RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 CACNB2Q08289 660 aaPredicted RBP15.67■□□□□ 0.1
CCDC130-202ENST00000540216 U2AF1L4Q8WU68 220 aaKnown RBP15.67■□□□□ 0.1
CCDC130-202ENST00000540216 REC8O95072 547 aa15.66■□□□□ 0.1
CCDC130-202ENST00000540216 SGPL1O95470 568 aa15.66■□□□□ 0.1
CCDC130-202ENST00000540216 ICAM1P05362 532 aa15.66■□□□□ 0.1
CCDC130-202ENST00000540216 PARP1P09874 1014 aaKnown RBP15.66■□□□□ 0.1
CCDC130-202ENST00000540216 SLC4A3P48751 1232 aa15.66■□□□□ 0.1
CCDC130-202ENST00000540216 TRIM32Q13049 653 aa15.66■□□□□ 0.1
CCDC130-202ENST00000540216 WTAPQ15007 396 aa15.66■□□□□ 0.1
CCDC130-202ENST00000540216 CCDC174Q6PII3 467 aa15.66■□□□□ 0.1
CCDC130-202ENST00000540216 DDX11Q96FC9 970 aa15.66■□□□□ 0.1
CCDC130-202ENST00000540216 MAML3Q96JK9 1138 aa15.66■□□□□ 0.1
CCDC130-202ENST00000540216 ACAD9Q9H845 621 aa15.66■□□□□ 0.1
CCDC130-202ENST00000540216 FLRT1Q9NZU1 646 aa15.66■□□□□ 0.1
CCDC130-202ENST00000540216 CCPG1Q9ULG6 757 aa15.66■□□□□ 0.1
CCDC130-202ENST00000540216 CENPFP49454 3210 aa15.66■□□□□ 0.1
CCDC130-202ENST00000540216 ZNFX1Q9P2E3 1918 aaKnown RBP15.65■□□□□ 0.1
CCDC130-202ENST00000540216 DNAJC25-GNG10A0A024R161 153 aa15.65■□□□□ 0.1
CCDC130-202ENST00000540216 EPB41L2O43491 1005 aaKnown RBP15.65■□□□□ 0.1
CCDC130-202ENST00000540216 MCM5P33992 734 aa15.65■□□□□ 0.1
CCDC130-202ENST00000540216 ANTXR2P58335 489 aa15.65■□□□□ 0.1
CCDC130-202ENST00000540216 ZNF792Q3KQV3 632 aa15.65■□□□□ 0.1
CCDC130-202ENST00000540216 TSGA10IPQ3SY00 556 aa15.65■□□□□ 0.1
CCDC130-202ENST00000540216 TMEM67Q5HYA8 995 aa15.65■□□□□ 0.1
CCDC130-202ENST00000540216 MSL3Q8N5Y2 521 aaKnown RBP15.65■□□□□ 0.1
CCDC130-202ENST00000540216 SHISA4Q96DD7 197 aa15.65■□□□□ 0.1
CCDC130-202ENST00000540216 TMEM87BQ96K49 555 aa15.65■□□□□ 0.1
CCDC130-202ENST00000540216 AGBL1Q96MI9 1066 aa15.65■□□□□ 0.1
CCDC130-202ENST00000540216 DEFB118Q96PH6 123 aa15.65■□□□□ 0.1
CCDC130-202ENST00000540216 CRISPLD2Q9H0B8 497 aa15.65■□□□□ 0.1
CCDC130-202ENST00000540216 RNF146Q9NTX7 359 aa15.65■□□□□ 0.1
CCDC130-202ENST00000540216 PFASO15067 1338 aa15.65■□□□□ 0.1
CCDC130-202ENST00000540216 WDR19Q8NEZ3 1342 aa15.65■□□□□ 0.1
CCDC130-202ENST00000540216 PRC1O43663 620 aa15.64■□□□□ 0.09
CCDC130-202ENST00000540216 MSCO60682 206 aa15.64■□□□□ 0.09
CCDC130-202ENST00000540216 PGK2P07205 417 aa15.64■□□□□ 0.09
CCDC130-202ENST00000540216 GOLGA8HP0CJ92 632 aa15.64■□□□□ 0.09
CCDC130-202ENST00000540216 ALAS1P13196 640 aa15.64■□□□□ 0.09
CCDC130-202ENST00000540216 KRT32Q14532 448 aa15.64■□□□□ 0.09
CCDC130-202ENST00000540216 ANKRD35Q8N283 1001 aa15.64■□□□□ 0.09
CCDC130-202ENST00000540216 TMTC2Q8N394 836 aa15.64■□□□□ 0.09
CCDC130-202ENST00000540216 IGDCC4Q8TDY8 1250 aa15.64■□□□□ 0.09
CCDC130-202ENST00000540216 TRERF1Q96PN7 1200 aa15.64■□□□□ 0.09
CCDC130-202ENST00000540216 HOMER2Q9NSB8 354 aa15.64■□□□□ 0.09
CCDC130-202ENST00000540216 NRBP1Q9UHY1 535 aa15.64■□□□□ 0.09
CCDC130-202ENST00000540216 PLXNA1Q9UIW2 1896 aa15.63■□□□□ 0.09
CCDC130-202ENST00000540216 CYBAP13498 195 aa15.63■□□□□ 0.09
CCDC130-202ENST00000540216 CYP2C19P33261 490 aa15.63■□□□□ 0.09
CCDC130-202ENST00000540216 SNAP25P60880 206 aa15.63■□□□□ 0.09
CCDC130-202ENST00000540216 CHST3Q7LGC8 479 aa15.63■□□□□ 0.09
CCDC130-202ENST00000540216 CATIPQ7Z7H3 387 aa15.63■□□□□ 0.09
CCDC130-202ENST00000540216 ZNF467Q7Z7K2 595 aaPredicted RBP15.63■□□□□ 0.09
CCDC130-202ENST00000540216 DDAH1O94760 285 aa15.62■□□□□ 0.09
CCDC130-202ENST00000540216 TFRCP02786 760 aaKnown RBP15.62■□□□□ 0.09
CCDC130-202ENST00000540216 CCND3P30281 292 aaPredicted RBP15.62■□□□□ 0.09
CCDC130-202ENST00000540216 GRM4Q14833 912 aa15.62■□□□□ 0.09
CCDC130-202ENST00000540216 ADGRF4Q8IZF3 695 aa15.62■□□□□ 0.09
CCDC130-202ENST00000540216 ANKLE1Q8NAG6 615 aa15.62■□□□□ 0.09
CCDC130-202ENST00000540216 NEK1Q96PY6 1258 aa15.62■□□□□ 0.09
CCDC130-202ENST00000540216 TINF2Q9BSI4 451 aa15.62■□□□□ 0.09
CCDC130-202ENST00000540216 MAF1Q9H063 256 aa15.62■□□□□ 0.09
CCDC130-202ENST00000540216 LY9Q9HBG7 655 aa15.62■□□□□ 0.09
CCDC130-202ENST00000540216 A1CFQ9NQ94 594 aaKnown RBP15.62■□□□□ 0.09
CCDC130-202ENST00000540216 SYNGAP1Q96PV0 1343 aa15.62■□□□□ 0.09
CCDC130-202ENST00000540216 PALM3A6NDB9 673 aaPredicted RBP15.61■□□□□ 0.09
CCDC130-202ENST00000540216 KLRF2D3W0D1 207 aa15.61■□□□□ 0.09
CCDC130-202ENST00000540216 SH2B2O14492 632 aaPredicted RBP15.61■□□□□ 0.09
CCDC130-202ENST00000540216 FARP2O94887 1054 aaPredicted RBP15.61■□□□□ 0.09
CCDC130-202ENST00000540216 HMGB1P09429 215 aaKnown RBP15.61■□□□□ 0.09
CCDC130-202ENST00000540216 HSPA4P34932 840 aa15.61■□□□□ 0.09
CCDC130-202ENST00000540216 LIFRP42702 1097 aa15.61■□□□□ 0.09
CCDC130-202ENST00000540216 TROAPQ12815 778 aa15.61■□□□□ 0.09
CCDC130-202ENST00000540216 CDC37Q16543 378 aaPredicted RBP15.61■□□□□ 0.09
CCDC130-202ENST00000540216 MAMDC4Q6UXC1 1216 aa15.61■□□□□ 0.09
CCDC130-202ENST00000540216 KCNB2Q92953 911 aa15.61■□□□□ 0.09
CCDC130-202ENST00000540216 MAP3K14Q99558 947 aa15.61■□□□□ 0.09
CCDC130-202ENST00000540216 UBA5Q9GZZ9 404 aa15.61■□□□□ 0.09
CCDC130-202ENST00000540216 SENP2Q9HC62 589 aa15.61■□□□□ 0.09
CCDC130-202ENST00000540216 MAD2L2Q9UI95 211 aa15.61■□□□□ 0.09
CCDC130-202ENST00000540216 OGDHLQ9ULD0 1010 aa15.61■□□□□ 0.09
CCDC130-202ENST00000540216 POTEB2H3BUK9 544 aa15.6■□□□□ 0.09
CCDC130-202ENST00000540216 DHX16O60231 1041 aaKnown RBP15.6■□□□□ 0.09
CCDC130-202ENST00000540216 KIF5BP33176 963 aa15.6■□□□□ 0.09
CCDC130-202ENST00000540216 MUM1L1Q5H9M0 696 aa15.6■□□□□ 0.09
CCDC130-202ENST00000540216 UBE2Q1Q7Z7E8 422 aa15.6■□□□□ 0.09
CCDC130-202ENST00000540216 RASEFQ8IZ41 740 aa15.6■□□□□ 0.09
CCDC130-202ENST00000540216 ZNF654Q8IZM8 581 aa15.6■□□□□ 0.09
CCDC130-202ENST00000540216 STAG2Q8N3U4 1231 aa15.6■□□□□ 0.09
CCDC130-202ENST00000540216 FAM133AQ8N9E0 248 aa15.6■□□□□ 0.09
CCDC130-202ENST00000540216 CPVLQ9H3G5 476 aa15.6■□□□□ 0.09
CCDC130-202ENST00000540216 DDX20Q9UHI6 824 aaKnown RBP15.6■□□□□ 0.09
CCDC130-202ENST00000540216 CNPY2Q9Y2B0 182 aa15.6■□□□□ 0.09
CCDC130-202ENST00000540216 PDE4DIPQ5VU43 2346 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 CCDC69A6NI79 296 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 SEPT4O43236 478 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 CALM1P0DP23 149 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 CALM2P0DP24 149 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 CALM3P0DP25 149 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 CNGA1P29973 690 aa15.59■□□□□ 0.09
CCDC130-202ENST00000540216 TRAF1Q13077 416 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms