RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 IFT88Q13099 833 aa11.94□□□□□ -0.5
NPAS3-205ENST00000547068 NR5A1Q13285 461 aa11.94□□□□□ -0.5
NPAS3-205ENST00000547068 ITPK1Q13572 414 aa11.94□□□□□ -0.5
NPAS3-205ENST00000547068 LRRC24Q50LG9 513 aa11.94□□□□□ -0.5
NPAS3-205ENST00000547068 KDM7AQ6ZMT4 941 aa11.94□□□□□ -0.5
NPAS3-205ENST00000547068 TBC1D10CQ8IV04 446 aa11.94□□□□□ -0.5
NPAS3-205ENST00000547068 TEX11Q8IYF3 940 aa11.94□□□□□ -0.5
NPAS3-205ENST00000547068 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.94□□□□□ -0.5
NPAS3-205ENST00000547068 TMEM87BQ96K49 555 aa11.94□□□□□ -0.5
NPAS3-205ENST00000547068 ZIM3Q96PE6 472 aa11.94□□□□□ -0.5
NPAS3-205ENST00000547068 DNAJC7Q99615 494 aa11.94□□□□□ -0.5
NPAS3-205ENST00000547068 LACRTQ9GZZ8 138 aa11.94□□□□□ -0.5
NPAS3-205ENST00000547068 POLD4Q9HCU8 107 aa11.94□□□□□ -0.5
NPAS3-205ENST00000547068 AATFQ9NY61 560 aaKnown RBP eCLIP11.94□□□□□ -0.5
NPAS3-205ENST00000547068 AFDNP55196 1824 aaKnown RBP11.93□□□□□ -0.5
NPAS3-205ENST00000547068 NEBLO76041 1014 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 CYLC1P35663 651 aaPredicted RBP11.93□□□□□ -0.5
NPAS3-205ENST00000547068 MRPL12P52815 198 aaKnown RBP11.93□□□□□ -0.5
NPAS3-205ENST00000547068 SNCBQ16143 134 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 WDR59Q6PJI9 974 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 CREG2Q8IUH2 290 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 FAXDC2Q96IV6 333 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 CCDC87Q9NVE4 849 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 RWDD2AQ9UIY3 292 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 ZNF330Q9Y3S2 320 aaPredicted RBP11.93□□□□□ -0.5
NPAS3-205ENST00000547068 RCCD1A6NED2 376 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 PES1O00541 588 aaKnown RBP11.93□□□□□ -0.5
NPAS3-205ENST00000547068 PPP1R37O75864 691 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 PAX7P23759 505 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 CRKLP46109 303 aaKnown RBP11.93□□□□□ -0.5
NPAS3-205ENST00000547068 KCNQ4P56696 695 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 PPARAQ07869 468 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 PAK1Q13153 545 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 PTGISQ16647 500 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 TMEM67Q5HYA8 995 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 IGDCC4Q8TDY8 1250 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 STAMQ92783 540 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 CCT8L2Q96SF2 557 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 CABP5Q9NP86 173 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 SLC12A7Q9Y666 1083 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 DUSP10Q9Y6W6 482 aa11.93□□□□□ -0.5
NPAS3-205ENST00000547068 ZNF831Q5JPB2 1677 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 GOLGA6L7A0A1B0GV03 622 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 SEC24CP53992 1094 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 CASP7P55210 303 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 FOXO4P98177 505 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 HDLBPQ00341 1268 aaKnown RBP11.92□□□□□ -0.5
NPAS3-205ENST00000547068 ITIH3Q06033 890 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 CRYMQ14894 314 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 FKBP15Q5T1M5 1219 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 NLRP14Q86W24 1093 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 TRIM22Q8IYM9 498 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 CEP120Q8N960 986 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 SPATA4Q8NEY3 305 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 MYCBPAPQ8TBZ2 947 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 TBC1D22AQ8WUA7 517 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 SYMPKQ92797 1274 aaKnown RBP11.92□□□□□ -0.5
NPAS3-205ENST00000547068 CAVIN3Q969G5 261 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 CCDC114Q96M63 670 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 LY9Q9HBG7 655 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 STIM2Q9P246 746 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 SNX12Q9UMY4 172 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 TBC1D2BQ9UPU7 963 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 LY75O60449 1722 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 NBPF26B4DH59 902 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 EYA2O00167 538 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 IFNAR1P17181 557 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 ERCC3P19447 782 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 DRP2Q13474 957 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 TXNRD1Q16881 649 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 NBPF10Q6P3W6 841 aaKnown RBP11.92□□□□□ -0.5
NPAS3-205ENST00000547068 CCDC125Q86Z20 511 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 FMNL3Q8IVF7 1028 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 PARP9Q8IXQ6 854 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 NBPF15Q8N660 670 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 MB21D1Q8N884 522 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 NELFBQ8WX92 580 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 ZNF594Q96JF6 807 aaPredicted RBP11.92□□□□□ -0.5
NPAS3-205ENST00000547068 DDX20Q9UHI6 824 aaKnown RBP11.92□□□□□ -0.5
NPAS3-205ENST00000547068 GGA2Q9UJY4 613 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 CAPN11Q9UMQ6 739 aa11.92□□□□□ -0.5
NPAS3-205ENST00000547068 TJP1Q07157 1748 aa11.91□□□□□ -0.5
NPAS3-205ENST00000547068 PDHBP11177 359 aa11.91□□□□□ -0.5
NPAS3-205ENST00000547068 EZRP15311 586 aaKnown RBP11.91□□□□□ -0.5
NPAS3-205ENST00000547068 NR1D1P20393 614 aa11.91□□□□□ -0.5
NPAS3-205ENST00000547068 CALRP27797 417 aaKnown RBP11.91□□□□□ -0.5
NPAS3-205ENST00000547068 IL6STP40189 918 aaPredicted RBP11.91□□□□□ -0.5
NPAS3-205ENST00000547068 BAG6P46379 1132 aa11.91□□□□□ -0.5
NPAS3-205ENST00000547068 APBA1Q02410 837 aa11.91□□□□□ -0.5
NPAS3-205ENST00000547068 KIF5AQ12840 1032 aa11.91□□□□□ -0.5
NPAS3-205ENST00000547068 CFAP58Q5T655 872 aa11.91□□□□□ -0.5
NPAS3-205ENST00000547068 RC3H1Q5TC82 1133 aaKnown RBP11.91□□□□□ -0.5
NPAS3-205ENST00000547068 CCDC121Q6ZUS5 278 aa11.91□□□□□ -0.5
NPAS3-205ENST00000547068 SGMS1Q86VZ5 419 aa11.91□□□□□ -0.5
NPAS3-205ENST00000547068 CCDC50Q8IVM0 306 aa11.91□□□□□ -0.5
NPAS3-205ENST00000547068 LINC00116Q8NCU8 138 aa11.91□□□□□ -0.5
NPAS3-205ENST00000547068 CCDC43Q96MW1 224 aaKnown RBP11.91□□□□□ -0.5
NPAS3-205ENST00000547068 BLZF1Q9H2G9 400 aa11.91□□□□□ -0.5
NPAS3-205ENST00000547068 ZNHIT6Q9NWK9 470 aaKnown RBP11.91□□□□□ -0.5
NPAS3-205ENST00000547068 VPS54Q9P1Q0 977 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms