RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 CCDC12Q8WUD4 166 aaPredicted RBP6.54□□□□□ -1.36
RDX-213ENST00000532461 ABHD10Q9NUJ1 306 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 MCM9Q9NXL9 1143 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 TSPY2A6NKD2 308 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 LGALS16A8MUM7 142 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 GNPATO15228 680 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 EDIL3O43854 480 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 NPM3O75607 178 aaKnown RBP6.54□□□□□ -1.36
RDX-213ENST00000532461 KIF20AO95235 890 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 LCA5LO95447 670 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 ARHGAP25P42331 645 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 COPB1P53618 953 aaKnown RBP6.54□□□□□ -1.36
RDX-213ENST00000532461 FKBP1AP62942 108 aaKnown RBP6.54□□□□□ -1.36
RDX-213ENST00000532461 PDIA5Q14554 519 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 ELF2Q15723 593 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 ZNF827Q17R98 1081 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 FAM47AQ5JRC9 791 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 HYIQ5T013 277 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 PRR5LQ6MZQ0 368 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 SLF2Q8IX21 1173 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 STAG2Q8N3U4 1231 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 LRRN4CLQ8ND94 238 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 WDR24Q96S15 920 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 MRPL44Q9H9J2 332 aaKnown RBP6.54□□□□□ -1.36
RDX-213ENST00000532461 CD209Q9NNX6 404 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 TOMM22Q9NS69 142 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 CCNL1Q9UK58 526 aaPredicted RBP6.54□□□□□ -1.36
RDX-213ENST00000532461 CAPN11Q9UMQ6 739 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 GPSM2P81274 684 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 GRIK5Q16478 980 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 JAKMIP3Q5VZ66 844 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 ZNF572Q7Z3I7 529 aaPredicted RBP6.54□□□□□ -1.36
RDX-213ENST00000532461 DZIP1Q86YF9 867 aaKnown RBP6.54□□□□□ -1.36
RDX-213ENST00000532461 ZC3H3Q8IXZ2 948 aaKnown RBP6.54□□□□□ -1.36
RDX-213ENST00000532461 TRMT44Q8IYL2 757 aaKnown RBP6.54□□□□□ -1.36
RDX-213ENST00000532461 FBXW7Q969H0 707 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 PURBQ96QR8 312 aaKnown RBP6.54□□□□□ -1.36
RDX-213ENST00000532461 TFCP2L1Q9NZI6 479 aa6.54□□□□□ -1.36
RDX-213ENST00000532461 BAZ2BQ9UIF8 2168 aaKnown RBP6.54□□□□□ -1.36
RDX-213ENST00000532461 SCN9AQ15858 1988 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 PRCPP42785 496 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 AMPD2Q01433 879 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 FILIP1LQ4L180 1135 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 TRAPPC3LQ5T215 181 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 PPP4R3AQ6IN85 833 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 DTHD1Q6ZMT9 781 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 KRT222Q8N1A0 295 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 MBOAT7Q96N66 472 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 MMTAG2Q9BU76 263 aaKnown RBP6.53□□□□□ -1.36
RDX-213ENST00000532461 EHD4Q9H223 541 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 KCNJ18B7U540 433 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 PSMD14O00487 310 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 SRGNP10124 158 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 GYS1P13807 737 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 CASQ1P31415 396 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 TXLNAP40222 546 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 CDK8P49336 464 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 FXR1P51114 621 aaKnown RBP eCLIP6.53□□□□□ -1.36
RDX-213ENST00000532461 CLCN6P51797 869 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 ADKP55263 362 aaKnown RBP6.53□□□□□ -1.36
RDX-213ENST00000532461 ERVK-24P63145 666 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 KCNJ12Q14500 433 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 BMS1Q14692 1282 aaKnown RBP6.53□□□□□ -1.36
RDX-213ENST00000532461 CYP26C1Q6V0L0 522 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 CCDC82Q8N4S0 544 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 NELFBQ8WX92 580 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 ERGIC2Q96RQ1 377 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 DUSP9Q99956 384 aaKnown RBP6.53□□□□□ -1.36
RDX-213ENST00000532461 TMEM60Q9H2L4 133 aa6.53□□□□□ -1.36
RDX-213ENST00000532461 PVALEFA0A1B0GWK0 134 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 RASSF10A6NK89 507 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 TUBBP07437 444 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 CDK11BP21127 795 aaKnown RBP6.52□□□□□ -1.36
RDX-213ENST00000532461 GNA11P29992 359 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 ERCC6LQ2NKX8 1250 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 TMEM119Q4V9L6 283 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 ASPRV1Q53RT3 343 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 SP8Q8IXZ3 490 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 AMOTL1Q8IY63 956 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 MB21D1Q8N884 522 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 RBM17Q96I25 401 aaKnown RBP6.52□□□□□ -1.36
RDX-213ENST00000532461 NUP58Q9BVL2 599 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 STK17AQ9UEE5 414 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 SWAP70Q9UH65 585 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 SYNPO2Q9UMS6 1093 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 CTNND2Q9UQB3 1225 aa6.52□□□□□ -1.36
RDX-213ENST00000532461 ATP8B3O60423 1300 aa6.52□□□□□ -1.37
RDX-213ENST00000532461 MAP2K7O14733 419 aa6.52□□□□□ -1.37
RDX-213ENST00000532461 TSPY3P0CV98 308 aa6.52□□□□□ -1.37
RDX-213ENST00000532461 TSPY8P0CW00 308 aa6.52□□□□□ -1.37
RDX-213ENST00000532461 AFMP43652 599 aa6.52□□□□□ -1.37
RDX-213ENST00000532461 SEPT2Q15019 361 aa6.52□□□□□ -1.37
RDX-213ENST00000532461 CENPPQ6IPU0 288 aa6.52□□□□□ -1.37
RDX-213ENST00000532461 PPFIBP1Q86W92 1011 aa6.52□□□□□ -1.37
RDX-213ENST00000532461 PDILTQ8N807 584 aa6.52□□□□□ -1.37
RDX-213ENST00000532461 CNBD1Q8NA66 436 aa6.52□□□□□ -1.37
RDX-213ENST00000532461 CRYGNQ8WXF5 182 aa6.52□□□□□ -1.37
RDX-213ENST00000532461 ZNF592Q92610 1267 aa6.52□□□□□ -1.37
RDX-213ENST00000532461 TRIM9Q9C026 710 aa6.52□□□□□ -1.37
RDX-213ENST00000532461 ZMYND15Q9H091 742 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms