RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ZNF213O14771 459 aa22.48■■□□□ 1.19
TNFRSF1A-212ENST00000539372 SNAI1O95863 264 aaPredicted RBP22.48■■□□□ 1.19
TNFRSF1A-212ENST00000539372 RARBP10826 455 aa22.48■■□□□ 1.19
TNFRSF1A-212ENST00000539372 MAGEA10P43363 369 aaPredicted RBP22.48■■□□□ 1.19
TNFRSF1A-212ENST00000539372 TTBK2Q6IQ55 1244 aa22.48■■□□□ 1.19
TNFRSF1A-212ENST00000539372 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.48■■□□□ 1.19
TNFRSF1A-212ENST00000539372 DCAF4Q8WV16 495 aa22.48■■□□□ 1.19
TNFRSF1A-212ENST00000539372 GDF15Q99988 308 aa22.48■■□□□ 1.19
TNFRSF1A-212ENST00000539372 ACAD9Q9H845 621 aa22.48■■□□□ 1.19
TNFRSF1A-212ENST00000539372 XPNPEP3Q9NQH7 507 aa22.48■■□□□ 1.19
TNFRSF1A-212ENST00000539372 RNF146Q9NTX7 359 aa22.48■■□□□ 1.19
TNFRSF1A-212ENST00000539372 FRMPD2Q68DX3 1309 aaPredicted RBP22.48■■□□□ 1.19
TNFRSF1A-212ENST00000539372 PGK1P00558 417 aa22.47■■□□□ 1.19
TNFRSF1A-212ENST00000539372 PCP11498 1178 aaKnown RBP22.47■■□□□ 1.19
TNFRSF1A-212ENST00000539372 ALAS1P13196 640 aa22.47■■□□□ 1.19
TNFRSF1A-212ENST00000539372 SLC16A2P36021 539 aa22.47■■□□□ 1.19
TNFRSF1A-212ENST00000539372 MAMDC4Q6UXC1 1216 aa22.47■■□□□ 1.19
TNFRSF1A-212ENST00000539372 MSL3Q8N5Y2 521 aaKnown RBP22.47■■□□□ 1.19
TNFRSF1A-212ENST00000539372 FGD4Q96M96 766 aa22.47■■□□□ 1.19
TNFRSF1A-212ENST00000539372 RNF41Q9H4P4 317 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF1A-212ENST00000539372 ZHX1Q9UKY1 873 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF1A-212ENST00000539372 SYNGAP1Q96PV0 1343 aa22.47■■□□□ 1.19
TNFRSF1A-212ENST00000539372 AKR1A1P14550 325 aa22.46■■□□□ 1.19
TNFRSF1A-212ENST00000539372 GSPT1P15170 499 aaKnown RBP22.46■■□□□ 1.19
TNFRSF1A-212ENST00000539372 ADCYAP1R1P41586 468 aa22.46■■□□□ 1.19
TNFRSF1A-212ENST00000539372 RTP1P59025 263 aa22.46■■□□□ 1.19
TNFRSF1A-212ENST00000539372 TTC22Q5TAA0 569 aa22.46■■□□□ 1.19
TNFRSF1A-212ENST00000539372 ZNF467Q7Z7K2 595 aaPredicted RBP22.46■■□□□ 1.19
TNFRSF1A-212ENST00000539372 FERMT2Q96AC1 680 aa22.46■■□□□ 1.19
TNFRSF1A-212ENST00000539372 TRERF1Q96PN7 1200 aa22.46■■□□□ 1.19
TNFRSF1A-212ENST00000539372 ZKSCAN3Q9BRR0 538 aa22.46■■□□□ 1.19
TNFRSF1A-212ENST00000539372 GPCPD1Q9NPB8 672 aa22.46■■□□□ 1.19
TNFRSF1A-212ENST00000539372 SMCHD1A6NHR9 2005 aa22.45■■□□□ 1.18
TNFRSF1A-212ENST00000539372 CNTN2Q02246 1040 aa22.45■■□□□ 1.18
TNFRSF1A-212ENST00000539372 ESR2Q92731 530 aa22.45■■□□□ 1.18
TNFRSF1A-212ENST00000539372 IL25Q9H293 177 aa22.45■■□□□ 1.18
TNFRSF1A-212ENST00000539372 A1CFQ9NQ94 594 aaKnown RBP22.45■■□□□ 1.18
TNFRSF1A-212ENST00000539372 CCPG1Q9ULG6 757 aa22.45■■□□□ 1.18
TNFRSF1A-212ENST00000539372 ATP11BQ9Y2G3 1177 aa22.45■■□□□ 1.18
TNFRSF1A-212ENST00000539372 POTEB2H3BUK9 544 aa22.44■■□□□ 1.18
TNFRSF1A-212ENST00000539372 BMP8BP34820 402 aa22.44■■□□□ 1.18
TNFRSF1A-212ENST00000539372 TKFCQ3LXA3 575 aa22.44■■□□□ 1.18
TNFRSF1A-212ENST00000539372 MUM1L1Q5H9M0 696 aa22.44■■□□□ 1.18
TNFRSF1A-212ENST00000539372 SYDE2Q5VT97 1194 aa22.44■■□□□ 1.18
TNFRSF1A-212ENST00000539372 SLC39A5Q6ZMH5 540 aa22.44■■□□□ 1.18
TNFRSF1A-212ENST00000539372 DSCC1Q9BVC3 393 aa22.44■■□□□ 1.18
TNFRSF1A-212ENST00000539372 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.44■■□□□ 1.18
TNFRSF1A-212ENST00000539372 A0A1W2PPC1 479 aa22.43■■□□□ 1.18
TNFRSF1A-212ENST00000539372 PDHBP11177 359 aa22.43■■□□□ 1.18
TNFRSF1A-212ENST00000539372 MDM2Q00987 491 aaPredicted RBP22.43■■□□□ 1.18
TNFRSF1A-212ENST00000539372 ACVR2BQ13705 512 aa22.43■■□□□ 1.18
TNFRSF1A-212ENST00000539372 BTNL9Q6UXG8 535 aa22.43■■□□□ 1.18
TNFRSF1A-212ENST00000539372 ARMCX2Q7L311 632 aa22.43■■□□□ 1.18
TNFRSF1A-212ENST00000539372 RNF180Q86T96 592 aa22.43■■□□□ 1.18
TNFRSF1A-212ENST00000539372 TTC14Q96N46 770 aa22.43■■□□□ 1.18
TNFRSF1A-212ENST00000539372 RANBP17Q9H2T7 1088 aaKnown RBP22.43■■□□□ 1.18
TNFRSF1A-212ENST00000539372 FAM184BQ9ULE4 1060 aa22.43■■□□□ 1.18
TNFRSF1A-212ENST00000539372 KDM4AO75164 1064 aa22.42■■□□□ 1.18
TNFRSF1A-212ENST00000539372 ICAM1P05362 532 aa22.42■■□□□ 1.18
TNFRSF1A-212ENST00000539372 IMMTQ16891 758 aaKnown RBP22.42■■□□□ 1.18
TNFRSF1A-212ENST00000539372 TRIM60Q495X7 471 aa22.42■■□□□ 1.18
TNFRSF1A-212ENST00000539372 CCDC144CPQ8IYA2 1237 aa22.42■■□□□ 1.18
TNFRSF1A-212ENST00000539372 FAM133AQ8N9E0 248 aa22.42■■□□□ 1.18
TNFRSF1A-212ENST00000539372 UBE2OQ9C0C9 1292 aaKnown RBP22.42■■□□□ 1.18
TNFRSF1A-212ENST00000539372 PHF24Q9UPV7 400 aa22.42■■□□□ 1.18
TNFRSF1A-212ENST00000539372 DNAH12Q6ZR08 3092 aa22.42■■□□□ 1.18
TNFRSF1A-212ENST00000539372 LAMA4Q16363 1823 aa22.41■■□□□ 1.18
TNFRSF1A-212ENST00000539372 SYNRGQ9UMZ2 1314 aa22.41■■□□□ 1.18
TNFRSF1A-212ENST00000539372 SOWAHBA6NEL2 793 aa22.41■■□□□ 1.18
TNFRSF1A-212ENST00000539372 B4E1Z4 1266 aa22.41■■□□□ 1.18
TNFRSF1A-212ENST00000539372 SOX1O00570 391 aaPredicted RBP22.41■■□□□ 1.18
TNFRSF1A-212ENST00000539372 CTNNA3Q9UI47 895 aa22.41■■□□□ 1.18
TNFRSF1A-212ENST00000539372 DDX49Q9Y6V7 483 aaKnown RBP22.41■■□□□ 1.18
TNFRSF1A-212ENST00000539372 ADCY6O43306 1168 aa22.4■■□□□ 1.18
TNFRSF1A-212ENST00000539372 ADAMTS4O75173 837 aa22.4■■□□□ 1.18
TNFRSF1A-212ENST00000539372 ZNF543Q08ER8 600 aa22.4■■□□□ 1.18
TNFRSF1A-212ENST00000539372 CCDC144BQ3MJ40 725 aa22.4■■□□□ 1.18
TNFRSF1A-212ENST00000539372 NSMFQ6X4W1 530 aa22.4■■□□□ 1.18
TNFRSF1A-212ENST00000539372 ABHD16BQ9H3Z7 469 aa22.4■■□□□ 1.18
TNFRSF1A-212ENST00000539372 GOLGA8HP0CJ92 632 aa22.39■■□□□ 1.17
TNFRSF1A-212ENST00000539372 SNX17Q15036 470 aa22.39■■□□□ 1.17
TNFRSF1A-212ENST00000539372 IQCA1Q86XH1 822 aa22.39■■□□□ 1.17
TNFRSF1A-212ENST00000539372 DGKHQ86XP1 1220 aa22.39■■□□□ 1.17
TNFRSF1A-212ENST00000539372 PURBQ96QR8 312 aaKnown RBP22.39■■□□□ 1.17
TNFRSF1A-212ENST00000539372 PRDM5Q9NQX1 630 aaPredicted RBP22.39■■□□□ 1.17
TNFRSF1A-212ENST00000539372 CYP39A1Q9NYL5 469 aa22.39■■□□□ 1.17
TNFRSF1A-212ENST00000539372 PRKAG2Q9UGJ0 569 aa22.39■■□□□ 1.17
TNFRSF1A-212ENST00000539372 SZT2Q5T011 3432 aa22.38■■□□□ 1.17
TNFRSF1A-212ENST00000539372 ASTN1O14525 1302 aa22.38■■□□□ 1.17
TNFRSF1A-212ENST00000539372 MCM3APO60318 1980 aa22.38■■□□□ 1.17
TNFRSF1A-212ENST00000539372 A0A1W2PQ45 241 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF1A-212ENST00000539372 A0A1W2PQY0 241 aa22.38■■□□□ 1.17
TNFRSF1A-212ENST00000539372 MYADML2A6NDP7 307 aa22.38■■□□□ 1.17
TNFRSF1A-212ENST00000539372 DUSP11O75319 330 aaKnown RBP22.38■■□□□ 1.17
TNFRSF1A-212ENST00000539372 SNHG28P0DPA3 235 aa22.38■■□□□ 1.17
TNFRSF1A-212ENST00000539372 IRX5P78411 483 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF1A-212ENST00000539372 LRCH3Q96II8 777 aa22.38■■□□□ 1.17
TNFRSF1A-212ENST00000539372 ZSCAN10Q96SZ4 725 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF1A-212ENST00000539372 LBHD1Q9BQE6 289 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF1A-212ENST00000539372 KATNBL1Q9H079 304 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms