RNA–Protein interactions for RNA: ENST00000546480.1

VENTXP3-201, Transcript of VENT homeobox pseudogene 3, humanhuman

BASIC

Gene VENTXP3, Length 773 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VENTXP3-201ENST00000546480 TRERF1Q96PN7 1200 aa16.09■□□□□ 0.17
VENTXP3-201ENST00000546480 LRRC2Q9BYS8 371 aa16.09■□□□□ 0.17
VENTXP3-201ENST00000546480 RANBP17Q9H2T7 1088 aaKnown RBP16.09■□□□□ 0.17
VENTXP3-201ENST00000546480 ACAD9Q9H845 621 aa16.09■□□□□ 0.17
VENTXP3-201ENST00000546480 VAT1LQ9HCJ6 419 aa16.09■□□□□ 0.17
VENTXP3-201ENST00000546480 HMX1Q9NP08 348 aaPredicted RBP16.09■□□□□ 0.17
VENTXP3-201ENST00000546480 RNF146Q9NTX7 359 aa16.09■□□□□ 0.17
VENTXP3-201ENST00000546480 FBXO40Q9UH90 709 aa16.09■□□□□ 0.17
VENTXP3-201ENST00000546480 ATP2A1O14983 1001 aa16.08■□□□□ 0.16
VENTXP3-201ENST00000546480 COBLO75128 1261 aa16.08■□□□□ 0.16
VENTXP3-201ENST00000546480 SNHG28P0DPA3 235 aa16.08■□□□□ 0.16
VENTXP3-201ENST00000546480 TAL1P17542 331 aaPredicted RBP16.08■□□□□ 0.16
VENTXP3-201ENST00000546480 CNGA1P29973 690 aa16.08■□□□□ 0.16
VENTXP3-201ENST00000546480 ANTXR2P58335 489 aa16.08■□□□□ 0.16
VENTXP3-201ENST00000546480 MLLT1Q03111 559 aaPredicted RBP16.08■□□□□ 0.16
VENTXP3-201ENST00000546480 BTNL9Q6UXG8 535 aa16.08■□□□□ 0.16
VENTXP3-201ENST00000546480 CHST13Q8NET6 341 aa16.08■□□□□ 0.16
VENTXP3-201ENST00000546480 DEFB118Q96PH6 123 aa16.08■□□□□ 0.16
VENTXP3-201ENST00000546480 NEK1Q96PY6 1258 aa16.08■□□□□ 0.16
VENTXP3-201ENST00000546480 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.08■□□□□ 0.16
VENTXP3-201ENST00000546480 FLRT1Q9NZU1 646 aa16.08■□□□□ 0.16
VENTXP3-201ENST00000546480 PLXNA1Q9UIW2 1896 aa16.08■□□□□ 0.16
VENTXP3-201ENST00000546480 ICAM1P05362 532 aa16.07■□□□□ 0.16
VENTXP3-201ENST00000546480 CYP2C19P33261 490 aa16.07■□□□□ 0.16
VENTXP3-201ENST00000546480 FGD1P98174 961 aa16.07■□□□□ 0.16
VENTXP3-201ENST00000546480 CACNB2Q08289 660 aaPredicted RBP16.07■□□□□ 0.16
VENTXP3-201ENST00000546480 KRT32Q14532 448 aa16.07■□□□□ 0.16
VENTXP3-201ENST00000546480 USH1GQ495M9 461 aa16.07■□□□□ 0.16
VENTXP3-201ENST00000546480 SENP2Q9HC62 589 aa16.07■□□□□ 0.16
VENTXP3-201ENST00000546480 ZNF536O15090 1300 aa16.07■□□□□ 0.16
VENTXP3-201ENST00000546480 RPTORQ8N122 1335 aa16.07■□□□□ 0.16
VENTXP3-201ENST00000546480 ZNFX1Q9P2E3 1918 aaKnown RBP16.07■□□□□ 0.16
VENTXP3-201ENST00000546480 TFRCP02786 760 aaKnown RBP16.06■□□□□ 0.16
VENTXP3-201ENST00000546480 HOXC6P09630 235 aa16.06■□□□□ 0.16
VENTXP3-201ENST00000546480 CDC37Q16543 378 aaPredicted RBP16.06■□□□□ 0.16
VENTXP3-201ENST00000546480 TKFCQ3LXA3 575 aa16.06■□□□□ 0.16
VENTXP3-201ENST00000546480 NSMFQ6X4W1 530 aa16.06■□□□□ 0.16
VENTXP3-201ENST00000546480 ADGRF4Q8IZF3 695 aa16.06■□□□□ 0.16
VENTXP3-201ENST00000546480 STAG2Q8N3U4 1231 aa16.06■□□□□ 0.16
VENTXP3-201ENST00000546480 U2AF1L4Q8WU68 220 aaKnown RBP16.06■□□□□ 0.16
VENTXP3-201ENST00000546480 MAML3Q96JK9 1138 aa16.06■□□□□ 0.16
VENTXP3-201ENST00000546480 TMEM87BQ96K49 555 aa16.06■□□□□ 0.16
VENTXP3-201ENST00000546480 MYL10Q9BUA6 226 aa16.06■□□□□ 0.16
VENTXP3-201ENST00000546480 GTF3C3Q9Y5Q9 886 aa16.06■□□□□ 0.16
VENTXP3-201ENST00000546480 SH2B2O14492 632 aaPredicted RBP16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 GJB1P08034 283 aa16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 CCND3P30281 292 aaPredicted RBP16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 ADCK5Q3MIX3 580 aa16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 MUM1L1Q5H9M0 696 aa16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 HOMER1Q86YM7 354 aa16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 RASEFQ8IZ41 740 aa16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 ZNF654Q8IZM8 581 aa16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 CTCFLQ8NI51 663 aaPredicted RBP16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 IGDCC4Q8TDY8 1250 aa16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 TCEANC2Q96MN5 208 aa16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 JAKMIP1Q96N16 626 aaKnown RBP16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 LY9Q9HBG7 655 aa16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 GPHNQ9NQX3 736 aaPredicted RBP16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 NAP1L2Q9ULW6 460 aaPredicted RBP16.05■□□□□ 0.16
VENTXP3-201ENST00000546480 BRCA2P51587 3418 aa16.04■□□□□ 0.16
VENTXP3-201ENST00000546480 PTPDC1A2A3K4 754 aa16.04■□□□□ 0.16
VENTXP3-201ENST00000546480 KLRF2D3W0D1 207 aa16.04■□□□□ 0.16
VENTXP3-201ENST00000546480 POTEB2H3BUK9 544 aa16.04■□□□□ 0.16
VENTXP3-201ENST00000546480 SGPL1O95470 568 aa16.04■□□□□ 0.16
VENTXP3-201ENST00000546480 HSPA4P34932 840 aa16.04■□□□□ 0.16
VENTXP3-201ENST00000546480 GJA8P48165 433 aa16.04■□□□□ 0.16
VENTXP3-201ENST00000546480 GRM4Q14833 912 aa16.04■□□□□ 0.16
VENTXP3-201ENST00000546480 OLFML2BQ68BL8 750 aa16.04■□□□□ 0.16
VENTXP3-201ENST00000546480 SYNE3Q6ZMZ3 975 aa16.04■□□□□ 0.16
VENTXP3-201ENST00000546480 RAB11FIP4Q86YS3 637 aa16.04■□□□□ 0.16
VENTXP3-201ENST00000546480 CCDC144CPQ8IYA2 1237 aa16.04■□□□□ 0.16
VENTXP3-201ENST00000546480 MAD2L2Q9UI95 211 aa16.04■□□□□ 0.16
VENTXP3-201ENST00000546480 PFASO15067 1338 aa16.03■□□□□ 0.16
VENTXP3-201ENST00000546480 RXRAP19793 462 aa16.03■□□□□ 0.16
VENTXP3-201ENST00000546480 COL9A3Q14050 684 aaPredicted RBP16.03■□□□□ 0.16
VENTXP3-201ENST00000546480 ZNF792Q3KQV3 632 aa16.03■□□□□ 0.16
VENTXP3-201ENST00000546480 TMTC2Q8N394 836 aa16.03■□□□□ 0.16
VENTXP3-201ENST00000546480 PIBF1Q8WXW3 757 aa16.03■□□□□ 0.16
VENTXP3-201ENST00000546480 MTA3Q9BTC8 594 aa16.03■□□□□ 0.16
VENTXP3-201ENST00000546480 A1CFQ9NQ94 594 aaKnown RBP16.03■□□□□ 0.16
VENTXP3-201ENST00000546480 PAK6Q9NQU5 681 aaPredicted RBP16.03■□□□□ 0.16
VENTXP3-201ENST00000546480 PNMA2Q9UL42 364 aa16.03■□□□□ 0.16
VENTXP3-201ENST00000546480 SNX14Q9Y5W7 946 aa16.03■□□□□ 0.16
VENTXP3-201ENST00000546480 SLC12A7Q9Y666 1083 aa16.03■□□□□ 0.16
VENTXP3-201ENST00000546480 MYH6P13533 1939 aa16.03■□□□□ 0.16
VENTXP3-201ENST00000546480 DDAH1O94760 285 aa16.02■□□□□ 0.16
VENTXP3-201ENST00000546480 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.16
VENTXP3-201ENST00000546480 HMGB1P09429 215 aaKnown RBP16.02■□□□□ 0.16
VENTXP3-201ENST00000546480 CPA1P15085 419 aa16.02■□□□□ 0.16
VENTXP3-201ENST00000546480 CALML3P27482 149 aa16.02■□□□□ 0.16
VENTXP3-201ENST00000546480 KIF5BP33176 963 aa16.02■□□□□ 0.16
VENTXP3-201ENST00000546480 RGS19P49795 217 aa16.02■□□□□ 0.16
VENTXP3-201ENST00000546480 QRICH1Q2TAL8 776 aa16.02■□□□□ 0.16
VENTXP3-201ENST00000546480 PRAMEF19Q5SWL8 479 aa16.02■□□□□ 0.16
VENTXP3-201ENST00000546480 MAP3K21Q5TCX8 1036 aa16.02■□□□□ 0.16
VENTXP3-201ENST00000546480 BLOC1S2Q6QNY1 142 aa16.02■□□□□ 0.16
VENTXP3-201ENST00000546480 DHX32Q7L7V1 743 aaKnown RBP16.02■□□□□ 0.16
VENTXP3-201ENST00000546480 MICU3Q86XE3 530 aa16.02■□□□□ 0.16
VENTXP3-201ENST00000546480 FBXO11Q86XK2 927 aa16.02■□□□□ 0.16
VENTXP3-201ENST00000546480 TINF2Q9BSI4 451 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms