RNA–Protein interactions for RNA: ENST00000537882.2

NDRG1-229, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2 BASIC

Gene NDRG1, Length 2,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-229ENST00000537882 PXDNQ92626 1479 aa12.62□□□□□ -0.39
NDRG1-229ENST00000537882 NID2Q14112 1375 aa12.62□□□□□ -0.39
NDRG1-229ENST00000537882 TRAPPC3O43617 180 aa12.62□□□□□ -0.39
NDRG1-229ENST00000537882 COBLO75128 1261 aa12.62□□□□□ -0.39
NDRG1-229ENST00000537882 IL15P40933 162 aaPredicted RBP12.62□□□□□ -0.39
NDRG1-229ENST00000537882 CASP7P55210 303 aa12.62□□□□□ -0.39
NDRG1-229ENST00000537882 AP1ARQ63HQ0 302 aa12.62□□□□□ -0.39
NDRG1-229ENST00000537882 TTYH3Q9C0H2 523 aa12.62□□□□□ -0.39
NDRG1-229ENST00000537882 ADAMTS13Q76LX8 1427 aa12.62□□□□□ -0.39
NDRG1-229ENST00000537882 PPP1R12BO60237 982 aaPredicted RBP12.61□□□□□ -0.39
NDRG1-229ENST00000537882 ATP6V1G2O95670 118 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 RPSAP08865 295 aaKnown RBP12.61□□□□□ -0.39
NDRG1-229ENST00000537882 PARP1P09874 1014 aaKnown RBP12.61□□□□□ -0.39
NDRG1-229ENST00000537882 PAFAH1B1P43034 410 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 MRPS25P82663 173 aaKnown RBP12.61□□□□□ -0.39
NDRG1-229ENST00000537882 CCDC181Q5TID7 509 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 COPS6Q7L5N1 327 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 IRF2BP1Q8IU81 584 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 TBC1D10CQ8IV04 446 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 RETREG2Q8NC44 543 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 SYMPKQ92797 1274 aaKnown RBP12.61□□□□□ -0.39
NDRG1-229ENST00000537882 KDM4CQ9H3R0 1056 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 LY9Q9HBG7 655 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 TMBIM4Q9HC24 238 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 PPANQ9NQ55 473 aaKnown RBP12.61□□□□□ -0.39
NDRG1-229ENST00000537882 BSDC1Q9NW68 430 aaPredicted RBP12.61□□□□□ -0.39
NDRG1-229ENST00000537882 DENND2AQ9ULE3 1009 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 KCNJ14Q9UNX9 436 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 LEMD3Q9Y2U8 911 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 PDS5AQ29RF7 1337 aaKnown RBP12.61□□□□□ -0.39
NDRG1-229ENST00000537882 MATR3P43243 847 aaKnown RBP eCLIP12.61□□□□□ -0.395e-10■■■■■ 36.5
NDRG1-229ENST00000537882 SLMAPQ14BN4 828 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 LMBR1LQ6UX01 489 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 ANKRD13DQ6ZTN6 518 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 KIRREL3Q8IZU9 778 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 CCDC155Q8N6L0 562 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 NKX2-3Q8TAU0 364 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 WHAMMQ8TF30 809 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 IP6K1Q92551 441 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 CUL5Q93034 780 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 SEC16BQ96JE7 1060 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 NUP58Q9BVL2 599 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 PUS7LQ9H0K6 701 aaKnown RBP12.61□□□□□ -0.39
NDRG1-229ENST00000537882 NOD2Q9HC29 1040 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 HOMER3Q9NSC5 361 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 SLC12A6Q9UHW9 1150 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 CAPN6Q9Y6Q1 641 aa12.61□□□□□ -0.39
NDRG1-229ENST00000537882 GPAA1O43292 621 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 USO1O60763 962 aaKnown RBP12.6□□□□□ -0.39
NDRG1-229ENST00000537882 FAM153BP0C7A2 387 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 GUCY1A2P33402 732 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 LIFRP42702 1097 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 CARSP49589 748 aaKnown RBP12.6□□□□□ -0.39
NDRG1-229ENST00000537882 ELF3P78545 371 aaPredicted RBP12.6□□□□□ -0.39
NDRG1-229ENST00000537882 NR5A1Q13285 461 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 FAM153CQ494X1 144 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 C1orf141Q5JVX7 400 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 NFXL1Q6ZNB6 911 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 CACNA2D3Q8IZS8 1091 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 LMBR1Q8WVP7 490 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 FERMT2Q96AC1 680 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 SH2D4AQ9H788 454 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 ETAA1Q9NY74 926 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 FAM153AQ9UHL3 310 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 NFU1Q9UMS0 254 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 XDHP47989 1333 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 NUTM2BA6NNL0 878 aaPredicted RBP12.6□□□□□ -0.39
NDRG1-229ENST00000537882 NUTM2EB1AL46 878 aaPredicted RBP12.6□□□□□ -0.39
NDRG1-229ENST00000537882 OPLAHO14841 1288 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 IRF6O14896 467 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 EEF1GP26641 437 aaKnown RBP12.6□□□□□ -0.39
NDRG1-229ENST00000537882 ZBED6P86452 979 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 BYSLQ13895 437 aaKnown RBP12.6□□□□□ -0.39
NDRG1-229ENST00000537882 ACCSLQ4AC99 568 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 ZNF658Q5TYW1 1059 aaPredicted RBP12.6□□□□□ -0.39
NDRG1-229ENST00000537882 LRIG3Q6UXM1 1119 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 SPDL1Q96EA4 605 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 VPS54Q9P1Q0 977 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 RIPOR2Q9Y4F9 1068 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 TRIM75PA6NK02 468 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 SKAP2O75563 359 aaPredicted RBP12.6□□□□□ -0.39
NDRG1-229ENST00000537882 GLI1P08151 1106 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 PAEPP09466 180 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 DNM2P50570 870 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 FKBP4Q02790 459 aaKnown RBP eCLIP12.6□□□□□ -0.39
NDRG1-229ENST00000537882 RIPK1Q13546 671 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 CDC37Q16543 378 aaPredicted RBP12.6□□□□□ -0.39
NDRG1-229ENST00000537882 NFRKBQ6P4R8 1299 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 TRIM22Q8IYM9 498 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 CCT6BQ92526 530 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 CCDC47Q96A33 483 aaKnown RBP12.6□□□□□ -0.39
NDRG1-229ENST00000537882 RBM12Q9NTZ6 932 aaKnown RBP12.6□□□□□ -0.39
NDRG1-229ENST00000537882 RNF14Q9UBS8 474 aa12.6□□□□□ -0.39
NDRG1-229ENST00000537882 A0A087WZG4 1122 aa12.59□□□□□ -0.39
NDRG1-229ENST00000537882 GTPBP6O43824 516 aaPredicted RBP12.59□□□□□ -0.39
NDRG1-229ENST00000537882 SRGNP10124 158 aa12.59□□□□□ -0.39
NDRG1-229ENST00000537882 MYL6BP14649 208 aa12.59□□□□□ -0.39
NDRG1-229ENST00000537882 HSPA9P38646 679 aaKnown RBP12.59□□□□□ -0.39
NDRG1-229ENST00000537882 CYP27A1Q02318 531 aa12.59□□□□□ -0.39
NDRG1-229ENST00000537882 SPA17Q15506 151 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms