RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ICAM1P05362 532 aa23.93■■□□□ 1.42
CCS-208ENST00000533244 GOLGA8HP0CJ92 632 aa23.93■■□□□ 1.42
CCS-208ENST00000533244 PRKAR2AP13861 404 aaKnown RBP23.93■■□□□ 1.42
CCS-208ENST00000533244 EN2P19622 333 aaPredicted RBP23.93■■□□□ 1.42
CCS-208ENST00000533244 SNAP25P60880 206 aa23.93■■□□□ 1.42
CCS-208ENST00000533244 WTAPQ15007 396 aa23.93■■□□□ 1.42
CCS-208ENST00000533244 TKFCQ3LXA3 575 aa23.93■■□□□ 1.42
CCS-208ENST00000533244 KCNB2Q92953 911 aa23.93■■□□□ 1.42
CCS-208ENST00000533244 SLC5A4Q9NY91 659 aa23.93■■□□□ 1.42
CCS-208ENST00000533244 DIS3Q9Y2L1 958 aaKnown RBP23.93■■□□□ 1.42
CCS-208ENST00000533244 PLXNA1Q9UIW2 1896 aa23.92■■□□□ 1.42
CCS-208ENST00000533244 DNAJC25-GNG10A0A024R161 153 aa23.92■■□□□ 1.42
CCS-208ENST00000533244 MCM5P33992 734 aa23.92■■□□□ 1.42
CCS-208ENST00000533244 GJA8P48165 433 aa23.92■■□□□ 1.42
CCS-208ENST00000533244 CACNB2Q08289 660 aaPredicted RBP23.92■■□□□ 1.42
CCS-208ENST00000533244 ZNF792Q3KQV3 632 aa23.92■■□□□ 1.42
CCS-208ENST00000533244 TMEM67Q5HYA8 995 aa23.92■■□□□ 1.42
CCS-208ENST00000533244 CCDC174Q6PII3 467 aa23.92■■□□□ 1.42
CCS-208ENST00000533244 RASEFQ8IZ41 740 aa23.92■■□□□ 1.42
CCS-208ENST00000533244 SHISA4Q96DD7 197 aa23.92■■□□□ 1.42
CCS-208ENST00000533244 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.92■■□□□ 1.42
CCS-208ENST00000533244 PRC1O43663 620 aa23.91■■□□□ 1.42
CCS-208ENST00000533244 PARP1P09874 1014 aaKnown RBP23.91■■□□□ 1.42
CCS-208ENST00000533244 MAML3Q96JK9 1138 aa23.91■■□□□ 1.42
CCS-208ENST00000533244 ACAD9Q9H845 621 aa23.91■■□□□ 1.42
CCS-208ENST00000533244 LY9Q9HBG7 655 aa23.91■■□□□ 1.42
CCS-208ENST00000533244 HMX1Q9NP08 348 aaPredicted RBP23.91■■□□□ 1.42
CCS-208ENST00000533244 EPB41L2O43491 1005 aaKnown RBP23.9■■□□□ 1.42
CCS-208ENST00000533244 REC8O95072 547 aa23.9■■□□□ 1.42
CCS-208ENST00000533244 PGK2P07205 417 aa23.9■■□□□ 1.42
CCS-208ENST00000533244 SLC4A3P48751 1232 aa23.9■■□□□ 1.42
CCS-208ENST00000533244 TROAPQ12815 778 aa23.9■■□□□ 1.42
CCS-208ENST00000533244 MFSD14CQ5VZR4 134 aa23.9■■□□□ 1.42
CCS-208ENST00000533244 TMEM87BQ96K49 555 aa23.9■■□□□ 1.42
CCS-208ENST00000533244 UBA5Q9GZZ9 404 aa23.9■■□□□ 1.42
CCS-208ENST00000533244 CPVLQ9H3G5 476 aa23.9■■□□□ 1.42
CCS-208ENST00000533244 RNF146Q9NTX7 359 aa23.9■■□□□ 1.42
CCS-208ENST00000533244 CCPG1Q9ULG6 757 aa23.9■■□□□ 1.42
CCS-208ENST00000533244 WDR19Q8NEZ3 1342 aa23.89■■□□□ 1.42
CCS-208ENST00000533244 SMCHD1A6NHR9 2005 aa23.89■■□□□ 1.42
CCS-208ENST00000533244 SH2B2O14492 632 aaPredicted RBP23.89■■□□□ 1.41
CCS-208ENST00000533244 HSPA4P34932 840 aa23.89■■□□□ 1.41
CCS-208ENST00000533244 U2AF1L4Q8WU68 220 aaKnown RBP23.89■■□□□ 1.41
CCS-208ENST00000533244 GPHNQ9NQX3 736 aaPredicted RBP23.89■■□□□ 1.41
CCS-208ENST00000533244 HOMER2Q9NSB8 354 aa23.89■■□□□ 1.41
CCS-208ENST00000533244 MAD2L2Q9UI95 211 aa23.89■■□□□ 1.41
CCS-208ENST00000533244 PALM3A6NDB9 673 aaPredicted RBP23.88■■□□□ 1.41
CCS-208ENST00000533244 SGPL1O95470 568 aa23.88■■□□□ 1.41
CCS-208ENST00000533244 ALAS1P13196 640 aa23.88■■□□□ 1.41
CCS-208ENST00000533244 CAPN2P17655 700 aa23.88■■□□□ 1.41
CCS-208ENST00000533244 CYP2C19P33261 490 aa23.88■■□□□ 1.41
CCS-208ENST00000533244 GRM4Q14833 912 aa23.88■■□□□ 1.41
CCS-208ENST00000533244 STAG2Q8N3U4 1231 aa23.88■■□□□ 1.41
CCS-208ENST00000533244 TRERF1Q96PN7 1200 aa23.88■■□□□ 1.41
CCS-208ENST00000533244 NEK1Q96PY6 1258 aa23.88■■□□□ 1.41
CCS-208ENST00000533244 CRISPLD2Q9H0B8 497 aa23.88■■□□□ 1.41
CCS-208ENST00000533244 PNMA2Q9UL42 364 aa23.88■■□□□ 1.41
CCS-208ENST00000533244 LIFRP42702 1097 aa23.87■■□□□ 1.41
CCS-208ENST00000533244 MLLT1Q03111 559 aaPredicted RBP23.87■■□□□ 1.41
CCS-208ENST00000533244 KRT32Q14532 448 aa23.87■■□□□ 1.41
CCS-208ENST00000533244 ADCK5Q3MIX3 580 aa23.87■■□□□ 1.41
CCS-208ENST00000533244 ADGRF4Q8IZF3 695 aa23.87■■□□□ 1.41
CCS-208ENST00000533244 DDX11Q96FC9 970 aa23.87■■□□□ 1.41
CCS-208ENST00000533244 DEFB118Q96PH6 123 aa23.87■■□□□ 1.41
CCS-208ENST00000533244 A1CFQ9NQ94 594 aaKnown RBP23.87■■□□□ 1.41
CCS-208ENST00000533244 CYBAP13498 195 aa23.86■■□□□ 1.41
CCS-208ENST00000533244 TAL1P17542 331 aaPredicted RBP23.86■■□□□ 1.41
CCS-208ENST00000533244 CCND3P30281 292 aaPredicted RBP23.86■■□□□ 1.41
CCS-208ENST00000533244 MUM1L1Q5H9M0 696 aa23.86■■□□□ 1.41
CCS-208ENST00000533244 ANKRD35Q8N283 1001 aa23.86■■□□□ 1.41
CCS-208ENST00000533244 FGD4Q96M96 766 aa23.86■■□□□ 1.41
CCS-208ENST00000533244 MAP3K14Q99558 947 aa23.86■■□□□ 1.41
CCS-208ENST00000533244 MKI67P46013 3256 aaKnown RBP23.86■■□□□ 1.41
CCS-208ENST00000533244 KLRF2D3W0D1 207 aa23.85■■□□□ 1.41
CCS-208ENST00000533244 EXOSC10Q01780 885 aaKnown RBP23.85■■□□□ 1.41
CCS-208ENST00000533244 CATIPQ7Z7H3 387 aa23.85■■□□□ 1.41
CCS-208ENST00000533244 ZNF467Q7Z7K2 595 aaPredicted RBP23.85■■□□□ 1.41
CCS-208ENST00000533244 TMTC2Q8N394 836 aa23.85■■□□□ 1.41
CCS-208ENST00000533244 MSL3Q8N5Y2 521 aaKnown RBP23.85■■□□□ 1.41
CCS-208ENST00000533244 TRPV1Q8NER1 839 aa23.85■■□□□ 1.41
CCS-208ENST00000533244 JMJD4Q9H9V9 463 aa23.85■■□□□ 1.41
CCS-208ENST00000533244 DDAH1O94760 285 aa23.84■■□□□ 1.41
CCS-208ENST00000533244 CDC37Q16543 378 aaPredicted RBP23.84■■□□□ 1.41
CCS-208ENST00000533244 SLC35G1Q2M3R5 365 aa23.84■■□□□ 1.41
CCS-208ENST00000533244 UBE2Q1Q7Z7E8 422 aa23.84■■□□□ 1.41
CCS-208ENST00000533244 ZNF654Q8IZM8 581 aa23.84■■□□□ 1.41
CCS-208ENST00000533244 FAM133AQ8N9E0 248 aa23.84■■□□□ 1.41
CCS-208ENST00000533244 MTMR8Q96EF0 704 aa23.84■■□□□ 1.41
CCS-208ENST00000533244 TINF2Q9BSI4 451 aa23.84■■□□□ 1.41
CCS-208ENST00000533244 SNX14Q9Y5W7 946 aa23.84■■□□□ 1.41
CCS-208ENST00000533244 TNRC18O15417 2968 aaPredicted RBP23.84■■□□□ 1.41
CCS-208ENST00000533244 PFASO15067 1338 aa23.84■■□□□ 1.41
CCS-208ENST00000533244 MAMDC4Q6UXC1 1216 aa23.84■■□□□ 1.41
CCS-208ENST00000533244 DHX32Q7L7V1 743 aaKnown RBP23.84■■□□□ 1.41
CCS-208ENST00000533244 SGMS1Q86VZ5 419 aa23.84■■□□□ 1.41
CCS-208ENST00000533244 CLEC4DQ8WXI8 215 aa23.84■■□□□ 1.41
CCS-208ENST00000533244 CYP39A1Q9NYL5 469 aa23.84■■□□□ 1.41
CCS-208ENST00000533244 NRBP1Q9UHY1 535 aa23.84■■□□□ 1.41
CCS-208ENST00000533244 LCTP09848 1927 aa23.83■■□□□ 1.41
CCS-208ENST00000533244 FRMPD3Q5JV73 1810 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms