RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 DCAF4Q8WV16 495 aa18.86■□□□□ 0.61
CHFR-224ENST00000545046 MYO1BO43795 1136 aa18.86■□□□□ 0.61
CHFR-224ENST00000545046 RAD21O60216 631 aa18.86■□□□□ 0.61
CHFR-224ENST00000545046 CCNT1O60563 726 aaKnown RBP18.86■□□□□ 0.61
CHFR-224ENST00000545046 LMOD1P29536 600 aaPredicted RBP18.86■□□□□ 0.61
CHFR-224ENST00000545046 DLGAP5Q15398 846 aa18.86■□□□□ 0.61
CHFR-224ENST00000545046 LETM2Q2VYF4 491 aa18.86■□□□□ 0.61
CHFR-224ENST00000545046 TTBK2Q6IQ55 1244 aa18.86■□□□□ 0.61
CHFR-224ENST00000545046 SPDYE2BA6NHP3 402 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 SPDYE6P0CI01 402 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 ICA1Q05084 483 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 ORC2Q13416 577 aaPredicted RBP18.85■□□□□ 0.61
CHFR-224ENST00000545046 SEPT2Q15019 361 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 E2F4Q16254 413 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 JAKMIP3Q5VZ66 844 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 GSDMAQ96QA5 445 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 CSRNP1Q96S65 589 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 TMEM60Q9H2L4 133 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 IFNKQ9P0W0 207 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 ZBTB5O15062 677 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 SLC16A2P36021 539 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 RBM26Q5T8P6 1007 aaKnown RBP18.85■□□□□ 0.61
CHFR-224ENST00000545046 SLFN13Q68D06 897 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 NIM1KQ8IY84 436 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 TBCKQ8TEA7 893 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 PIM2Q9P1W9 311 aa18.85■□□□□ 0.61
CHFR-224ENST00000545046 GDF11O95390 407 aa18.84■□□□□ 0.61
CHFR-224ENST00000545046 SLC1A4P43007 532 aa18.84■□□□□ 0.61
CHFR-224ENST00000545046 TGFB2P61812 414 aa18.84■□□□□ 0.61
CHFR-224ENST00000545046 FANCCQ00597 558 aa18.84■□□□□ 0.61
CHFR-224ENST00000545046 DPYDQ12882 1025 aa18.84■□□□□ 0.61
CHFR-224ENST00000545046 NOLC1Q14978 699 aaKnown RBP eCLIP18.84■□□□□ 0.61
CHFR-224ENST00000545046 CT47A1Q5JQC4 288 aaPredicted RBP18.84■□□□□ 0.61
CHFR-224ENST00000545046 GMLQ99445 158 aa18.84■□□□□ 0.61
CHFR-224ENST00000545046 XPO4Q9C0E2 1151 aaKnown RBP18.84■□□□□ 0.61
CHFR-224ENST00000545046 TCP10L2B9ZVM9 353 aa18.83■□□□□ 0.61
CHFR-224ENST00000545046 OR52Z1P0C646 297 aa18.83■□□□□ 0.61
CHFR-224ENST00000545046 RIC8AQ9NPQ8 531 aa18.83■□□□□ 0.61
CHFR-224ENST00000545046 TMEM260Q9NX78 707 aa18.83■□□□□ 0.61
CHFR-224ENST00000545046 HERC5Q9UII4 1024 aaKnown RBP18.83■□□□□ 0.61
CHFR-224ENST00000545046 ZNRF3Q9ULT6 936 aa18.83■□□□□ 0.61
CHFR-224ENST00000545046 ARFGEF1Q9Y6D6 1849 aa18.83■□□□□ 0.61
CHFR-224ENST00000545046 USP17L10C9JJH3 530 aa18.83■□□□□ 0.6
CHFR-224ENST00000545046 CBFA2T2O43439 604 aa18.83■□□□□ 0.6
CHFR-224ENST00000545046 NEMFO60524 1076 aa18.83■□□□□ 0.6
CHFR-224ENST00000545046 UBA7P41226 1012 aa18.83■□□□□ 0.6
CHFR-224ENST00000545046 SHROOM1Q2M3G4 852 aaPredicted RBP18.83■□□□□ 0.6
CHFR-224ENST00000545046 CCDC144BQ3MJ40 725 aa18.83■□□□□ 0.6
CHFR-224ENST00000545046 PDXDC2PQ6P474 469 aa18.83■□□□□ 0.6
CHFR-224ENST00000545046 RASSF8Q8NHQ8 419 aa18.83■□□□□ 0.6
CHFR-224ENST00000545046 MTMR8Q96EF0 704 aa18.83■□□□□ 0.6
CHFR-224ENST00000545046 ZNF70Q9UC06 446 aaPredicted RBP18.83■□□□□ 0.6
CHFR-224ENST00000545046 STAT6P42226 847 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 KIAA1524Q8TCG1 905 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 HSD3B7Q9H2F3 369 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.82■□□□□ 0.6
CHFR-224ENST00000545046 FANCLQ9NW38 375 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 IMPACTQ9P2X3 320 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 CLRN2A0PK11 232 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 GTPBP6O43824 516 aaPredicted RBP18.82■□□□□ 0.6
CHFR-224ENST00000545046 SERPINC1P01008 464 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 ERCC5P28715 1186 aaPredicted RBP18.82■□□□□ 0.6
CHFR-224ENST00000545046 CDC25AP30304 524 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 MRPL12P52815 198 aaKnown RBP18.82■□□□□ 0.6
CHFR-224ENST00000545046 KARSQ15046 597 aaKnown RBP18.82■□□□□ 0.6
CHFR-224ENST00000545046 SIAH1Q8IUQ4 282 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 AGBL3Q8NEM8 1001 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 ENOX1Q8TC92 643 aaKnown RBP18.82■□□□□ 0.6
CHFR-224ENST00000545046 FAM151AQ8WW52 585 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 CUL5Q93034 780 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 AK8Q96MA6 479 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 CCSER1Q9C0I3 900 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 DISC1Q9NRI5 854 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 PYCARDQ9ULZ3 195 aa18.82■□□□□ 0.6
CHFR-224ENST00000545046 ZBTB12Q9Y330 459 aaPredicted RBP18.82■□□□□ 0.6
CHFR-224ENST00000545046 COL4A5P29400 1685 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 PPP1R11O60927 126 aaPredicted RBP18.81■□□□□ 0.6
CHFR-224ENST00000545046 POLD1P28340 1107 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 CASP1P29466 404 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 RRAGBQ5VZM2 374 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 FILIP1Q7Z7B0 1213 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 GMCL1P1Q8NEA9 526 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 STAMQ92783 540 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 F5H6K3 240 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 ZBTB7AO95365 584 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 GH2P01242 217 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 ATP1A3P13637 1013 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 UBASH3AP57075 661 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 GSDMDP57764 484 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 KLRC3Q07444 240 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 CACTINQ8WUQ7 758 aaKnown RBP18.81■□□□□ 0.6
CHFR-224ENST00000545046 NAP1L5Q96NT1 182 aaPredicted RBP18.81■□□□□ 0.6
CHFR-224ENST00000545046 GLT8D2Q9H1C3 349 aa18.81■□□□□ 0.6
CHFR-224ENST00000545046 LRMPQ12912 555 aa18.8■□□□□ 0.6
CHFR-224ENST00000545046 DALRD3Q5D0E6 543 aaKnown RBP18.8■□□□□ 0.6
CHFR-224ENST00000545046 LRRC8AQ8IWT6 810 aa18.8■□□□□ 0.6
CHFR-224ENST00000545046 DHX8Q14562 1220 aaKnown RBP18.79■□□□□ 0.6
CHFR-224ENST00000545046 SPDYE2Q495Y8 402 aa18.79■□□□□ 0.6
CHFR-224ENST00000545046 TMC6Q7Z403 805 aa18.79■□□□□ 0.6
CHFR-224ENST00000545046 CCDC125Q86Z20 511 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms