RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	SOS1	Q07889	1333 aa	Predicted RBP	7.77	□□□□□ -1.17
PUM1-222	ENST00000531867	ARFGEF2	Q9Y6D5	1785 aa		7.76	□□□□□ -1.17
PUM1-222	ENST00000531867	CARMIL3	Q8ND23	1372 aa		7.76	□□□□□ -1.17
PUM1-222	ENST00000531867	P4HB	P07237	508 aa	Known RBP	7.76	□□□□□ -1.17
PUM1-222	ENST00000531867	HSP90AB1	P08238	724 aa	Known RBP	7.76	□□□□□ -1.17
PUM1-222	ENST00000531867	AKAP4	Q5JQC9	854 aa		7.76	□□□□□ -1.17
PUM1-222	ENST00000531867	CARD11	Q9BXL7	1154 aa		7.76	□□□□□ -1.17
PUM1-222	ENST00000531867	TAOK3	Q9H2K8	898 aa		7.76	□□□□□ -1.17
PUM1-222	ENST00000531867	ZFP64	Q9NPA5	681 aa		7.76	□□□□□ -1.17
PUM1-222	ENST00000531867	KRT82	Q9NSB4	513 aa		7.76	□□□□□ -1.17
PUM1-222	ENST00000531867	NARF	Q9UHQ1	456 aa		7.76	□□□□□ -1.17
PUM1-222	ENST00000531867	SLX4	Q8IY92	1834 aa		7.75	□□□□□ -1.17
PUM1-222	ENST00000531867	COL11A2	P13942	1736 aa	Predicted RBP	7.75	□□□□□ -1.17
PUM1-222	ENST00000531867	CASP8AP2	Q9UKL3	1982 aa		7.75	□□□□□ -1.17
PUM1-222	ENST00000531867	LDHB	P07195	334 aa	Known RBP	7.75	□□□□□ -1.17
PUM1-222	ENST00000531867	GSTP1	P09211	210 aa	Known RBP	7.75	□□□□□ -1.17
PUM1-222	ENST00000531867	DRD2	P14416	443 aa		7.75	□□□□□ -1.17
PUM1-222	ENST00000531867	CANX	P27824	592 aa	Known RBP	7.75	□□□□□ -1.17
PUM1-222	ENST00000531867	ZNF157	P51786	506 aa	Predicted RBP	7.75	□□□□□ -1.17
PUM1-222	ENST00000531867	PAOX	Q6QHF9	649 aa		7.75	□□□□□ -1.17
PUM1-222	ENST00000531867	FAM177A1	Q8N128	213 aa	Predicted RBP	7.75	□□□□□ -1.17
PUM1-222	ENST00000531867	CNTROB	Q8N137	903 aa		7.75	□□□□□ -1.17
PUM1-222	ENST00000531867	C3orf58	Q8NDZ4	430 aa		7.75	□□□□□ -1.17
PUM1-222	ENST00000531867	CEP44	Q9C0F1	390 aa		7.75	□□□□□ -1.17
PUM1-222	ENST00000531867	AP4E1	Q9UPM8	1137 aa		7.75	□□□□□ -1.17
PUM1-222	ENST00000531867	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	FAM95C	A0A1B0GW59	222 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	AOC2	O75106	756 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	ECEL1	O95672	775 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	MAP2K2	P36507	400 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	GRIK1	P39086	918 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	ECE1	P42892	770 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	PNMA8A	Q86V59	439 aa	Predicted RBP	7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	ZDHHC13	Q8IUH4	622 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	SULF2	Q8IWU5	870 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	EZH1	Q92800	747 aa	Predicted RBP	7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	CAPNS2	Q96L46	248 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	GPR101	Q96P66	508 aa	Predicted RBP	7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	WDR18	Q9BV38	432 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	BRIP1	Q9BX63	1249 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	EMILIN2	Q9BXX0	1053 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	C12orf49	Q9H741	205 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	DDX21	Q9NR30	783 aa	Known RBP eCLIP	7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	FAM8A1	Q9UBU6	413 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	HACL1	Q9UJ83	578 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	SAMM50	Q9Y512	469 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	ACTL7B	Q9Y614	415 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	TRPM7	Q96QT4	1865 aa		7.74	□□□□□ -1.17
PUM1-222	ENST00000531867	CA12	O43570	354 aa		7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	PRPF40A	O75400	957 aa	Known RBP	7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	SLFN14	P0C7P3	912 aa		7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	CYP19A1	P11511	503 aa	Predicted RBP	7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	NME2	P22392	152 aa		7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	EPHX2	P34913	555 aa		7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	PDE6B	P35913	854 aa		7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	MAP7	Q14244	749 aa		7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	CPSF6	Q16630	551 aa	Known RBP eCLIP	7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	XP32	Q5T750	250 aa		7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	MAP1S	Q66K74	1059 aa	Predicted RBP	7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	DYM	Q7RTS9	669 aa		7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	FBLIM1	Q8WUP2	373 aa		7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	SIN3A	Q96ST3	1273 aa		7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	GSX1	Q9H4S2	264 aa	Predicted RBP	7.73	□□□□□ -1.17
PUM1-222	ENST00000531867	CACNA1S	Q13698	1873 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	COL15A1	P39059	1388 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	SCN11A	Q9UI33	1791 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	RBM47	A0AV96	593 aa	Known RBP	7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	ANKRD33B	A6NCL7	494 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	FZD9	O00144	591 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	NFKBIB	Q15653	356 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	KIF4B	Q2VIQ3	1234 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	EAPP	Q56P03	285 aa	Predicted RBP	7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	SOGA3	Q5TF21	947 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	CST9	Q5W186	159 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	STYK1	Q6J9G0	422 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	CDPF1	Q6NVV7	123 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	DNAJC10	Q8IXB1	793 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	ZNF622	Q969S3	477 aa	Known RBP eCLIP	7.72	□□□□□ -1.17	9e-10	■■■□□ 14.6
PUM1-222	ENST00000531867	SETDB2	Q96T68	719 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	CHMP4A	Q9BY43	222 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	OSBPL7	Q9BZF2	842 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	CCDC86	Q9H6F5	360 aa	Known RBP	7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	ABT1	Q9ULW3	272 aa	Known RBP	7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	ZNF541	Q9H0D2	1346 aa		7.72	□□□□□ -1.17
PUM1-222	ENST00000531867	ST20-MTHFS	A0A0A6YYL1	179 aa		7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	COBL	O75128	1261 aa		7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	RAB6A	P20340	208 aa		7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	ARNT	P27540	789 aa		7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	GNA15	P30679	374 aa		7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	EIF4A2	Q14240	407 aa	Known RBP	7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	AMOT	Q4VCS5	1084 aa		7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	PLEKHO1	Q53GL0	409 aa	Predicted RBP	7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	CYP4F22	Q6NT55	531 aa		7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	PDZD3	Q86UT5	571 aa		7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	SHKBP1	Q8TBC3	707 aa		7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	HHIPL1	Q96JK4	782 aa		7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	NECAB3	Q96P71	396 aa	Predicted RBP	7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	METTL22	Q9BUU2	404 aa	Predicted RBP	7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	ATXN3L	Q9H3M9	355 aa		7.71	□□□□□ -1.18
PUM1-222	ENST00000531867	POLK	Q9UBT6	870 aa		7.71	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms