RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 PTH1RQ03431 593 aa18.25■□□□□ 0.51
CAPN1-213ENST00000527897 SYDE2Q5VT97 1194 aa18.25■□□□□ 0.51
CAPN1-213ENST00000527897 CENPQQ7L2Z9 268 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-213ENST00000527897 TRERF1Q96PN7 1200 aa18.25■□□□□ 0.51
CAPN1-213ENST00000527897 KRT23Q9C075 422 aa18.25■□□□□ 0.51
CAPN1-213ENST00000527897 ACAD9Q9H845 621 aa18.25■□□□□ 0.51
CAPN1-213ENST00000527897 KAT14Q9H8E8 782 aa18.25■□□□□ 0.51
CAPN1-213ENST00000527897 CCPG1Q9ULG6 757 aa18.25■□□□□ 0.51
CAPN1-213ENST00000527897 DIS3Q9Y2L1 958 aaKnown RBP18.25■□□□□ 0.51
CAPN1-213ENST00000527897 ZNF536O15090 1300 aa18.24■□□□□ 0.51
CAPN1-213ENST00000527897 SMCHD1A6NHR9 2005 aa18.24■□□□□ 0.51
CAPN1-213ENST00000527897 GJC2Q5T442 439 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-213ENST00000527897 ZSCAN10Q96SZ4 725 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-213ENST00000527897 UBAC1Q9BSL1 405 aa18.24■□□□□ 0.51
CAPN1-213ENST00000527897 SENP6Q9GZR1 1112 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-213ENST00000527897 CNNM2Q9H8M5 875 aa18.24■□□□□ 0.51
CAPN1-213ENST00000527897 ZSWIM5Q9P217 1185 aa18.24■□□□□ 0.51
CAPN1-213ENST00000527897 CNPY2Q9Y2B0 182 aa18.24■□□□□ 0.51
CAPN1-213ENST00000527897 PFASO15067 1338 aa18.23■□□□□ 0.51
CAPN1-213ENST00000527897 GOLGA8HP0CJ92 632 aa18.23■□□□□ 0.51
CAPN1-213ENST00000527897 CCDC178Q5BJE1 867 aa18.23■□□□□ 0.51
CAPN1-213ENST00000527897 CHRDL2Q6WN34 429 aa18.23■□□□□ 0.51
CAPN1-213ENST00000527897 DGKHQ86XP1 1220 aa18.23■□□□□ 0.51
CAPN1-213ENST00000527897 PNMA1Q8ND90 353 aa18.23■□□□□ 0.51
CAPN1-213ENST00000527897 ZHX1Q9UKY1 873 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-213ENST00000527897 COLQQ9Y215 455 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-213ENST00000527897 TNKSO95271 1327 aa18.23■□□□□ 0.51
CAPN1-213ENST00000527897 MCM3APO60318 1980 aa18.22■□□□□ 0.51
CAPN1-213ENST00000527897 DNAJC25-GNG10A0A024R161 153 aa18.22■□□□□ 0.51
CAPN1-213ENST00000527897 KBTBD13C9JR72 458 aa18.22■□□□□ 0.51
CAPN1-213ENST00000527897 POTEB2H3BUK9 544 aa18.22■□□□□ 0.51
CAPN1-213ENST00000527897 SGSM2O43147 1006 aa18.22■□□□□ 0.51
CAPN1-213ENST00000527897 CNTN2Q02246 1040 aa18.22■□□□□ 0.51
CAPN1-213ENST00000527897 ZNF543Q08ER8 600 aa18.22■□□□□ 0.51
CAPN1-213ENST00000527897 TRDNQ13061 729 aa18.22■□□□□ 0.51
CAPN1-213ENST00000527897 TKFCQ3LXA3 575 aa18.22■□□□□ 0.51
CAPN1-213ENST00000527897 MUM1L1Q5H9M0 696 aa18.22■□□□□ 0.51
CAPN1-213ENST00000527897 NSMFQ6X4W1 530 aa18.22■□□□□ 0.51
CAPN1-213ENST00000527897 ARRDC4Q8NCT1 418 aa18.22■□□□□ 0.51
CAPN1-213ENST00000527897 RANBP17Q9H2T7 1088 aaKnown RBP18.22■□□□□ 0.51
CAPN1-213ENST00000527897 ZMYND8Q9ULU4 1186 aaPredicted RBP18.22■□□□□ 0.51
CAPN1-213ENST00000527897 U3KPZ7 1027 aaPredicted RBP18.22■□□□□ 0.51
CAPN1-213ENST00000527897 ICAM1P05362 532 aa18.21■□□□□ 0.51
CAPN1-213ENST00000527897 RARBP10826 455 aa18.21■□□□□ 0.51
CAPN1-213ENST00000527897 NT5C2P49902 561 aa18.21■□□□□ 0.51
CAPN1-213ENST00000527897 ATN1P54259 1190 aaPredicted RBP18.21■□□□□ 0.51
CAPN1-213ENST00000527897 BTNL9Q6UXG8 535 aa18.21■□□□□ 0.51
CAPN1-213ENST00000527897 ENAHQ8N8S7 591 aaPredicted RBP18.21■□□□□ 0.51
CAPN1-213ENST00000527897 LENG1Q96BZ8 264 aaPredicted RBP18.21■□□□□ 0.51
CAPN1-213ENST00000527897 UBA5Q9GZZ9 404 aa18.21■□□□□ 0.51
CAPN1-213ENST00000527897 CPVLQ9H3G5 476 aa18.21■□□□□ 0.51
CAPN1-213ENST00000527897 A1CFQ9NQ94 594 aaKnown RBP18.21■□□□□ 0.51
CAPN1-213ENST00000527897 DNM1LO00429 736 aa18.2■□□□□ 0.5
CAPN1-213ENST00000527897 CYP21A2P08686 494 aa18.2■□□□□ 0.5
CAPN1-213ENST00000527897 COL6A1P12109 1028 aa18.2■□□□□ 0.5
CAPN1-213ENST00000527897 HABP4Q5JVS0 413 aaKnown RBP18.2■□□□□ 0.5
CAPN1-213ENST00000527897 IFIT1BQ5T764 474 aaKnown RBP18.2■□□□□ 0.5
CAPN1-213ENST00000527897 KIAA1211Q6ZU35 1233 aa18.2■□□□□ 0.5
CAPN1-213ENST00000527897 CYB5R4Q7L1T6 521 aa18.2■□□□□ 0.5
CAPN1-213ENST00000527897 RALYLQ86SE5 291 aaKnown RBP18.2■□□□□ 0.5
CAPN1-213ENST00000527897 CCDC136Q96JN2 1154 aa18.2■□□□□ 0.5
CAPN1-213ENST00000527897 XPNPEP3Q9NQH7 507 aa18.2■□□□□ 0.5
CAPN1-213ENST00000527897 NRBP1Q9UHY1 535 aa18.2■□□□□ 0.5
CAPN1-213ENST00000527897 SYNGAP1Q96PV0 1343 aa18.2■□□□□ 0.5
CAPN1-213ENST00000527897 DHX16O60231 1041 aaKnown RBP18.19■□□□□ 0.5
CAPN1-213ENST00000527897 SNAI1O95863 264 aaPredicted RBP18.19■□□□□ 0.5
CAPN1-213ENST00000527897 PGK1P00558 417 aa18.19■□□□□ 0.5
CAPN1-213ENST00000527897 ZNF865P0CJ78 1059 aaPredicted RBP18.19■□□□□ 0.5
CAPN1-213ENST00000527897 SNHG28P0DPA3 235 aa18.19■□□□□ 0.5
CAPN1-213ENST00000527897 AKR1A1P14550 325 aa18.19■□□□□ 0.5
CAPN1-213ENST00000527897 SYN1P17600 705 aa18.19■□□□□ 0.5
CAPN1-213ENST00000527897 LRRC26Q2I0M4 334 aa18.19■□□□□ 0.5
CAPN1-213ENST00000527897 GPATCH4Q5T3I0 446 aaKnown RBP18.19■□□□□ 0.5
CAPN1-213ENST00000527897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.19■□□□□ 0.5
CAPN1-213ENST00000527897 ARMCX2Q7L311 632 aa18.19■□□□□ 0.5
CAPN1-213ENST00000527897 MSL3Q8N5Y2 521 aaKnown RBP18.19■□□□□ 0.5
CAPN1-213ENST00000527897 FGD4Q96M96 766 aa18.19■□□□□ 0.5
CAPN1-213ENST00000527897 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.19■□□□□ 0.5
CAPN1-213ENST00000527897 ACVR2BQ13705 512 aa18.18■□□□□ 0.5
CAPN1-213ENST00000527897 LRRC41Q15345 812 aa18.18■□□□□ 0.5
CAPN1-213ENST00000527897 USH1GQ495M9 461 aa18.18■□□□□ 0.5
CAPN1-213ENST00000527897 MAMDC4Q6UXC1 1216 aa18.18■□□□□ 0.5
CAPN1-213ENST00000527897 ZNF467Q7Z7K2 595 aaPredicted RBP18.18■□□□□ 0.5
CAPN1-213ENST00000527897 CCDC144CPQ8IYA2 1237 aa18.18■□□□□ 0.5
CAPN1-213ENST00000527897 FERMT2Q96AC1 680 aa18.18■□□□□ 0.5
CAPN1-213ENST00000527897 CYP39A1Q9NYL5 469 aa18.18■□□□□ 0.5
CAPN1-213ENST00000527897 PCDH10Q9P2E7 1040 aa18.18■□□□□ 0.5
CAPN1-213ENST00000527897 FAM184BQ9ULE4 1060 aa18.18■□□□□ 0.5
CAPN1-213ENST00000527897 RBM8AQ9Y5S9 174 aaKnown RBP18.18■□□□□ 0.5
CAPN1-213ENST00000527897 TAF6LQ9Y6J9 622 aa18.18■□□□□ 0.5
CAPN1-213ENST00000527897 PTPDC1A2A3K4 754 aa18.17■□□□□ 0.5
CAPN1-213ENST00000527897 SOWAHBA6NEL2 793 aa18.17■□□□□ 0.5
CAPN1-213ENST00000527897 E7EWF7 191 aa18.17■□□□□ 0.5
CAPN1-213ENST00000527897 NFIBO00712 420 aa18.17■□□□□ 0.5
CAPN1-213ENST00000527897 ADCYAP1R1P41586 468 aa18.17■□□□□ 0.5
CAPN1-213ENST00000527897 CHST3Q7LGC8 479 aa18.17■□□□□ 0.5
CAPN1-213ENST00000527897 FAM133AQ8N9E0 248 aa18.17■□□□□ 0.5
CAPN1-213ENST00000527897 ANKS1AQ92625 1134 aa18.17■□□□□ 0.5
CAPN1-213ENST00000527897 PURBQ96QR8 312 aaKnown RBP18.17■□□□□ 0.5
CAPN1-213ENST00000527897 VAT1LQ9HCJ6 419 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms