RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.82	□□□□□ -0.2
PSMC3-205	ENST00000528362	KRT23	Q9C075	422 aa		13.82	□□□□□ -0.2
PSMC3-205	ENST00000528362	RANBP17	Q9H2T7	1088 aa	Known RBP	13.82	□□□□□ -0.2
PSMC3-205	ENST00000528362	RNF146	Q9NTX7	359 aa		13.82	□□□□□ -0.2
PSMC3-205	ENST00000528362	FBXO40	Q9UH90	709 aa		13.82	□□□□□ -0.2
PSMC3-205	ENST00000528362		U3KPZ7	1027 aa	Predicted RBP	13.82	□□□□□ -0.2
PSMC3-205	ENST00000528362		H0YGN5	161 aa		13.81	□□□□□ -0.2
PSMC3-205	ENST00000528362	SEPT4	O43236	478 aa		13.81	□□□□□ -0.2
PSMC3-205	ENST00000528362	TKFC	Q3LXA3	575 aa		13.81	□□□□□ -0.2
PSMC3-205	ENST00000528362	CCDC178	Q5BJE1	867 aa		13.81	□□□□□ -0.2
PSMC3-205	ENST00000528362	BMP2KL	Q5H9B9	411 aa		13.81	□□□□□ -0.2
PSMC3-205	ENST00000528362	PNMA1	Q8ND90	353 aa		13.81	□□□□□ -0.2
PSMC3-205	ENST00000528362	TINF2	Q9BSI4	451 aa		13.81	□□□□□ -0.2
PSMC3-205	ENST00000528362	ACAD9	Q9H845	621 aa		13.81	□□□□□ -0.2
PSMC3-205	ENST00000528362	NRBP1	Q9UHY1	535 aa		13.81	□□□□□ -0.2
PSMC3-205	ENST00000528362	PFAS	O15067	1338 aa		13.81	□□□□□ -0.2
PSMC3-205	ENST00000528362	TNKS	O95271	1327 aa		13.81	□□□□□ -0.2
PSMC3-205	ENST00000528362	ICAM1	P05362	532 aa		13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	GOLGA8H	P0CJ92	632 aa		13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	COL6A1	P12109	1028 aa		13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	ALAS1	P13196	640 aa		13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	MUM1L1	Q5H9M0	696 aa		13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	ANO1	Q5XXA6	986 aa		13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	CYB5R4	Q7L1T6	521 aa		13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	ANKRD35	Q8N283	1001 aa		13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	MAP4K1	Q92918	833 aa		13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	ESYT1	Q9BSJ8	1104 aa		13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	UBAC1	Q9BSL1	405 aa		13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	C11orf49	Q9H6J7	331 aa		13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	KAT14	Q9H8E8	782 aa		13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	A1CF	Q9NQ94	594 aa	Known RBP	13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	CCPG1	Q9ULG6	757 aa		13.8	□□□□□ -0.2
PSMC3-205	ENST00000528362	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.79	□□□□□ -0.2
PSMC3-205	ENST00000528362	CNTN2	Q02246	1040 aa		13.79	□□□□□ -0.2
PSMC3-205	ENST00000528362	SEC23A	Q15436	765 aa		13.79	□□□□□ -0.2
PSMC3-205	ENST00000528362	GPATCH4	Q5T3I0	446 aa	Known RBP	13.79	□□□□□ -0.2
PSMC3-205	ENST00000528362	MAMDC4	Q6UXC1	1216 aa		13.79	□□□□□ -0.2
PSMC3-205	ENST00000528362	STOX1	Q6ZVD7	989 aa		13.79	□□□□□ -0.2
PSMC3-205	ENST00000528362	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.79	□□□□□ -0.2
PSMC3-205	ENST00000528362	MSL3	Q8N5Y2	521 aa	Known RBP	13.79	□□□□□ -0.2
PSMC3-205	ENST00000528362	TRERF1	Q96PN7	1200 aa		13.79	□□□□□ -0.2
PSMC3-205	ENST00000528362	LSG1	Q9H089	658 aa	Known RBP	13.79	□□□□□ -0.2
PSMC3-205	ENST00000528362	RBM8A	Q9Y5S9	174 aa	Known RBP	13.79	□□□□□ -0.2
PSMC3-205	ENST00000528362	MYH4	Q9Y623	1939 aa		13.79	□□□□□ -0.2
PSMC3-205	ENST00000528362	SYNGAP1	Q96PV0	1343 aa		13.79	□□□□□ -0.2
PSMC3-205	ENST00000528362	RANBP2	P49792	3224 aa	Known RBP	13.79	□□□□□ -0.2
PSMC3-205	ENST00000528362	SNAI1	O95863	264 aa	Predicted RBP	13.78	□□□□□ -0.2
PSMC3-205	ENST00000528362	TRDN	Q13061	729 aa		13.78	□□□□□ -0.2
PSMC3-205	ENST00000528362	FAM133A	Q8N9E0	248 aa		13.78	□□□□□ -0.2
PSMC3-205	ENST00000528362	CCDC136	Q96JN2	1154 aa		13.78	□□□□□ -0.2
PSMC3-205	ENST00000528362	UBA5	Q9GZZ9	404 aa		13.78	□□□□□ -0.2
PSMC3-205	ENST00000528362	CPVL	Q9H3G5	476 aa		13.78	□□□□□ -0.2
PSMC3-205	ENST00000528362	CNPY2	Q9Y2B0	182 aa		13.78	□□□□□ -0.2
PSMC3-205	ENST00000528362	COL11A1	P12107	1806 aa	Predicted RBP	13.78	□□□□□ -0.2
PSMC3-205	ENST00000528362	LAMA4	Q16363	1823 aa		13.78	□□□□□ -0.2
PSMC3-205	ENST00000528362		E7EWF7	191 aa		13.77	□□□□□ -0.21
PSMC3-205	ENST00000528362	POTEB2	H3BUK9	544 aa		13.77	□□□□□ -0.21
PSMC3-205	ENST00000528362	DNM1L	O00429	736 aa		13.77	□□□□□ -0.21
PSMC3-205	ENST00000528362	ASTN1	O14525	1302 aa		13.77	□□□□□ -0.21
PSMC3-205	ENST00000528362	EVI5	O60447	810 aa		13.77	□□□□□ -0.21
PSMC3-205	ENST00000528362	HABP4	Q5JVS0	413 aa	Known RBP	13.77	□□□□□ -0.21
PSMC3-205	ENST00000528362	IFIT1B	Q5T764	474 aa	Known RBP	13.77	□□□□□ -0.21
PSMC3-205	ENST00000528362	ARMCX2	Q7L311	632 aa		13.77	□□□□□ -0.21
PSMC3-205	ENST00000528362	LENG1	Q96BZ8	264 aa	Predicted RBP	13.77	□□□□□ -0.21
PSMC3-205	ENST00000528362	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.77	□□□□□ -0.21
PSMC3-205	ENST00000528362	CYP39A1	Q9NYL5	469 aa		13.77	□□□□□ -0.21
PSMC3-205	ENST00000528362	NR2E3	Q9Y5X4	410 aa		13.77	□□□□□ -0.21
PSMC3-205	ENST00000528362	WDR19	Q8NEZ3	1342 aa		13.76	□□□□□ -0.21
PSMC3-205	ENST00000528362	SOWAHB	A6NEL2	793 aa		13.76	□□□□□ -0.21
PSMC3-205	ENST00000528362	NFIB	O00712	420 aa		13.76	□□□□□ -0.21
PSMC3-205	ENST00000528362	AKR1A1	P14550	325 aa		13.76	□□□□□ -0.21
PSMC3-205	ENST00000528362	ASPRV1	Q53RT3	343 aa		13.76	□□□□□ -0.21
PSMC3-205	ENST00000528362	GJC2	Q5T442	439 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMC3-205	ENST00000528362	NSMF	Q6X4W1	530 aa		13.76	□□□□□ -0.21
PSMC3-205	ENST00000528362	KIAA1211	Q6ZU35	1233 aa		13.76	□□□□□ -0.21
PSMC3-205	ENST00000528362	RALYL	Q86SE5	291 aa	Known RBP	13.76	□□□□□ -0.21
PSMC3-205	ENST00000528362	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMC3-205	ENST00000528362	CLEC4D	Q8WXI8	215 aa		13.76	□□□□□ -0.21
PSMC3-205	ENST00000528362	SENP2	Q9HC62	589 aa		13.76	□□□□□ -0.21
PSMC3-205	ENST00000528362	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMC3-205	ENST00000528362	IFIT3	O14879	490 aa	Known RBP	13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	PARP1	P09874	1014 aa	Known RBP	13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	RARB	P10826	455 aa		13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	ANTXR2	P58335	489 aa		13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	ACVR2B	Q13705	512 aa		13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	LRRC41	Q15345	812 aa		13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	LRRC26	Q2I0M4	334 aa		13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	CCDC144CP	Q8IYA2	1237 aa		13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	C7orf61	Q8IZ16	206 aa		13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	ARRDC4	Q8NCT1	418 aa		13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	NCOA7	Q8NI08	942 aa		13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	PURB	Q96QR8	312 aa	Known RBP	13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	KATNBL1	Q9H079	304 aa		13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	ANO2	Q9NQ90	1003 aa		13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	XPNPEP3	Q9NQH7	507 aa		13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	DDX49	Q9Y6V7	483 aa	Known RBP	13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	DNAH12	Q6ZR08	3092 aa		13.75	□□□□□ -0.21
PSMC3-205	ENST00000528362	CEP290	O15078	2479 aa		13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	KBTBD13	C9JR72	458 aa		13.74	□□□□□ -0.21
PSMC3-205	ENST00000528362	SLC27A2	O14975	620 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms