RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 OLFML2BQ68BL8 750 aa19.8■□□□□ 0.76
CD9-209ENST00000540891 CCDC174Q6PII3 467 aa19.8■□□□□ 0.76
CD9-209ENST00000540891 MAML3Q96JK9 1138 aa19.8■□□□□ 0.76
CD9-209ENST00000540891 DEFB118Q96PH6 123 aa19.8■□□□□ 0.76
CD9-209ENST00000540891 HMX1Q9NP08 348 aaPredicted RBP19.8■□□□□ 0.76
CD9-209ENST00000540891 SGPL1O95470 568 aa19.79■□□□□ 0.76
CD9-209ENST00000540891 CCND3P30281 292 aaPredicted RBP19.79■□□□□ 0.76
CD9-209ENST00000540891 CYP2C19P33261 490 aa19.79■□□□□ 0.76
CD9-209ENST00000540891 ZNF792Q3KQV3 632 aa19.79■□□□□ 0.76
CD9-209ENST00000540891 GPATCH4Q5T3I0 446 aaKnown RBP19.79■□□□□ 0.76
CD9-209ENST00000540891 CHST13Q8NET6 341 aa19.79■□□□□ 0.76
CD9-209ENST00000540891 CRISPLD2Q9H0B8 497 aa19.79■□□□□ 0.76
CD9-209ENST00000540891 CPVLQ9H3G5 476 aa19.79■□□□□ 0.76
CD9-209ENST00000540891 MKI67P46013 3256 aaKnown RBP19.79■□□□□ 0.76
CD9-209ENST00000540891 DNAJC25-GNG10A0A024R161 153 aa19.78■□□□□ 0.76
CD9-209ENST00000540891 IFIT3O14879 490 aaKnown RBP19.78■□□□□ 0.76
CD9-209ENST00000540891 MFSD14CQ5VZR4 134 aa19.78■□□□□ 0.76
CD9-209ENST00000540891 IGDCC4Q8TDY8 1250 aa19.78■□□□□ 0.76
CD9-209ENST00000540891 UBA5Q9GZZ9 404 aa19.78■□□□□ 0.76
CD9-209ENST00000540891 HOMER2Q9NSB8 354 aa19.78■□□□□ 0.76
CD9-209ENST00000540891 ZNFX1Q9P2E3 1918 aaKnown RBP19.78■□□□□ 0.76
CD9-209ENST00000540891 ICAM1P05362 532 aa19.77■□□□□ 0.76
CD9-209ENST00000540891 TRPV1Q8NER1 839 aa19.77■□□□□ 0.76
CD9-209ENST00000540891 GPHNQ9NQX3 736 aaPredicted RBP19.77■□□□□ 0.76
CD9-209ENST00000540891 RNF146Q9NTX7 359 aa19.77■□□□□ 0.76
CD9-209ENST00000540891 SLC5A4Q9NY91 659 aa19.77■□□□□ 0.76
CD9-209ENST00000540891 FBXO40Q9UH90 709 aa19.77■□□□□ 0.76
CD9-209ENST00000540891 DIS3Q9Y2L1 958 aaKnown RBP19.77■□□□□ 0.76
CD9-209ENST00000540891 ALAS1P13196 640 aa19.76■□□□□ 0.75
CD9-209ENST00000540891 WTAPQ15007 396 aa19.76■□□□□ 0.75
CD9-209ENST00000540891 TKFCQ3LXA3 575 aa19.76■□□□□ 0.75
CD9-209ENST00000540891 ASPRV1Q53RT3 343 aa19.76■□□□□ 0.75
CD9-209ENST00000540891 MUM1L1Q5H9M0 696 aa19.76■□□□□ 0.75
CD9-209ENST00000540891 UBE2Q1Q7Z7E8 422 aa19.76■□□□□ 0.75
CD9-209ENST00000540891 RASEFQ8IZ41 740 aa19.76■□□□□ 0.75
CD9-209ENST00000540891 STAG2Q8N3U4 1231 aa19.76■□□□□ 0.75
CD9-209ENST00000540891 FGD4Q96M96 766 aa19.76■□□□□ 0.75
CD9-209ENST00000540891 TRERF1Q96PN7 1200 aa19.76■□□□□ 0.75
CD9-209ENST00000540891 ACAD9Q9H845 621 aa19.76■□□□□ 0.75
CD9-209ENST00000540891 CCPG1Q9ULG6 757 aa19.76■□□□□ 0.75
CD9-209ENST00000540891 PRC1O43663 620 aa19.75■□□□□ 0.75
CD9-209ENST00000540891 PARP1P09874 1014 aaKnown RBP19.75■□□□□ 0.75
CD9-209ENST00000540891 CYBAP13498 195 aa19.75■□□□□ 0.75
CD9-209ENST00000540891 TSGA10IPQ3SY00 556 aa19.75■□□□□ 0.75
CD9-209ENST00000540891 TMEM67Q5HYA8 995 aa19.75■□□□□ 0.75
CD9-209ENST00000540891 ANKRD35Q8N283 1001 aa19.75■□□□□ 0.75
CD9-209ENST00000540891 DDX11Q96FC9 970 aa19.75■□□□□ 0.75
CD9-209ENST00000540891 LY9Q9HBG7 655 aa19.75■□□□□ 0.75
CD9-209ENST00000540891 A1CFQ9NQ94 594 aaKnown RBP19.75■□□□□ 0.75
CD9-209ENST00000540891 PLXNA1Q9UIW2 1896 aa19.74■□□□□ 0.75
CD9-209ENST00000540891 ERICH2A1L162 156 aa19.74■□□□□ 0.75
CD9-209ENST00000540891 PALM3A6NDB9 673 aaPredicted RBP19.74■□□□□ 0.75
CD9-209ENST00000540891 TROAPQ12815 778 aa19.74■□□□□ 0.75
CD9-209ENST00000540891 SART3Q15020 963 aaKnown RBP19.74■□□□□ 0.75
CD9-209ENST00000540891 RNF20Q5VTR2 975 aa19.74■□□□□ 0.75
CD9-209ENST00000540891 LHX8Q68G74 356 aa19.74■□□□□ 0.75
CD9-209ENST00000540891 MTA3Q9BTC8 594 aa19.74■□□□□ 0.75
CD9-209ENST00000540891 MAD2L2Q9UI95 211 aa19.74■□□□□ 0.75
CD9-209ENST00000540891 SMCHD1A6NHR9 2005 aa19.74■□□□□ 0.75
CD9-209ENST00000540891 WDR19Q8NEZ3 1342 aa19.74■□□□□ 0.75
CD9-209ENST00000540891 TNRC18O15417 2968 aaPredicted RBP19.73■□□□□ 0.75
CD9-209ENST00000540891 SH2B2O14492 632 aaPredicted RBP19.73■□□□□ 0.75
CD9-209ENST00000540891 TFRCP02786 760 aaKnown RBP19.73■□□□□ 0.75
CD9-209ENST00000540891 MCM5P33992 734 aa19.73■□□□□ 0.75
CD9-209ENST00000540891 GRM4Q14833 912 aa19.73■□□□□ 0.75
CD9-209ENST00000540891 SLC35G1Q2M3R5 365 aa19.73■□□□□ 0.75
CD9-209ENST00000540891 ADCK5Q3MIX3 580 aa19.73■□□□□ 0.75
CD9-209ENST00000540891 PRAMEF19Q5SWL8 479 aa19.73■□□□□ 0.75
CD9-209ENST00000540891 ADGRF4Q8IZF3 695 aa19.73■□□□□ 0.75
CD9-209ENST00000540891 KCNB2Q92953 911 aa19.73■□□□□ 0.75
CD9-209ENST00000540891 TINF2Q9BSI4 451 aa19.73■□□□□ 0.75
CD9-209ENST00000540891 OGDHLQ9ULD0 1010 aa19.73■□□□□ 0.75
CD9-209ENST00000540891 MNX1P50219 401 aaPredicted RBP19.72■□□□□ 0.75
CD9-209ENST00000540891 CNTN2Q02246 1040 aa19.72■□□□□ 0.75
CD9-209ENST00000540891 CDC37Q16543 378 aaPredicted RBP19.72■□□□□ 0.75
CD9-209ENST00000540891 FAM133AQ8N9E0 248 aa19.72■□□□□ 0.75
CD9-209ENST00000540891 CLEC4DQ8WXI8 215 aa19.72■□□□□ 0.75
CD9-209ENST00000540891 TMEM87BQ96K49 555 aa19.72■□□□□ 0.75
CD9-209ENST00000540891 JMJD4Q9H9V9 463 aa19.72■□□□□ 0.75
CD9-209ENST00000540891 KLRF2D3W0D1 207 aa19.71■□□□□ 0.75
CD9-209ENST00000540891 NFIBO00712 420 aa19.71■□□□□ 0.75
CD9-209ENST00000540891 CAPN2P17655 700 aa19.71■□□□□ 0.75
CD9-209ENST00000540891 HSPA4P34932 840 aa19.71■□□□□ 0.75
CD9-209ENST00000540891 MAMDC4Q6UXC1 1216 aa19.71■□□□□ 0.75
CD9-209ENST00000540891 ZNF467Q7Z7K2 595 aaPredicted RBP19.71■□□□□ 0.75
CD9-209ENST00000540891 NEK1Q96PY6 1258 aa19.71■□□□□ 0.75
CD9-209ENST00000540891 LRRC2Q9BYS8 371 aa19.71■□□□□ 0.75
CD9-209ENST00000540891 CYP39A1Q9NYL5 469 aa19.71■□□□□ 0.75
CD9-209ENST00000540891 DDX20Q9UHI6 824 aaKnown RBP19.71■□□□□ 0.75
CD9-209ENST00000540891 ASTN1O14525 1302 aa19.71■□□□□ 0.75
CD9-209ENST00000540891 FARP2O94887 1054 aaPredicted RBP19.7■□□□□ 0.74
CD9-209ENST00000540891 SNAI1O95863 264 aaPredicted RBP19.7■□□□□ 0.74
CD9-209ENST00000540891 EXOSC10Q01780 885 aaKnown RBP19.7■□□□□ 0.74
CD9-209ENST00000540891 MSL3Q8N5Y2 521 aaKnown RBP19.7■□□□□ 0.74
CD9-209ENST00000540891 DIS3LQ8TF46 1054 aaKnown RBP19.7■□□□□ 0.74
CD9-209ENST00000540891 MTMR8Q96EF0 704 aa19.7■□□□□ 0.74
CD9-209ENST00000540891 VAT1LQ9HCJ6 419 aa19.7■□□□□ 0.74
CD9-209ENST00000540891 PNMA2Q9UL42 364 aa19.7■□□□□ 0.74
CD9-209ENST00000540891 SOWAHBA6NEL2 793 aa19.69■□□□□ 0.74
CD9-209ENST00000540891 POTEB2H3BUK9 544 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms