RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 MFSD6Q6ZSS7 791 aa12.32□□□□□ -0.44
PRPF40B-204ENST00000527253 DCAF4Q8WV16 495 aa12.32□□□□□ -0.44
PRPF40B-204ENST00000527253 FRMPD2Q68DX3 1309 aaPredicted RBP12.32□□□□□ -0.44
PRPF40B-204ENST00000527253 SOWAHBA6NEL2 793 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 PGK1P00558 417 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 FDX1P10109 184 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 MAGEA10P43363 369 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 MFAP1P55081 439 aaKnown RBP12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 IKQ13123 557 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 CCDC96Q2M329 555 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 MUM1L1Q5H9M0 696 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 BTNL9Q6UXG8 535 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 ZNF467Q7Z7K2 595 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 ANKRD35Q8N283 1001 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 MSL3Q8N5Y2 521 aaKnown RBP12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 ARRDC4Q8NCT1 418 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 ZKSCAN3Q9BRR0 538 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 DSCC1Q9BVC3 393 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 ACAD9Q9H845 621 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 GPCPD1Q9NPB8 672 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 A1CFQ9NQ94 594 aaKnown RBP12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 RNF146Q9NTX7 359 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 FBXO40Q9UH90 709 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 DDX49Q9Y6V7 483 aaKnown RBP12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 ASTN1O14525 1302 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 SYNGAP1Q96PV0 1343 aa12.31□□□□□ -0.44
PRPF40B-204ENST00000527253 MCM3APO60318 1980 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 HIP1O00291 1037 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 SOX1O00570 391 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 ZNF213O14771 459 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 ADCY6O43306 1168 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 SNHG28P0DPA3 235 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 PDHBP11177 359 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 PCP11498 1178 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 ALAS1P13196 640 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 BMP8BP34820 402 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 ADCYAP1R1P41586 468 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 IRX5P78411 483 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 SLC39A5Q6ZMH5 540 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 FAM133AQ8N9E0 248 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 FERMT2Q96AC1 680 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 TTC14Q96N46 770 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 TRERF1Q96PN7 1200 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 PURBQ96QR8 312 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 KATNBL1Q9H079 304 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 RANBP17Q9H2T7 1088 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 XPNPEP3Q9NQH7 507 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 PHF24Q9UPV7 400 aa12.3□□□□□ -0.44
PRPF40B-204ENST00000527253 B4E1Z4 1266 aa12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 KDM4AO75164 1064 aa12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 ADAMTS4O75173 837 aa12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 RARBP10826 455 aa12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 AKR1A1P14550 325 aa12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 RTP1P59025 263 aa12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 ZNF543Q08ER8 600 aa12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 ACVR2BQ13705 512 aa12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 TKFCQ3LXA3 575 aa12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 SYDE2Q5VT97 1194 aa12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 ARMCX2Q7L311 632 aa12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 ESR2Q92731 530 aa12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 RNF41Q9H4P4 317 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 ZHX1Q9UKY1 873 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 CNPY2Q9Y2B0 182 aa12.29□□□□□ -0.44
PRPF40B-204ENST00000527253 LAMA4Q16363 1823 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 MYADML2A6NDP7 307 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 KBTBD13C9JR72 458 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 POTEB2H3BUK9 544 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 ICAM1P05362 532 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 GOLGA8HP0CJ92 632 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 CHMLP26374 656 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 PTH1RQ03431 593 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 SNX17Q15036 470 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 TRIM60Q495X7 471 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 CCSAPQ6IQ19 270 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 DGKHQ86XP1 1220 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 CCDC144CPQ8IYA2 1237 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 KLHDC9Q8NEP7 349 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 ANKS1AQ92625 1134 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 CPVLQ9H3G5 476 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 CYP39A1Q9NYL5 469 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 ZSWIM5Q9P217 1185 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 FAM184BQ9ULE4 1060 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 CCPG1Q9ULG6 757 aa12.28□□□□□ -0.44
PRPF40B-204ENST00000527253 A0A1W2PPC1 479 aa12.27□□□□□ -0.45
PRPF40B-204ENST00000527253 PTGS1P23219 599 aa12.27□□□□□ -0.45
PRPF40B-204ENST00000527253 MDM2Q00987 491 aaPredicted RBP12.27□□□□□ -0.45
PRPF40B-204ENST00000527253 CCDC144BQ3MJ40 725 aa12.27□□□□□ -0.45
PRPF40B-204ENST00000527253 SH3RF1Q7Z6J0 888 aa12.27□□□□□ -0.45
PRPF40B-204ENST00000527253 CLEC4DQ8WXI8 215 aa12.27□□□□□ -0.45
PRPF40B-204ENST00000527253 ZSCAN10Q96SZ4 725 aaPredicted RBP12.27□□□□□ -0.45
PRPF40B-204ENST00000527253 UBA5Q9GZZ9 404 aa12.27□□□□□ -0.45
PRPF40B-204ENST00000527253 ABHD16BQ9H3Z7 469 aa12.27□□□□□ -0.45
PRPF40B-204ENST00000527253 CTNNA3Q9UI47 895 aa12.27□□□□□ -0.45
PRPF40B-204ENST00000527253 ATP11BQ9Y2G3 1177 aa12.27□□□□□ -0.45
PRPF40B-204ENST00000527253 TAF6LQ9Y6J9 622 aa12.27□□□□□ -0.45
PRPF40B-204ENST00000527253 SYNRGQ9UMZ2 1314 aa12.27□□□□□ -0.45
PRPF40B-204ENST00000527253 LCTP09848 1927 aa12.27□□□□□ -0.45
PRPF40B-204ENST00000527253 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms