RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 PRAMEF19Q5SWL8 479 aa27.41■■□□□ 1.98
SMARCC2-204ENST00000547356 DIS3LQ8TF46 1054 aaKnown RBP27.41■■□□□ 1.98
SMARCC2-204ENST00000547356 ANO2Q9NQ90 1003 aa27.41■■□□□ 1.98
SMARCC2-204ENST00000547356 SLC5A4Q9NY91 659 aa27.41■■□□□ 1.98
SMARCC2-204ENST00000547356 ALAS1P13196 640 aa27.4■■□□□ 1.98
SMARCC2-204ENST00000547356 CYBAP13498 195 aa27.4■■□□□ 1.98
SMARCC2-204ENST00000547356 TRDNQ13061 729 aa27.4■■□□□ 1.98
SMARCC2-204ENST00000547356 SEC23AQ15436 765 aa27.4■■□□□ 1.98
SMARCC2-204ENST00000547356 CHST3Q7LGC8 479 aa27.4■■□□□ 1.98
SMARCC2-204ENST00000547356 RANBP17Q9H2T7 1088 aaKnown RBP27.4■■□□□ 1.98
SMARCC2-204ENST00000547356 RNF146Q9NTX7 359 aa27.4■■□□□ 1.98
SMARCC2-204ENST00000547356 PDE4DIPQ5VU43 2346 aa27.4■■□□□ 1.98
SMARCC2-204ENST00000547356 CNGA1P29973 690 aa27.39■■□□□ 1.98
SMARCC2-204ENST00000547356 COL9A3Q14050 684 aaPredicted RBP27.39■■□□□ 1.98
SMARCC2-204ENST00000547356 LHX8Q68G74 356 aa27.39■■□□□ 1.98
SMARCC2-204ENST00000547356 CHST13Q8NET6 341 aa27.39■■□□□ 1.98
SMARCC2-204ENST00000547356 DDX11Q96FC9 970 aa27.39■■□□□ 1.98
SMARCC2-204ENST00000547356 SENP2Q9HC62 589 aa27.39■■□□□ 1.98
SMARCC2-204ENST00000547356 DNAJC25-GNG10A0A024R161 153 aa27.38■■□□□ 1.97
SMARCC2-204ENST00000547356 CDC45O75419 566 aa27.38■■□□□ 1.97
SMARCC2-204ENST00000547356 MUM1L1Q5H9M0 696 aa27.38■■□□□ 1.97
SMARCC2-204ENST00000547356 IFIT1BQ5T764 474 aaKnown RBP27.38■■□□□ 1.97
SMARCC2-204ENST00000547356 RALYLQ86SE5 291 aaKnown RBP27.38■■□□□ 1.97
SMARCC2-204ENST00000547356 UBA5Q9GZZ9 404 aa27.38■■□□□ 1.97
SMARCC2-204ENST00000547356 OGDHLQ9ULD0 1010 aa27.38■■□□□ 1.97
SMARCC2-204ENST00000547356 CCPG1Q9ULG6 757 aa27.38■■□□□ 1.97
SMARCC2-204ENST00000547356 SLC27A2O14975 620 aa27.37■■□□□ 1.97
SMARCC2-204ENST00000547356 MNX1P50219 401 aaPredicted RBP27.37■■□□□ 1.97
SMARCC2-204ENST00000547356 ANTXR2P58335 489 aa27.37■■□□□ 1.97
SMARCC2-204ENST00000547356 ANKRD35Q8N283 1001 aa27.37■■□□□ 1.97
SMARCC2-204ENST00000547356 NCOA7Q8NI08 942 aa27.37■■□□□ 1.97
SMARCC2-204ENST00000547356 PAWRQ96IZ0 340 aaKnown RBP27.37■■□□□ 1.97
SMARCC2-204ENST00000547356 TRERF1Q96PN7 1200 aa27.37■■□□□ 1.97
SMARCC2-204ENST00000547356 ACAD9Q9H845 621 aa27.37■■□□□ 1.97
SMARCC2-204ENST00000547356 PLXNA1Q9UIW2 1896 aa27.37■■□□□ 1.97
SMARCC2-204ENST00000547356 ANO1Q5XXA6 986 aa27.36■■□□□ 1.97
SMARCC2-204ENST00000547356 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.36■■□□□ 1.97
SMARCC2-204ENST00000547356 FGD4Q96M96 766 aa27.36■■□□□ 1.97
SMARCC2-204ENST00000547356 FBXO40Q9UH90 709 aa27.36■■□□□ 1.97
SMARCC2-204ENST00000547356 DDX20Q9UHI6 824 aaKnown RBP27.36■■□□□ 1.97
SMARCC2-204ENST00000547356 ICAM1P05362 532 aa27.35■■□□□ 1.97
SMARCC2-204ENST00000547356 CREB3L3Q68CJ9 461 aa27.35■■□□□ 1.97
SMARCC2-204ENST00000547356 MB21D2Q8IYB1 491 aaPredicted RBP27.35■■□□□ 1.97
SMARCC2-204ENST00000547356 TINF2Q9BSI4 451 aa27.35■■□□□ 1.97
SMARCC2-204ENST00000547356 A1CFQ9NQ94 594 aaKnown RBP27.35■■□□□ 1.97
SMARCC2-204ENST00000547356 PPP4R2Q9NY27 417 aa27.35■■□□□ 1.97
SMARCC2-204ENST00000547356 DIS3Q9Y2L1 958 aaKnown RBP27.35■■□□□ 1.97
SMARCC2-204ENST00000547356 IFIT3O14879 490 aaKnown RBP27.34■■□□□ 1.97
SMARCC2-204ENST00000547356 CNTN2Q02246 1040 aa27.34■■□□□ 1.97
SMARCC2-204ENST00000547356 GPATCH4Q5T3I0 446 aaKnown RBP27.34■■□□□ 1.97
SMARCC2-204ENST00000547356 SMCHD1A6NHR9 2005 aa27.34■■□□□ 1.97
SMARCC2-204ENST00000547356 NECTIN1Q15223 517 aa27.33■■□□□ 1.97
SMARCC2-204ENST00000547356 TKFCQ3LXA3 575 aa27.33■■□□□ 1.97
SMARCC2-204ENST00000547356 GPHNQ9NQX3 736 aaPredicted RBP27.33■■□□□ 1.97
SMARCC2-204ENST00000547356 FRMPD3Q5JV73 1810 aa27.32■■□□□ 1.96
SMARCC2-204ENST00000547356 STAG2Q8N3U4 1231 aa27.32■■□□□ 1.96
SMARCC2-204ENST00000547356 PARP1P09874 1014 aaKnown RBP27.31■■□□□ 1.96
SMARCC2-204ENST00000547356 ASPRV1Q53RT3 343 aa27.31■■□□□ 1.96
SMARCC2-204ENST00000547356 CASC1Q6TDU7 716 aa27.31■■□□□ 1.96
SMARCC2-204ENST00000547356 NSMFQ6X4W1 530 aa27.31■■□□□ 1.96
SMARCC2-204ENST00000547356 ANKLE1Q8NAG6 615 aa27.31■■□□□ 1.96
SMARCC2-204ENST00000547356 PURBQ96QR8 312 aaKnown RBP27.31■■□□□ 1.96
SMARCC2-204ENST00000547356 DDX49Q9Y6V7 483 aaKnown RBP27.31■■□□□ 1.96
SMARCC2-204ENST00000547356 POTEB2H3BUK9 544 aa27.3■■□□□ 1.96
SMARCC2-204ENST00000547356 NFIBO00712 420 aa27.3■■□□□ 1.96
SMARCC2-204ENST00000547356 SNAI1O95863 264 aaPredicted RBP27.3■■□□□ 1.96
SMARCC2-204ENST00000547356 WTAPQ15007 396 aa27.3■■□□□ 1.96
SMARCC2-204ENST00000547356 TMEM67Q5HYA8 995 aa27.3■■□□□ 1.96
SMARCC2-204ENST00000547356 ADGRF4Q8IZF3 695 aa27.3■■□□□ 1.96
SMARCC2-204ENST00000547356 FAM133AQ8N9E0 248 aa27.3■■□□□ 1.96
SMARCC2-204ENST00000547356 SOWAHBA6NEL2 793 aa27.29■■□□□ 1.96
SMARCC2-204ENST00000547356 SEPT4O43236 478 aa27.29■■□□□ 1.96
SMARCC2-204ENST00000547356 CDC37Q16543 378 aaPredicted RBP27.29■■□□□ 1.96
SMARCC2-204ENST00000547356 PRPF38BQ5VTL8 546 aaKnown RBP27.29■■□□□ 1.96
SMARCC2-204ENST00000547356 NECAB2Q7Z6G3 386 aa27.29■■□□□ 1.96
SMARCC2-204ENST00000547356 IGDCC4Q8TDY8 1250 aa27.29■■□□□ 1.96
SMARCC2-204ENST00000547356 DPF3Q92784 378 aa27.29■■□□□ 1.96
SMARCC2-204ENST00000547356 LENG1Q96BZ8 264 aaPredicted RBP27.29■■□□□ 1.96
SMARCC2-204ENST00000547356 VAT1LQ9HCJ6 419 aa27.29■■□□□ 1.96
SMARCC2-204ENST00000547356 CYP39A1Q9NYL5 469 aa27.29■■□□□ 1.96
SMARCC2-204ENST00000547356 ASTN1O14525 1302 aa27.29■■□□□ 1.96
SMARCC2-204ENST00000547356 ERICH2A1L162 156 aa27.28■■□□□ 1.96
SMARCC2-204ENST00000547356 PRC1O43663 620 aa27.28■■□□□ 1.96
SMARCC2-204ENST00000547356 ZNF865P0CJ78 1059 aaPredicted RBP27.28■■□□□ 1.96
SMARCC2-204ENST00000547356 CAPN2P17655 700 aa27.28■■□□□ 1.96
SMARCC2-204ENST00000547356 USH1GQ495M9 461 aa27.28■■□□□ 1.96
SMARCC2-204ENST00000547356 MAMDC4Q6UXC1 1216 aa27.28■■□□□ 1.96
SMARCC2-204ENST00000547356 CLEC4DQ8WXI8 215 aa27.28■■□□□ 1.96
SMARCC2-204ENST00000547356 C11orf49Q9H6J7 331 aa27.28■■□□□ 1.96
SMARCC2-204ENST00000547356 MAD2L2Q9UI95 211 aa27.28■■□□□ 1.96
SMARCC2-204ENST00000547356 PFASO15067 1338 aa27.27■■□□□ 1.96
SMARCC2-204ENST00000547356 SYNGAP1Q96PV0 1343 aa27.27■■□□□ 1.96
SMARCC2-204ENST00000547356 DHX16O60231 1041 aaKnown RBP27.27■■□□□ 1.96
SMARCC2-204ENST00000547356 MSCO60682 206 aa27.27■■□□□ 1.96
SMARCC2-204ENST00000547356 ZNF467Q7Z7K2 595 aaPredicted RBP27.27■■□□□ 1.96
SMARCC2-204ENST00000547356 HTATIP2Q9BUP3 242 aa27.27■■□□□ 1.96
SMARCC2-204ENST00000547356 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.27■■□□□ 1.96
SMARCC2-204ENST00000547356 ZHX1Q9UKY1 873 aaPredicted RBP27.27■■□□□ 1.96
SMARCC2-204ENST00000547356 WDR19Q8NEZ3 1342 aa27.26■■□□□ 1.95
SMARCC2-204ENST00000547356 BAATQ14032 418 aaPredicted RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms