RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 TMPRSS13Q9BYE2 586 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 NRSN2Q9GZP1 204 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 SOX17Q9H6I2 414 aaPredicted RBP5.32□□□□□ -1.56
C2CD3-214ENST00000540057 ANO2Q9NQ90 1003 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 ZNRF3Q9ULT6 936 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 A0A0C4DFX4 3053 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 HTTP42858 3142 aa5.32□□□□□ -1.56
C2CD3-214ENST00000540057 LOC100289279A0A1B0GTE1 492 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 METTL12A8MUP2 240 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 ADM5C9JUS6 153 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 TCERG1O14776 1098 aaKnown RBP5.31□□□□□ -1.56
C2CD3-214ENST00000540057 ADAMTS4O75173 837 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 RAD17O75943 681 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 TIAF1O95411 115 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 ESRRAP11474 423 aaPredicted RBP5.31□□□□□ -1.56
C2CD3-214ENST00000540057 PIP4K2AP48426 406 aaPredicted RBP5.31□□□□□ -1.56
C2CD3-214ENST00000540057 IKBKEQ14164 716 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 ECM1Q16610 540 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 INTS3Q68E01 1043 aaKnown RBP5.31□□□□□ -1.56
C2CD3-214ENST00000540057 BEND4Q6ZU67 534 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 KRT26Q7Z3Y9 468 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 NPM2Q86SE8 214 aaKnown RBP5.31□□□□□ -1.56
C2CD3-214ENST00000540057 CLEC10AQ8IUN9 316 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 TTC5Q8N0Z6 440 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 FAM83CQ9BQN1 747 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 BCL2L13Q9BXK5 485 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 TEX13AQ9BXU3 409 aaPredicted RBP5.31□□□□□ -1.56
C2CD3-214ENST00000540057 VPS33BQ9H267 617 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 ZFYVE28Q9HCC9 887 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 CNOT7Q9UIV1 285 aaKnown RBP5.31□□□□□ -1.56
C2CD3-214ENST00000540057 NIP7Q9Y221 180 aaKnown RBP eCLIP5.31□□□□□ -1.56
C2CD3-214ENST00000540057 HIF3AQ9Y2N7 669 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 CENPFP49454 3210 aa5.31□□□□□ -1.56
C2CD3-214ENST00000540057 KIAA0100Q14667 2235 aaKnown RBP5.31□□□□□ -1.56
C2CD3-214ENST00000540057 ABCC12Q96J65 1359 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 TRIOBPQ9H2D6 2365 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 BRCA2P51587 3418 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 H0YGN5 161 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 H7C1D1 291 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 FKTNO75072 461 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 COBLO75128 1261 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 ABL1P00519 1130 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 POLR3DP05423 398 aaPredicted RBP5.3□□□□□ -1.56
C2CD3-214ENST00000540057 HOXA10P31260 410 aaPredicted RBP5.3□□□□□ -1.56
C2CD3-214ENST00000540057 TNIP1Q15025 636 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 MCTP1Q6DN14 999 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 FDX2Q6P4F2 183 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 ZNF790Q6PG37 636 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 SHKBP1Q8TBC3 707 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 R3HDMLQ9H3Y0 253 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 SUGCTQ9HAC7 445 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 ZNF652Q9Y2D9 606 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 RIC1Q4ADV7 1423 aa5.3□□□□□ -1.56
C2CD3-214ENST00000540057 SIPA1L3O60292 1781 aaPredicted RBP5.29□□□□□ -1.56
C2CD3-214ENST00000540057 KIF7Q2M1P5 1343 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 YDJCA8MPS7 323 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 SART1O43290 800 aaKnown RBP5.29□□□□□ -1.56
C2CD3-214ENST00000540057 ICMTO60725 284 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 IL13P35225 146 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 TM4SF4P48230 202 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 SERPINB4P48594 390 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 ARL4DP49703 201 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 AAMPQ13685 434 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 HLFQ16534 295 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 MTHFSDQ2M296 383 aaKnown RBP5.29□□□□□ -1.56
C2CD3-214ENST00000540057 TBC1D10BQ4KMP7 808 aaPredicted RBP5.29□□□□□ -1.56
C2CD3-214ENST00000540057 SGO2Q562F6 1265 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 SMG8Q8ND04 991 aaKnown RBP5.29□□□□□ -1.56
C2CD3-214ENST00000540057 ASAP3Q8TDY4 903 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 RPGRQ92834 1020 aaKnown RBP5.29□□□□□ -1.56
C2CD3-214ENST00000540057 DCPSQ96C86 337 aaKnown RBP5.29□□□□□ -1.56
C2CD3-214ENST00000540057 CDCA5Q96FF9 252 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 CRAMP1Q96RY5 1269 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 TCF12Q99081 682 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 USP26Q9BXU7 913 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 RTFDC1Q9BY42 306 aaPredicted RBP5.29□□□□□ -1.56
C2CD3-214ENST00000540057 EGFL7Q9UHF1 273 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 MTMR7Q9Y216 660 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 TRIM17Q9Y577 477 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 USP16Q9Y5T5 823 aa5.29□□□□□ -1.56
C2CD3-214ENST00000540057 OAS3Q9Y6K5 1087 aaKnown RBP5.29□□□□□ -1.56
C2CD3-214ENST00000540057 A0A1W2PP55 124 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 PRAMEF22A3QJZ6 481 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 MAP4P27816 1152 aaKnown RBP5.28□□□□□ -1.56
C2CD3-214ENST00000540057 KIAA2012Q0VF49 1180 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 MOB2Q70IA6 237 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 OTOP1Q7RTM1 612 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 DTX1Q86Y01 620 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 KRTAP1-3Q8IUG1 177 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 CCNJLQ8IV13 435 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 GALNT12Q8IXK2 581 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 SUPT20HQ8NEM7 779 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 DPF2Q92785 391 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 ARMC5Q96C12 935 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 FMNL2Q96PY5 1086 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 KCNF1Q9H3M0 494 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 USTQ9Y2C2 406 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 ATP6V0A2Q9Y487 856 aa5.28□□□□□ -1.56
C2CD3-214ENST00000540057 ASTN2O75129 1339 aaPredicted RBP5.27□□□□□ -1.57
C2CD3-214ENST00000540057 H3BRB1 525 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms