RNA–Protein interactions for RNA: ENST00000545717.1

DDX11-230, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 3

Gene DDX11, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-230ENST00000545717 VPS54Q9P1Q0 977 aa16.8■□□□□ 0.28
DDX11-230ENST00000545717 PNMA3Q9UL41 463 aa16.8■□□□□ 0.28
DDX11-230ENST00000545717 PPP1R9AQ9ULJ8 1098 aa16.8■□□□□ 0.28
DDX11-230ENST00000545717 ABT1Q9ULW3 272 aaKnown RBP16.8■□□□□ 0.28
DDX11-230ENST00000545717 AGTPBP1Q9UPW5 1226 aa16.8■□□□□ 0.28
DDX11-230ENST00000545717 MMP1P03956 469 aa16.79■□□□□ 0.28
DDX11-230ENST00000545717 KRT2P35908 639 aa16.79■□□□□ 0.28
DDX11-230ENST00000545717 GUCY1B3Q02153 619 aa16.79■□□□□ 0.28
DDX11-230ENST00000545717 QRICH1Q2TAL8 776 aa16.79■□□□□ 0.28
DDX11-230ENST00000545717 CATSPERGQ6ZRH7 1159 aa16.79■□□□□ 0.28
DDX11-230ENST00000545717 BRAPQ7Z569 592 aa16.79■□□□□ 0.28
DDX11-230ENST00000545717 GPKOWQ92917 476 aaPredicted RBP eCLIP16.79■□□□□ 0.28
DDX11-230ENST00000545717 AIFM3Q96NN9 605 aa16.79■□□□□ 0.28
DDX11-230ENST00000545717 TLL2Q9Y6L7 1015 aa16.79■□□□□ 0.28
DDX11-230ENST00000545717 PARP14Q460N5 1801 aa16.79■□□□□ 0.28
DDX11-230ENST00000545717 STXBP3O00186 592 aa16.78■□□□□ 0.28
DDX11-230ENST00000545717 HSPA6P17066 643 aa16.78■□□□□ 0.28
DDX11-230ENST00000545717 HOXA7P31268 230 aaPredicted RBP16.78■□□□□ 0.28
DDX11-230ENST00000545717 SLC35G1Q2M3R5 365 aa16.78■□□□□ 0.28
DDX11-230ENST00000545717 FOXD4L5Q5VV16 416 aaPredicted RBP16.78■□□□□ 0.28
DDX11-230ENST00000545717 SPRYD7Q5W111 196 aa16.78■□□□□ 0.28
DDX11-230ENST00000545717 RGMBQ6NW40 437 aa16.78■□□□□ 0.28
DDX11-230ENST00000545717 SAPCD2Q86UD0 394 aa16.78■□□□□ 0.28
DDX11-230ENST00000545717 TEX2Q8IWB9 1127 aa16.78■□□□□ 0.28
DDX11-230ENST00000545717 GTF3C2Q8WUA4 911 aaPredicted RBP16.78■□□□□ 0.28
DDX11-230ENST00000545717 FOXD4L4Q8WXT5 416 aaPredicted RBP16.78■□□□□ 0.28
DDX11-230ENST00000545717 GBP4Q96PP9 640 aa16.78■□□□□ 0.28
DDX11-230ENST00000545717 PHF20Q9BVI0 1012 aa16.78■□□□□ 0.28
DDX11-230ENST00000545717 PCDHA1Q9Y5I3 950 aa16.78■□□□□ 0.28
DDX11-230ENST00000545717 ABCB11O95342 1321 aa16.77■□□□□ 0.28
DDX11-230ENST00000545717 ESYT2A0FGR8 921 aa16.77■□□□□ 0.28
DDX11-230ENST00000545717 DSG3P32926 999 aa16.77■□□□□ 0.28
DDX11-230ENST00000545717 ADCY7P51828 1080 aa16.77■□□□□ 0.28
DDX11-230ENST00000545717 DGKZQ13574 1117 aa16.77■□□□□ 0.28
DDX11-230ENST00000545717 PKP1Q13835 747 aa16.77■□□□□ 0.28
DDX11-230ENST00000545717 CCDC174Q6PII3 467 aa16.77■□□□□ 0.28
DDX11-230ENST00000545717 MB21D1Q8N884 522 aa16.77■□□□□ 0.28
DDX11-230ENST00000545717 CCDC102AQ96A19 550 aa16.77■□□□□ 0.28
DDX11-230ENST00000545717 HHIPL1Q96JK4 782 aa16.77■□□□□ 0.28
DDX11-230ENST00000545717 FOXP1Q9H334 677 aaPredicted RBP16.77■□□□□ 0.28
DDX11-230ENST00000545717 FBXO28Q9NVF7 368 aa16.77■□□□□ 0.28
DDX11-230ENST00000545717 PCDHA4Q9UN74 947 aa16.77■□□□□ 0.28
DDX11-230ENST00000545717 SLC45A1Q9Y2W3 748 aa16.77■□□□□ 0.28
DDX11-230ENST00000545717 CCL15-CCL14A0A0B4J2E2 113 aa16.76■□□□□ 0.27
DDX11-230ENST00000545717 SMCO2A6NFE2 343 aa16.76■□□□□ 0.27
DDX11-230ENST00000545717 MANSC4A6NHS7 340 aaPredicted RBP16.76■□□□□ 0.27
DDX11-230ENST00000545717 ICAM1P05362 532 aa16.76■□□□□ 0.27
DDX11-230ENST00000545717 MRPL12P52815 198 aaKnown RBP16.76■□□□□ 0.27
DDX11-230ENST00000545717 OAZ1P54368 228 aa16.76■□□□□ 0.27
DDX11-230ENST00000545717 CCL15Q16663 113 aa16.76■□□□□ 0.27
DDX11-230ENST00000545717 MCTP2Q6DN12 878 aa16.76■□□□□ 0.27
DDX11-230ENST00000545717 OTUD7BQ6GQQ9 843 aa16.76■□□□□ 0.27
DDX11-230ENST00000545717 RASAL3Q86YV0 1011 aa16.76■□□□□ 0.27
DDX11-230ENST00000545717 DIS3L2Q8IYB7 885 aaKnown RBP16.76■□□□□ 0.27
DDX11-230ENST00000545717 DAGLBQ8NCG7 672 aa16.76■□□□□ 0.27
DDX11-230ENST00000545717 CUL5Q93034 780 aa16.76■□□□□ 0.27
DDX11-230ENST00000545717 SLC38A10Q9HBR0 1119 aa16.76■□□□□ 0.27
DDX11-230ENST00000545717 CCPG1Q9ULG6 757 aa16.76■□□□□ 0.27
DDX11-230ENST00000545717 KCNJ14Q9UNX9 436 aa16.76■□□□□ 0.27
DDX11-230ENST00000545717 MRPL11Q9Y3B7 192 aaKnown RBP16.76■□□□□ 0.27
DDX11-230ENST00000545717 MYH15Q9Y2K3 1946 aa16.76■□□□□ 0.27
DDX11-230ENST00000545717 GOLGA6L22H0YM25 854 aa16.75■□□□□ 0.27
DDX11-230ENST00000545717 GJA5P36382 358 aa16.75■□□□□ 0.27
DDX11-230ENST00000545717 KIF23Q02241 960 aaPredicted RBP16.75■□□□□ 0.27
DDX11-230ENST00000545717 USH1GQ495M9 461 aa16.75■□□□□ 0.27
DDX11-230ENST00000545717 TREML2Q5T2D2 321 aa16.75■□□□□ 0.27
DDX11-230ENST00000545717 FERMT3Q86UX7 667 aa16.75■□□□□ 0.27
DDX11-230ENST00000545717 BLIDQ8IZY5 108 aa16.75■□□□□ 0.27
DDX11-230ENST00000545717 TNPO1Q92973 898 aaKnown RBP16.75■□□□□ 0.27
DDX11-230ENST00000545717 COA7Q96BR5 231 aa16.75■□□□□ 0.27
DDX11-230ENST00000545717 ZNF396Q96N95 335 aaPredicted RBP16.75■□□□□ 0.27
DDX11-230ENST00000545717 ZMYND12Q9H0C1 365 aa16.75■□□□□ 0.27
DDX11-230ENST00000545717 VWA5AO00534 786 aa16.74■□□□□ 0.27
DDX11-230ENST00000545717 SNAP25P60880 206 aa16.74■□□□□ 0.27
DDX11-230ENST00000545717 MKRN3Q13064 507 aaKnown RBP16.74■□□□□ 0.27
DDX11-230ENST00000545717 RESTQ13127 1097 aa16.74■□□□□ 0.27
DDX11-230ENST00000545717 CSPP1Q1MSJ5 1256 aa16.74■□□□□ 0.27
DDX11-230ENST00000545717 ATL3Q6DD88 541 aa16.74■□□□□ 0.27
DDX11-230ENST00000545717 PAXIP1Q6ZW49 1069 aaPredicted RBP16.74■□□□□ 0.27
DDX11-230ENST00000545717 ANKRD23Q86SG2 305 aa16.74■□□□□ 0.27
DDX11-230ENST00000545717 NOSTRINQ8IVI9 506 aa16.74■□□□□ 0.27
DDX11-230ENST00000545717 ATG4CQ96DT6 458 aa16.74■□□□□ 0.27
DDX11-230ENST00000545717 PSTPIP2Q9H939 334 aa16.74■□□□□ 0.27
DDX11-230ENST00000545717 RIC8AQ9NPQ8 531 aa16.74■□□□□ 0.27
DDX11-230ENST00000545717 NOL7Q9UMY1 257 aaKnown RBP16.74■□□□□ 0.27
DDX11-230ENST00000545717 ZDHHC9Q9Y397 364 aa16.74■□□□□ 0.27
DDX11-230ENST00000545717 RBBP6Q7Z6E9 1792 aaKnown RBP16.74■□□□□ 0.27
DDX11-230ENST00000545717 COL11A1P12107 1806 aaPredicted RBP16.73■□□□□ 0.27
DDX11-230ENST00000545717 RLFQ13129 1914 aa16.73■□□□□ 0.27
DDX11-230ENST00000545717 CCDC194A0A1B0GVG4 234 aa16.73■□□□□ 0.27
DDX11-230ENST00000545717 SPDYE16A6NNV3 312 aaPredicted RBP16.73■□□□□ 0.27
DDX11-230ENST00000545717 SLC10A3P09131 477 aa16.73■□□□□ 0.27
DDX11-230ENST00000545717 U2AF2P26368 475 aaKnown RBP eCLIP16.73■□□□□ 0.272e-7■■■□□ 17.2
DDX11-230ENST00000545717 COPB2P35606 906 aa16.73■□□□□ 0.27
DDX11-230ENST00000545717 INHBEP58166 350 aa16.73■□□□□ 0.27
DDX11-230ENST00000545717 SREBF2Q12772 1141 aa16.73■□□□□ 0.27
DDX11-230ENST00000545717 TKFCQ3LXA3 575 aa16.73■□□□□ 0.27
DDX11-230ENST00000545717 KRT25Q7Z3Z0 450 aa16.73■□□□□ 0.27
DDX11-230ENST00000545717 MCF2L2Q86YR7 1114 aa16.73■□□□□ 0.27
DDX11-230ENST00000545717 REXO1Q8N1G1 1221 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms