RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 SNX14Q9Y5W7 946 aa15.41■□□□□ 0.06
COPS7A-207ENST00000538375 BRCA2P51587 3418 aa15.4■□□□□ 0.06
COPS7A-207ENST00000538375 PGK2P07205 417 aa15.4■□□□□ 0.06
COPS7A-207ENST00000538375 XRCC5P13010 732 aaKnown RBP15.4■□□□□ 0.06
COPS7A-207ENST00000538375 COL9A3Q14050 684 aaPredicted RBP15.4■□□□□ 0.06
COPS7A-207ENST00000538375 MTFR1Q15390 333 aa15.4■□□□□ 0.06
COPS7A-207ENST00000538375 CCL14Q16627 93 aa15.4■□□□□ 0.06
COPS7A-207ENST00000538375 DHX32Q7L7V1 743 aaKnown RBP15.4■□□□□ 0.06
COPS7A-207ENST00000538375 TRMT44Q8IYL2 757 aaKnown RBP15.4■□□□□ 0.06
COPS7A-207ENST00000538375 ANKRD35Q8N283 1001 aa15.4■□□□□ 0.06
COPS7A-207ENST00000538375 STAG2Q8N3U4 1231 aa15.4■□□□□ 0.06
COPS7A-207ENST00000538375 USP6NLQ92738 828 aa15.4■□□□□ 0.06
COPS7A-207ENST00000538375 TCEANC2Q96MN5 208 aa15.4■□□□□ 0.06
COPS7A-207ENST00000538375 TRERF1Q96PN7 1200 aa15.4■□□□□ 0.06
COPS7A-207ENST00000538375 APBA2Q99767 749 aa15.4■□□□□ 0.06
COPS7A-207ENST00000538375 LY9Q9HBG7 655 aa15.4■□□□□ 0.06
COPS7A-207ENST00000538375 CENPFP49454 3210 aa15.39■□□□□ 0.06
COPS7A-207ENST00000538375 POTEFA5A3E0 1075 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 KLRF2D3W0D1 207 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 SH2B2O14492 632 aaPredicted RBP15.39■□□□□ 0.05
COPS7A-207ENST00000538375 COBLO75128 1261 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 HMGCRP04035 888 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 HMGB1P09429 215 aaKnown RBP15.39■□□□□ 0.05
COPS7A-207ENST00000538375 CCL5P13501 91 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 CPA1P15085 419 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 TRIM32Q13049 653 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 SYNE3Q6ZMZ3 975 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 ADGRF4Q8IZF3 695 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 ZNF654Q8IZM8 581 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 ABRAQ8N0Z2 381 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 CHST13Q8NET6 341 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 NPLOC4Q8TAT6 608 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 TRIB2Q92519 343 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 MTA3Q9BTC8 594 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 MYL10Q9BUA6 226 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 RNF208Q9H0X6 261 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 RANBP17Q9H2T7 1088 aaKnown RBP15.39■□□□□ 0.05
COPS7A-207ENST00000538375 RNF146Q9NTX7 359 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 FBXO40Q9UH90 709 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 NAP1L2Q9ULW6 460 aaPredicted RBP15.39■□□□□ 0.05
COPS7A-207ENST00000538375 SLC12A7Q9Y666 1083 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 ZNF536O15090 1300 aa15.39■□□□□ 0.05
COPS7A-207ENST00000538375 COL11A1P12107 1806 aaPredicted RBP15.38■□□□□ 0.05
COPS7A-207ENST00000538375 ICAM1P05362 532 aa15.38■□□□□ 0.05
COPS7A-207ENST00000538375 TAL1P17542 331 aaPredicted RBP15.38■□□□□ 0.05
COPS7A-207ENST00000538375 PSMA5P28066 241 aa15.38■□□□□ 0.05
COPS7A-207ENST00000538375 GRM4Q14833 912 aa15.38■□□□□ 0.05
COPS7A-207ENST00000538375 TKFCQ3LXA3 575 aa15.38■□□□□ 0.05
COPS7A-207ENST00000538375 MFSD14CQ5VZR4 134 aa15.38■□□□□ 0.05
COPS7A-207ENST00000538375 BLOC1S2Q6QNY1 142 aa15.38■□□□□ 0.05
COPS7A-207ENST00000538375 RAB11FIP4Q86YS3 637 aa15.38■□□□□ 0.05
COPS7A-207ENST00000538375 CTCFLQ8NI51 663 aaPredicted RBP15.38■□□□□ 0.05
COPS7A-207ENST00000538375 UNC93B1Q9H1C4 597 aa15.38■□□□□ 0.05
COPS7A-207ENST00000538375 ACAD9Q9H845 621 aa15.38■□□□□ 0.05
COPS7A-207ENST00000538375 PARP14Q460N5 1801 aa15.38■□□□□ 0.05
COPS7A-207ENST00000538375 A0A0G2JMZ2 1700 aa15.37■□□□□ 0.05
COPS7A-207ENST00000538375 PALM3A6NDB9 673 aaPredicted RBP15.37■□□□□ 0.05
COPS7A-207ENST00000538375 EPB41L2O43491 1005 aaKnown RBP15.37■□□□□ 0.05
COPS7A-207ENST00000538375 EIF5BO60841 1220 aaKnown RBP15.37■□□□□ 0.05
COPS7A-207ENST00000538375 LIFRP42702 1097 aa15.37■□□□□ 0.05
COPS7A-207ENST00000538375 EXOSC10Q01780 885 aaKnown RBP15.37■□□□□ 0.05
COPS7A-207ENST00000538375 TROAPQ12815 778 aa15.37■□□□□ 0.05
COPS7A-207ENST00000538375 CDC37Q16543 378 aaPredicted RBP15.37■□□□□ 0.05
COPS7A-207ENST00000538375 USH1GQ495M9 461 aa15.37■□□□□ 0.05
COPS7A-207ENST00000538375 CCDC144CPQ8IYA2 1237 aa15.37■□□□□ 0.05
COPS7A-207ENST00000538375 PIBF1Q8WXW3 757 aa15.37■□□□□ 0.05
COPS7A-207ENST00000538375 KCNB2Q92953 911 aa15.37■□□□□ 0.05
COPS7A-207ENST00000538375 HMX1Q9NP08 348 aaPredicted RBP15.37■□□□□ 0.05
COPS7A-207ENST00000538375 FLRT1Q9NZU1 646 aa15.37■□□□□ 0.05
COPS7A-207ENST00000538375 MAD2L2Q9UI95 211 aa15.37■□□□□ 0.05
COPS7A-207ENST00000538375 GTF3C3Q9Y5Q9 886 aa15.37■□□□□ 0.05
COPS7A-207ENST00000538375 DOCK3Q8IZD9 2030 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 DDAH1O94760 285 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 HOXC6P09630 235 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 CALM1P0DP23 149 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 CALM2P0DP24 149 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 CALM3P0DP25 149 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 PRKAR2AP13861 404 aaKnown RBP15.36■□□□□ 0.05
COPS7A-207ENST00000538375 RXRAP19793 462 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 CASTP20810 708 aaKnown RBP15.36■□□□□ 0.05
COPS7A-207ENST00000538375 CNGA1P29973 690 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 KIF5BP33176 963 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 CYP2C19P33261 490 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 MUM1L1Q5H9M0 696 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 NSMFQ6X4W1 530 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 HOMER1Q86YM7 354 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 JMJD4Q9H9V9 463 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 PNMA2Q9UL42 364 aa15.36■□□□□ 0.05
COPS7A-207ENST00000538375 EN2P19622 333 aaPredicted RBP15.35■□□□□ 0.05
COPS7A-207ENST00000538375 CACNB2Q08289 660 aaPredicted RBP15.35■□□□□ 0.05
COPS7A-207ENST00000538375 Q6ZUG5 572 aa15.35■□□□□ 0.05
COPS7A-207ENST00000538375 MAML3Q96JK9 1138 aa15.35■□□□□ 0.05
COPS7A-207ENST00000538375 DEFB118Q96PH6 123 aa15.35■□□□□ 0.05
COPS7A-207ENST00000538375 RPTORQ8N122 1335 aa15.35■□□□□ 0.05
COPS7A-207ENST00000538375 WDR19Q8NEZ3 1342 aa15.35■□□□□ 0.05
COPS7A-207ENST00000538375 PLXNB2O15031 1838 aa15.34■□□□□ 0.05
COPS7A-207ENST00000538375 PTPDC1A2A3K4 754 aa15.34■□□□□ 0.05
COPS7A-207ENST00000538375 POTEB2H3BUK9 544 aa15.34■□□□□ 0.05
COPS7A-207ENST00000538375 TFRCP02786 760 aaKnown RBP15.34■□□□□ 0.05
COPS7A-207ENST00000538375 RPS6KB1P23443 525 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms