RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 H0YGN5 161 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 SNHG28P0DPA3 235 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 FDX1P10109 184 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 ALAS1P13196 640 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 MUM1L1Q5H9M0 696 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 ANKRD35Q8N283 1001 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 ANKLE1Q8NAG6 615 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 PNMA1Q8ND90 353 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 CHST13Q8NET6 341 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 MAP4K1Q92918 833 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 FGD4Q96M96 766 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 TRERF1Q96PN7 1200 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 TINF2Q9BSI4 451 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 ESYT1Q9BSJ8 1104 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 RANBP17Q9H2T7 1088 aaKnown RBP16.76■□□□□ 0.27
UBE3B-206ENST00000536398 RNF146Q9NTX7 359 aa16.76■□□□□ 0.27
UBE3B-206ENST00000536398 DIS3Q9Y2L1 958 aaKnown RBP16.76■□□□□ 0.27
UBE3B-206ENST00000536398 TNKSO95271 1327 aa16.75■□□□□ 0.27
UBE3B-206ENST00000536398 CAPN2P17655 700 aa16.75■□□□□ 0.27
UBE3B-206ENST00000536398 BMP2KLQ5H9B9 411 aa16.75■□□□□ 0.27
UBE3B-206ENST00000536398 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.75■□□□□ 0.27
UBE3B-206ENST00000536398 NECAB2Q7Z6G3 386 aa16.75■□□□□ 0.27
UBE3B-206ENST00000536398 UBA5Q9GZZ9 404 aa16.75■□□□□ 0.27
UBE3B-206ENST00000536398 LSG1Q9H089 658 aaKnown RBP16.75■□□□□ 0.27
UBE3B-206ENST00000536398 CNNM2Q9H8M5 875 aa16.75■□□□□ 0.27
UBE3B-206ENST00000536398 RBM8AQ9Y5S9 174 aaKnown RBP16.75■□□□□ 0.27
UBE3B-206ENST00000536398 E7EWF7 191 aa16.74■□□□□ 0.27
UBE3B-206ENST00000536398 SNAI1O95863 264 aaPredicted RBP16.74■□□□□ 0.27
UBE3B-206ENST00000536398 CNTN2Q02246 1040 aa16.74■□□□□ 0.27
UBE3B-206ENST00000536398 SEC23AQ15436 765 aa16.74■□□□□ 0.27
UBE3B-206ENST00000536398 CCDC178Q5BJE1 867 aa16.74■□□□□ 0.27
UBE3B-206ENST00000536398 CHST3Q7LGC8 479 aa16.74■□□□□ 0.27
UBE3B-206ENST00000536398 UBAC1Q9BSL1 405 aa16.74■□□□□ 0.27
UBE3B-206ENST00000536398 HTATIP2Q9BUP3 242 aa16.74■□□□□ 0.27
UBE3B-206ENST00000536398 ACAD9Q9H845 621 aa16.74■□□□□ 0.27
UBE3B-206ENST00000536398 KAT14Q9H8E8 782 aa16.74■□□□□ 0.27
UBE3B-206ENST00000536398 SENP2Q9HC62 589 aa16.74■□□□□ 0.27
UBE3B-206ENST00000536398 A1CFQ9NQ94 594 aaKnown RBP16.74■□□□□ 0.27
UBE3B-206ENST00000536398 FBXO40Q9UH90 709 aa16.74■□□□□ 0.27
UBE3B-206ENST00000536398 CCPG1Q9ULG6 757 aa16.74■□□□□ 0.27
UBE3B-206ENST00000536398 DDX49Q9Y6V7 483 aaKnown RBP16.74■□□□□ 0.27
UBE3B-206ENST00000536398 PFASO15067 1338 aa16.73■□□□□ 0.27
UBE3B-206ENST00000536398 SEPT4O43236 478 aa16.73■□□□□ 0.27
UBE3B-206ENST00000536398 ICAM1P05362 532 aa16.73■□□□□ 0.27
UBE3B-206ENST00000536398 ZNF865P0CJ78 1059 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-206ENST00000536398 NT5C2P49902 561 aa16.73■□□□□ 0.27
UBE3B-206ENST00000536398 COL9A3Q14050 684 aaPredicted RBP16.73■□□□□ 0.27
UBE3B-206ENST00000536398 PURBQ96QR8 312 aaKnown RBP16.73■□□□□ 0.27
UBE3B-206ENST00000536398 C11orf49Q9H6J7 331 aa16.73■□□□□ 0.27
UBE3B-206ENST00000536398 SOWAHBA6NEL2 793 aa16.72■□□□□ 0.27
UBE3B-206ENST00000536398 COL6A1P12109 1028 aa16.72■□□□□ 0.27
UBE3B-206ENST00000536398 TKFCQ3LXA3 575 aa16.72■□□□□ 0.27
UBE3B-206ENST00000536398 GJC2Q5T442 439 aaPredicted RBP16.72■□□□□ 0.27
UBE3B-206ENST00000536398 IFIT1BQ5T764 474 aaKnown RBP16.72■□□□□ 0.27
UBE3B-206ENST00000536398 KIAA1211Q6ZU35 1233 aa16.72■□□□□ 0.27
UBE3B-206ENST00000536398 LENG1Q96BZ8 264 aaPredicted RBP16.72■□□□□ 0.27
UBE3B-206ENST00000536398 PCDH10Q9P2E7 1040 aa16.72■□□□□ 0.27
UBE3B-206ENST00000536398 SMCHD1A6NHR9 2005 aa16.72■□□□□ 0.27
UBE3B-206ENST00000536398 ANTXR2P58335 489 aa16.71■□□□□ 0.27
UBE3B-206ENST00000536398 TRDNQ13061 729 aa16.71■□□□□ 0.27
UBE3B-206ENST00000536398 MAMDC4Q6UXC1 1216 aa16.71■□□□□ 0.27
UBE3B-206ENST00000536398 FAM133AQ8N9E0 248 aa16.71■□□□□ 0.27
UBE3B-206ENST00000536398 CLEC4DQ8WXI8 215 aa16.71■□□□□ 0.27
UBE3B-206ENST00000536398 PLXNA1Q9UIW2 1896 aa16.71■□□□□ 0.27
UBE3B-206ENST00000536398 ASTN1O14525 1302 aa16.7■□□□□ 0.26
UBE3B-206ENST00000536398 POTEB2H3BUK9 544 aa16.7■□□□□ 0.26
UBE3B-206ENST00000536398 NFIBO00712 420 aa16.7■□□□□ 0.26
UBE3B-206ENST00000536398 IFIT3O14879 490 aaKnown RBP16.7■□□□□ 0.26
UBE3B-206ENST00000536398 EVI5O60447 810 aa16.7■□□□□ 0.26
UBE3B-206ENST00000536398 MSCO60682 206 aa16.7■□□□□ 0.26
UBE3B-206ENST00000536398 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
UBE3B-206ENST00000536398 GPATCH4Q5T3I0 446 aaKnown RBP16.7■□□□□ 0.26
UBE3B-206ENST00000536398 NSMFQ6X4W1 530 aa16.7■□□□□ 0.26
UBE3B-206ENST00000536398 ZNF467Q7Z7K2 595 aaPredicted RBP16.7■□□□□ 0.26
UBE3B-206ENST00000536398 MB21D2Q8IYB1 491 aaPredicted RBP16.7■□□□□ 0.26
UBE3B-206ENST00000536398 ADGRF4Q8IZF3 695 aa16.7■□□□□ 0.26
UBE3B-206ENST00000536398 STAG2Q8N3U4 1231 aa16.7■□□□□ 0.26
UBE3B-206ENST00000536398 MSL3Q8N5Y2 521 aaKnown RBP16.7■□□□□ 0.26
UBE3B-206ENST00000536398 NCOA7Q8NI08 942 aa16.7■□□□□ 0.26
UBE3B-206ENST00000536398 SENP6Q9GZR1 1112 aaPredicted RBP16.7■□□□□ 0.26
UBE3B-206ENST00000536398 VAT1LQ9HCJ6 419 aa16.7■□□□□ 0.26
UBE3B-206ENST00000536398 ANO2Q9NQ90 1003 aa16.7■□□□□ 0.26
UBE3B-206ENST00000536398 GPHNQ9NQX3 736 aaPredicted RBP16.7■□□□□ 0.26
UBE3B-206ENST00000536398 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.7■□□□□ 0.26
UBE3B-206ENST00000536398 CYP39A1Q9NYL5 469 aa16.7■□□□□ 0.26
UBE3B-206ENST00000536398 SYNGAP1Q96PV0 1343 aa16.7■□□□□ 0.26
UBE3B-206ENST00000536398 SLC27A2O14975 620 aa16.69■□□□□ 0.26
UBE3B-206ENST00000536398 PGK1P00558 417 aa16.69■□□□□ 0.26
UBE3B-206ENST00000536398 NEFLP07196 543 aa16.69■□□□□ 0.26
UBE3B-206ENST00000536398 PARP1P09874 1014 aaKnown RBP16.69■□□□□ 0.26
UBE3B-206ENST00000536398 BAATQ14032 418 aaPredicted RBP16.69■□□□□ 0.26
UBE3B-206ENST00000536398 LRRC26Q2I0M4 334 aa16.69■□□□□ 0.26
UBE3B-206ENST00000536398 ARMCX2Q7L311 632 aa16.69■□□□□ 0.26
UBE3B-206ENST00000536398 RALYLQ86SE5 291 aaKnown RBP16.69■□□□□ 0.26
UBE3B-206ENST00000536398 CCDC144CPQ8IYA2 1237 aa16.69■□□□□ 0.26
UBE3B-206ENST00000536398 NRBP1Q9UHY1 535 aa16.69■□□□□ 0.26
UBE3B-206ENST00000536398 ZHX1Q9UKY1 873 aaPredicted RBP16.69■□□□□ 0.26
UBE3B-206ENST00000536398 CNPY2Q9Y2B0 182 aa16.69■□□□□ 0.26
UBE3B-206ENST00000536398 ADCY6O43306 1168 aa16.68■□□□□ 0.26
UBE3B-206ENST00000536398 ACVR2BQ13705 512 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms