RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PRC1O43663 620 aa14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 PARP1P09874 1014 aaKnown RBP14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 CCL5P13501 91 aa14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 HSPA4P34932 840 aa14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 TRIM32Q13049 653 aa14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 COL9A3Q14050 684 aaPredicted RBP14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 KCTD2Q14681 263 aa14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 TKFCQ3LXA3 575 aa14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 CCDC174Q6PII3 467 aa14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 CHST13Q8NET6 341 aa14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 TMEM87BQ96K49 555 aa14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 UBA5Q9GZZ9 404 aa14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 UNC93B1Q9H1C4 597 aa14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 SLC5A4Q9NY91 659 aa14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 FLRT1Q9NZU1 646 aa14.82□□□□□ -0.04
CCDC90B-216ENST00000529856 EPB41L2O43491 1005 aaKnown RBP14.81□□□□□ -0.04
CCDC90B-216ENST00000529856 IGHA2P01877 340 aa14.81□□□□□ -0.04
CCDC90B-216ENST00000529856 ICAM1P05362 532 aa14.81□□□□□ -0.04
CCDC90B-216ENST00000529856 KRT32Q14532 448 aa14.81□□□□□ -0.04
CCDC90B-216ENST00000529856 TMTC2Q8N394 836 aa14.81□□□□□ -0.04
CCDC90B-216ENST00000529856 NEK1Q96PY6 1258 aa14.81□□□□□ -0.04
CCDC90B-216ENST00000529856 RNF208Q9H0X6 261 aa14.81□□□□□ -0.04
CCDC90B-216ENST00000529856 LY9Q9HBG7 655 aa14.81□□□□□ -0.04
CCDC90B-216ENST00000529856 GPHNQ9NQX3 736 aaPredicted RBP14.81□□□□□ -0.04
CCDC90B-216ENST00000529856 FBXO40Q9UH90 709 aa14.81□□□□□ -0.04
CCDC90B-216ENST00000529856 KIAA0100Q14667 2235 aaKnown RBP14.81□□□□□ -0.04
CCDC90B-216ENST00000529856 PALM3A6NDB9 673 aaPredicted RBP14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 PGK2P07205 417 aa14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 GJB1P08034 283 aa14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 ALAS1P13196 640 aa14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 LIFRP42702 1097 aa14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 TROAPQ12815 778 aa14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 ZNF792Q3KQV3 632 aa14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 ADCK5Q3MIX3 580 aa14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 MAP3K21Q5TCX8 1036 aa14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 STAG2Q8N3U4 1231 aa14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 CPVLQ9H3G5 476 aa14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 ACAD9Q9H845 621 aa14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 HMX1Q9NP08 348 aaPredicted RBP14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 RNF146Q9NTX7 359 aa14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 DIS3Q9Y2L1 958 aaKnown RBP14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 RPTORQ8N122 1335 aa14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 RBBP6Q7Z6E9 1792 aaKnown RBP14.8□□□□□ -0.04
CCDC90B-216ENST00000529856 DNAJC25-GNG10A0A024R161 153 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 SMCHD1A6NHR9 2005 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 SH2B2O14492 632 aaPredicted RBP14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 EN2P19622 333 aaPredicted RBP14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 EXOSC10Q01780 885 aaKnown RBP14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 CACNB2Q08289 660 aaPredicted RBP14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 GRM4Q14833 912 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 MFSD14CQ5VZR4 134 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 OLFML2BQ68BL8 750 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 DHX32Q7L7V1 743 aaKnown RBP14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 CATIPQ7Z7H3 387 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 ADGRF4Q8IZF3 695 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 ANKRD35Q8N283 1001 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 WDR19Q8NEZ3 1342 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 DDX11Q96FC9 970 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 MAML3Q96JK9 1138 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 TRERF1Q96PN7 1200 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 USP26Q9BXU7 913 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 PAK6Q9NQU5 681 aaPredicted RBP14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 HOMER2Q9NSB8 354 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 MAD2L2Q9UI95 211 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 PNMA2Q9UL42 364 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 CCPG1Q9ULG6 757 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 SNX14Q9Y5W7 946 aa14.79□□□□□ -0.04
CCDC90B-216ENST00000529856 KLRF2D3W0D1 207 aa14.78□□□□□ -0.04
CCDC90B-216ENST00000529856 HMGB1P09429 215 aaKnown RBP14.78□□□□□ -0.04
CCDC90B-216ENST00000529856 GJA8P48165 433 aa14.78□□□□□ -0.04
CCDC90B-216ENST00000529856 MUM1L1Q5H9M0 696 aa14.78□□□□□ -0.04
CCDC90B-216ENST00000529856 ZNF654Q8IZM8 581 aa14.78□□□□□ -0.04
CCDC90B-216ENST00000529856 MAP3K14Q99558 947 aa14.78□□□□□ -0.04
CCDC90B-216ENST00000529856 LRRC2Q9BYS8 371 aa14.78□□□□□ -0.04
CCDC90B-216ENST00000529856 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.78□□□□□ -0.04
CCDC90B-216ENST00000529856 CCDC69A6NI79 296 aa14.77□□□□□ -0.05
CCDC90B-216ENST00000529856 SGPL1O95470 568 aa14.77□□□□□ -0.05
CCDC90B-216ENST00000529856 TAL1P17542 331 aaPredicted RBP14.77□□□□□ -0.05
CCDC90B-216ENST00000529856 CYP2C19P33261 490 aa14.77□□□□□ -0.05
CCDC90B-216ENST00000529856 NFXL1Q6ZNB6 911 aa14.77□□□□□ -0.05
CCDC90B-216ENST00000529856 DEFB118Q96PH6 123 aa14.77□□□□□ -0.05
CCDC90B-216ENST00000529856 JMJD4Q9H9V9 463 aa14.77□□□□□ -0.05
CCDC90B-216ENST00000529856 VAT1LQ9HCJ6 419 aa14.77□□□□□ -0.05
CCDC90B-216ENST00000529856 A1CFQ9NQ94 594 aaKnown RBP14.77□□□□□ -0.05
CCDC90B-216ENST00000529856 PLXNA1Q9UIW2 1896 aa14.77□□□□□ -0.05
CCDC90B-216ENST00000529856 DDAH1O94760 285 aa14.76□□□□□ -0.05
CCDC90B-216ENST00000529856 CAPN2P17655 700 aa14.76□□□□□ -0.05
CCDC90B-216ENST00000529856 CDC37Q16543 378 aaPredicted RBP14.76□□□□□ -0.05
CCDC90B-216ENST00000529856 SGMS1Q86VZ5 419 aa14.76□□□□□ -0.05
CCDC90B-216ENST00000529856 U2AF1L4Q8WU68 220 aaKnown RBP14.76□□□□□ -0.05
CCDC90B-216ENST00000529856 NUP133Q8WUM0 1156 aa14.76□□□□□ -0.05
CCDC90B-216ENST00000529856 MTMR8Q96EF0 704 aa14.76□□□□□ -0.05
CCDC90B-216ENST00000529856 BRCA2P51587 3418 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 PFASO15067 1338 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 DHX16O60231 1041 aaKnown RBP14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 CALM1P0DP23 149 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 CALM2P0DP24 149 aa14.75□□□□□ -0.05
CCDC90B-216ENST00000529856 CALM3P0DP25 149 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms