IGDCC4Q8TDY8 1250 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 TBC1D5Q92609 795 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 HTATIP2Q9BUP3 242 aa11.45□□□□□ -0.58
HDAC7-229ENST00000549883 KATNBL1Q9H079 304 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms