RNA–Protein interactions for RNA: ENST00000531046.1

LINC01016-204, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 1 (best)

Gene LINC01016, Length 822 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-204ENST00000531046 ZNF536O15090 1300 aa15.2■□□□□ 0.02
LINC01016-204ENST00000531046 SLC27A2O14975 620 aa15.2■□□□□ 0.02
LINC01016-204ENST00000531046 SNHG28P0DPA3 235 aa15.2■□□□□ 0.02
LINC01016-204ENST00000531046 OAZ1P54368 228 aa15.2■□□□□ 0.02
LINC01016-204ENST00000531046 SEC23AQ15436 765 aa15.2■□□□□ 0.02
LINC01016-204ENST00000531046 BTNL9Q6UXG8 535 aa15.2■□□□□ 0.02
LINC01016-204ENST00000531046 NCOA7Q8NI08 942 aa15.2■□□□□ 0.02
LINC01016-204ENST00000531046 DDX11Q96FC9 970 aa15.2■□□□□ 0.02
LINC01016-204ENST00000531046 UBA5Q9GZZ9 404 aa15.2■□□□□ 0.02
LINC01016-204ENST00000531046 CPVLQ9H3G5 476 aa15.2■□□□□ 0.02
LINC01016-204ENST00000531046 SLC5A4Q9NY91 659 aa15.2■□□□□ 0.02
LINC01016-204ENST00000531046 IFIT3O14879 490 aaKnown RBP15.19■□□□□ 0.02
LINC01016-204ENST00000531046 ALAS1P13196 640 aa15.19■□□□□ 0.02
LINC01016-204ENST00000531046 CNGA1P29973 690 aa15.19■□□□□ 0.02
LINC01016-204ENST00000531046 ZNF792Q3KQV3 632 aa15.19■□□□□ 0.02
LINC01016-204ENST00000531046 OLFML2BQ68BL8 750 aa15.19■□□□□ 0.02
LINC01016-204ENST00000531046 CREB3L3Q68CJ9 461 aa15.19■□□□□ 0.02
LINC01016-204ENST00000531046 MAML3Q96JK9 1138 aa15.19■□□□□ 0.02
LINC01016-204ENST00000531046 SENP2Q9HC62 589 aa15.19■□□□□ 0.02
LINC01016-204ENST00000531046 RNF146Q9NTX7 359 aa15.19■□□□□ 0.02
LINC01016-204ENST00000531046 SMCHD1A6NHR9 2005 aa15.19■□□□□ 0.02
LINC01016-204ENST00000531046 COL9A3Q14050 684 aaPredicted RBP15.18■□□□□ 0.02
LINC01016-204ENST00000531046 NECTIN1Q15223 517 aa15.18■□□□□ 0.02
LINC01016-204ENST00000531046 MUM1L1Q5H9M0 696 aa15.18■□□□□ 0.02
LINC01016-204ENST00000531046 PRAMEF19Q5SWL8 479 aa15.18■□□□□ 0.02
LINC01016-204ENST00000531046 GPATCH4Q5T3I0 446 aaKnown RBP15.18■□□□□ 0.02
LINC01016-204ENST00000531046 MB21D2Q8IYB1 491 aaPredicted RBP15.18■□□□□ 0.02
LINC01016-204ENST00000531046 ANKRD35Q8N283 1001 aa15.18■□□□□ 0.02
LINC01016-204ENST00000531046 TRPV1Q8NER1 839 aa15.18■□□□□ 0.02
LINC01016-204ENST00000531046 CHST13Q8NET6 341 aa15.18■□□□□ 0.02
LINC01016-204ENST00000531046 CRISPLD2Q9H0B8 497 aa15.18■□□□□ 0.02
LINC01016-204ENST00000531046 RANBP17Q9H2T7 1088 aaKnown RBP15.18■□□□□ 0.02
LINC01016-204ENST00000531046 FBXO40Q9UH90 709 aa15.18■□□□□ 0.02
LINC01016-204ENST00000531046 CCPG1Q9ULG6 757 aa15.18■□□□□ 0.02
LINC01016-204ENST00000531046 PLXNA1Q9UIW2 1896 aa15.17■□□□□ 0.02
LINC01016-204ENST00000531046 ERICH2A1L162 156 aa15.17■□□□□ 0.02
LINC01016-204ENST00000531046 IGHA2P01877 340 aa15.17■□□□□ 0.02
LINC01016-204ENST00000531046 ANTXR2P58335 489 aa15.17■□□□□ 0.02
LINC01016-204ENST00000531046 TRERF1Q96PN7 1200 aa15.17■□□□□ 0.02
LINC01016-204ENST00000531046 ACAD9Q9H845 621 aa15.17■□□□□ 0.02
LINC01016-204ENST00000531046 GPHNQ9NQX3 736 aaPredicted RBP15.17■□□□□ 0.02
LINC01016-204ENST00000531046 CEP290O15078 2479 aa15.16■□□□□ 0.02
LINC01016-204ENST00000531046 DNAJC25-GNG10A0A024R161 153 aa15.16■□□□□ 0.02
LINC01016-204ENST00000531046 PRC1O43663 620 aa15.16■□□□□ 0.02
LINC01016-204ENST00000531046 FARP2O94887 1054 aaPredicted RBP15.16■□□□□ 0.02
LINC01016-204ENST00000531046 ICAM1P05362 532 aa15.16■□□□□ 0.02
LINC01016-204ENST00000531046 PARP1P09874 1014 aaKnown RBP15.16■□□□□ 0.02
LINC01016-204ENST00000531046 CYBAP13498 195 aa15.16■□□□□ 0.02
LINC01016-204ENST00000531046 WTAPQ15007 396 aa15.16■□□□□ 0.02
LINC01016-204ENST00000531046 SART3Q15020 963 aaKnown RBP15.16■□□□□ 0.02
LINC01016-204ENST00000531046 TKFCQ3LXA3 575 aa15.16■□□□□ 0.02
LINC01016-204ENST00000531046 TMEM67Q5HYA8 995 aa15.16■□□□□ 0.02
LINC01016-204ENST00000531046 STAG2Q8N3U4 1231 aa15.16■□□□□ 0.02
LINC01016-204ENST00000531046 VAT1LQ9HCJ6 419 aa15.16■□□□□ 0.02
LINC01016-204ENST00000531046 DHX16O60231 1041 aaKnown RBP15.15■□□□□ 0.02
LINC01016-204ENST00000531046 CNTN2Q02246 1040 aa15.15■□□□□ 0.02
LINC01016-204ENST00000531046 ASPRV1Q53RT3 343 aa15.15■□□□□ 0.02
LINC01016-204ENST00000531046 ANO1Q5XXA6 986 aa15.15■□□□□ 0.02
LINC01016-204ENST00000531046 LHX8Q68G74 356 aa15.15■□□□□ 0.02
LINC01016-204ENST00000531046 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.15■□□□□ 0.02
LINC01016-204ENST00000531046 ADGRF4Q8IZF3 695 aa15.15■□□□□ 0.02
LINC01016-204ENST00000531046 IGDCC4Q8TDY8 1250 aa15.15■□□□□ 0.02
LINC01016-204ENST00000531046 DIS3LQ8TF46 1054 aaKnown RBP15.15■□□□□ 0.02
LINC01016-204ENST00000531046 TINF2Q9BSI4 451 aa15.15■□□□□ 0.02
LINC01016-204ENST00000531046 A1CFQ9NQ94 594 aaKnown RBP15.15■□□□□ 0.02
LINC01016-204ENST00000531046 DIS3Q9Y2L1 958 aaKnown RBP15.15■□□□□ 0.02
LINC01016-204ENST00000531046 POTEB2H3BUK9 544 aa15.14■□□□□ 0.01
LINC01016-204ENST00000531046 USH1GQ495M9 461 aa15.14■□□□□ 0.01
LINC01016-204ENST00000531046 RNF20Q5VTR2 975 aa15.14■□□□□ 0.01
LINC01016-204ENST00000531046 NSMFQ6X4W1 530 aa15.14■□□□□ 0.01
LINC01016-204ENST00000531046 UBE2Q1Q7Z7E8 422 aa15.14■□□□□ 0.01
LINC01016-204ENST00000531046 PAWRQ96IZ0 340 aaKnown RBP15.14■□□□□ 0.01
LINC01016-204ENST00000531046 FGD4Q96M96 766 aa15.14■□□□□ 0.01
LINC01016-204ENST00000531046 LRRC2Q9BYS8 371 aa15.14■□□□□ 0.01
LINC01016-204ENST00000531046 DDX20Q9UHI6 824 aaKnown RBP15.14■□□□□ 0.01
LINC01016-204ENST00000531046 OGDHLQ9ULD0 1010 aa15.14■□□□□ 0.01
LINC01016-204ENST00000531046 KLRF2D3W0D1 207 aa15.13■□□□□ 0.01
LINC01016-204ENST00000531046 NFIBO00712 420 aa15.13■□□□□ 0.01
LINC01016-204ENST00000531046 MCM5P33992 734 aa15.13■□□□□ 0.01
LINC01016-204ENST00000531046 CDC37Q16543 378 aaPredicted RBP15.13■□□□□ 0.01
LINC01016-204ENST00000531046 RASEFQ8IZ41 740 aa15.13■□□□□ 0.01
LINC01016-204ENST00000531046 PURBQ96QR8 312 aaKnown RBP15.13■□□□□ 0.01
LINC01016-204ENST00000531046 LY9Q9HBG7 655 aa15.13■□□□□ 0.01
LINC01016-204ENST00000531046 MAD2L2Q9UI95 211 aa15.13■□□□□ 0.01
LINC01016-204ENST00000531046 DDX49Q9Y6V7 483 aaKnown RBP15.13■□□□□ 0.01
LINC01016-204ENST00000531046 SOWAHBA6NEL2 793 aa15.12■□□□□ 0.01
LINC01016-204ENST00000531046 MNX1P50219 401 aaPredicted RBP15.12■□□□□ 0.01
LINC01016-204ENST00000531046 GRM4Q14833 912 aa15.12■□□□□ 0.01
LINC01016-204ENST00000531046 NFXL1Q6ZNB6 911 aa15.12■□□□□ 0.01
LINC01016-204ENST00000531046 CATIPQ7Z7H3 387 aa15.12■□□□□ 0.01
LINC01016-204ENST00000531046 NUP133Q8WUM0 1156 aa15.12■□□□□ 0.01
LINC01016-204ENST00000531046 CLEC4DQ8WXI8 215 aa15.12■□□□□ 0.01
LINC01016-204ENST00000531046 MYL10Q9BUA6 226 aa15.12■□□□□ 0.01
LINC01016-204ENST00000531046 JMJD4Q9H9V9 463 aa15.12■□□□□ 0.01
LINC01016-204ENST00000531046 CYP39A1Q9NYL5 469 aa15.12■□□□□ 0.01
LINC01016-204ENST00000531046 MCM3APO60318 1980 aa15.12■□□□□ 0.01
LINC01016-204ENST00000531046 BAZ2BQ9UIF8 2168 aaKnown RBP15.12■□□□□ 0.01
LINC01016-204ENST00000531046 PFASO15067 1338 aa15.12■□□□□ 0.01
LINC01016-204ENST00000531046 PTPDC1A2A3K4 754 aa15.11■□□□□ 0.01
LINC01016-204ENST00000531046 PALM3A6NDB9 673 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms