RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 CASC1Q6TDU7 716 aa21.95■■□□□ 1.1
GMDS-208ENST00000530927 ABRAQ8N0Z2 381 aa21.95■■□□□ 1.1
GMDS-208ENST00000530927 TRPV1Q8NER1 839 aa21.95■■□□□ 1.1
GMDS-208ENST00000530927 RANBP17Q9H2T7 1088 aaKnown RBP21.95■■□□□ 1.1
GMDS-208ENST00000530927 PLXNA1Q9UIW2 1896 aa21.94■■□□□ 1.1
GMDS-208ENST00000530927 IFIT3O14879 490 aaKnown RBP21.94■■□□□ 1.1
GMDS-208ENST00000530927 IGHA2P01877 340 aa21.94■■□□□ 1.1
GMDS-208ENST00000530927 ALAS1P13196 640 aa21.94■■□□□ 1.1
GMDS-208ENST00000530927 NT5C2P49902 561 aa21.94■■□□□ 1.1
GMDS-208ENST00000530927 KCTD2Q14681 263 aa21.94■■□□□ 1.1
GMDS-208ENST00000530927 CCDC178Q5BJE1 867 aa21.94■■□□□ 1.1
GMDS-208ENST00000530927 PRAMEF19Q5SWL8 479 aa21.94■■□□□ 1.1
GMDS-208ENST00000530927 MAML3Q96JK9 1138 aa21.94■■□□□ 1.1
GMDS-208ENST00000530927 HMX1Q9NP08 348 aaPredicted RBP21.94■■□□□ 1.1
GMDS-208ENST00000530927 RPTORQ8N122 1335 aa21.94■■□□□ 1.1
GMDS-208ENST00000530927 OAZ1P54368 228 aa21.93■■□□□ 1.1
GMDS-208ENST00000530927 MUM1L1Q5H9M0 696 aa21.93■■□□□ 1.1
GMDS-208ENST00000530927 TRMT44Q8IYL2 757 aaKnown RBP21.93■■□□□ 1.1
GMDS-208ENST00000530927 RASEFQ8IZ41 740 aa21.93■■□□□ 1.1
GMDS-208ENST00000530927 STAG2Q8N3U4 1231 aa21.93■■□□□ 1.1
GMDS-208ENST00000530927 RNF146Q9NTX7 359 aa21.93■■□□□ 1.1
GMDS-208ENST00000530927 SGPL1O95470 568 aa21.92■■□□□ 1.1
GMDS-208ENST00000530927 ZNF792Q3KQV3 632 aa21.92■■□□□ 1.1
GMDS-208ENST00000530927 TRERF1Q96PN7 1200 aa21.92■■□□□ 1.1
GMDS-208ENST00000530927 CCPG1Q9ULG6 757 aa21.92■■□□□ 1.1
GMDS-208ENST00000530927 COPB2P35606 906 aa21.91■■□□□ 1.1
GMDS-208ENST00000530927 TMEM67Q5HYA8 995 aa21.91■■□□□ 1.1
GMDS-208ENST00000530927 MFSD14CQ5VZR4 134 aa21.91■■□□□ 1.1
GMDS-208ENST00000530927 IGDCC4Q8TDY8 1250 aa21.91■■□□□ 1.1
GMDS-208ENST00000530927 LRRC2Q9BYS8 371 aa21.91■■□□□ 1.1
GMDS-208ENST00000530927 DNAJC25-GNG10A0A024R161 153 aa21.9■■□□□ 1.1
GMDS-208ENST00000530927 PRC1O43663 620 aa21.9■■□□□ 1.1
GMDS-208ENST00000530927 FDX1P10109 184 aa21.9■■□□□ 1.1
GMDS-208ENST00000530927 WTAPQ15007 396 aa21.9■■□□□ 1.1
GMDS-208ENST00000530927 OLFML2BQ68BL8 750 aa21.9■■□□□ 1.1
GMDS-208ENST00000530927 ANKRD35Q8N283 1001 aa21.9■■□□□ 1.1
GMDS-208ENST00000530927 FGD4Q96M96 766 aa21.9■■□□□ 1.1
GMDS-208ENST00000530927 DDX49Q9Y6V7 483 aaKnown RBP21.9■■□□□ 1.1
GMDS-208ENST00000530927 TFRCP02786 760 aaKnown RBP21.89■■□□□ 1.1
GMDS-208ENST00000530927 ICAM1P05362 532 aa21.89■■□□□ 1.1
GMDS-208ENST00000530927 PARP1P09874 1014 aaKnown RBP21.89■■□□□ 1.1
GMDS-208ENST00000530927 CNTN2Q02246 1040 aa21.89■■□□□ 1.1
GMDS-208ENST00000530927 SLC35G1Q2M3R5 365 aa21.89■■□□□ 1.1
GMDS-208ENST00000530927 ADCK5Q3MIX3 580 aa21.89■■□□□ 1.1
GMDS-208ENST00000530927 GPATCH4Q5T3I0 446 aaKnown RBP21.89■■□□□ 1.1
GMDS-208ENST00000530927 ANO1Q5XXA6 986 aa21.89■■□□□ 1.1
GMDS-208ENST00000530927 CHST13Q8NET6 341 aa21.89■■□□□ 1.1
GMDS-208ENST00000530927 DDX11Q96FC9 970 aa21.89■■□□□ 1.1
GMDS-208ENST00000530927 PURBQ96QR8 312 aaKnown RBP21.89■■□□□ 1.1
GMDS-208ENST00000530927 MYL10Q9BUA6 226 aa21.89■■□□□ 1.1
GMDS-208ENST00000530927 CRISPLD2Q9H0B8 497 aa21.89■■□□□ 1.1
GMDS-208ENST00000530927 ACAD9Q9H845 621 aa21.89■■□□□ 1.1
GMDS-208ENST00000530927 LY9Q9HBG7 655 aa21.89■■□□□ 1.1
GMDS-208ENST00000530927 A1CFQ9NQ94 594 aaKnown RBP21.89■■□□□ 1.1
GMDS-208ENST00000530927 CYBAP13498 195 aa21.89■■□□□ 1.09
GMDS-208ENST00000530927 CNGA1P29973 690 aa21.89■■□□□ 1.09
GMDS-208ENST00000530927 ADGRF4Q8IZF3 695 aa21.89■■□□□ 1.09
GMDS-208ENST00000530927 DIS3LQ8TF46 1054 aaKnown RBP21.89■■□□□ 1.09
GMDS-208ENST00000530927 TCEANC2Q96MN5 208 aa21.89■■□□□ 1.09
GMDS-208ENST00000530927 VAT1LQ9HCJ6 419 aa21.89■■□□□ 1.09
GMDS-208ENST00000530927 MAD2L2Q9UI95 211 aa21.89■■□□□ 1.09
GMDS-208ENST00000530927 FRMPD3Q5JV73 1810 aa21.88■■□□□ 1.09
GMDS-208ENST00000530927 ERICH2A1L162 156 aa21.88■■□□□ 1.09
GMDS-208ENST00000530927 NFIBO00712 420 aa21.88■■□□□ 1.09
GMDS-208ENST00000530927 ASPRV1Q53RT3 343 aa21.88■■□□□ 1.09
GMDS-208ENST00000530927 LHX8Q68G74 356 aa21.88■■□□□ 1.09
GMDS-208ENST00000530927 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.88■■□□□ 1.09
GMDS-208ENST00000530927 SLC5A4Q9NY91 659 aa21.88■■□□□ 1.09
GMDS-208ENST00000530927 LCTP09848 1927 aa21.87■■□□□ 1.09
GMDS-208ENST00000530927 CDC37Q16543 378 aaPredicted RBP21.87■■□□□ 1.09
GMDS-208ENST00000530927 USH1GQ495M9 461 aa21.87■■□□□ 1.09
GMDS-208ENST00000530927 UBE2Q1Q7Z7E8 422 aa21.87■■□□□ 1.09
GMDS-208ENST00000530927 RAB11FIP4Q86YS3 637 aa21.87■■□□□ 1.09
GMDS-208ENST00000530927 TINF2Q9BSI4 451 aa21.87■■□□□ 1.09
GMDS-208ENST00000530927 JMJD4Q9H9V9 463 aa21.87■■□□□ 1.09
GMDS-208ENST00000530927 FBXO40Q9UH90 709 aa21.87■■□□□ 1.09
GMDS-208ENST00000530927 ASTN1O14525 1302 aa21.86■■□□□ 1.09
GMDS-208ENST00000530927 SH2B2O14492 632 aaPredicted RBP21.86■■□□□ 1.09
GMDS-208ENST00000530927 CPA1P15085 419 aa21.86■■□□□ 1.09
GMDS-208ENST00000530927 MCM5P33992 734 aa21.86■■□□□ 1.09
GMDS-208ENST00000530927 MNX1P50219 401 aaPredicted RBP21.86■■□□□ 1.09
GMDS-208ENST00000530927 TROAPQ12815 778 aa21.86■■□□□ 1.09
GMDS-208ENST00000530927 NSMFQ6X4W1 530 aa21.86■■□□□ 1.09
GMDS-208ENST00000530927 CLEC4DQ8WXI8 215 aa21.86■■□□□ 1.09
GMDS-208ENST00000530927 PALM3A6NDB9 673 aaPredicted RBP21.85■■□□□ 1.09
GMDS-208ENST00000530927 SOWAHBA6NEL2 793 aa21.85■■□□□ 1.09
GMDS-208ENST00000530927 KLRF2D3W0D1 207 aa21.85■■□□□ 1.09
GMDS-208ENST00000530927 DHX16O60231 1041 aaKnown RBP21.85■■□□□ 1.09
GMDS-208ENST00000530927 FARP2O94887 1054 aaPredicted RBP21.85■■□□□ 1.09
GMDS-208ENST00000530927 RXRAP19793 462 aa21.85■■□□□ 1.09
GMDS-208ENST00000530927 GRM4Q14833 912 aa21.85■■□□□ 1.09
GMDS-208ENST00000530927 SART3Q15020 963 aaKnown RBP21.85■■□□□ 1.09
GMDS-208ENST00000530927 TKFCQ3LXA3 575 aa21.85■■□□□ 1.09
GMDS-208ENST00000530927 CYP39A1Q9NYL5 469 aa21.85■■□□□ 1.09
GMDS-208ENST00000530927 DIS3Q9Y2L1 958 aaKnown RBP21.85■■□□□ 1.09
GMDS-208ENST00000530927 SNAI1O95863 264 aaPredicted RBP21.84■■□□□ 1.09
GMDS-208ENST00000530927 QRICH1Q2TAL8 776 aa21.84■■□□□ 1.09
GMDS-208ENST00000530927 RNF20Q5VTR2 975 aa21.84■■□□□ 1.09
GMDS-208ENST00000530927 FAM133AQ8N9E0 248 aa21.84■■□□□ 1.09
GMDS-208ENST00000530927 NUP133Q8WUM0 1156 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms