RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 AGBL1Q96MI9 1066 aa17.61■□□□□ 0.41
HIF3A-210ENST00000526506 HOMER2Q9NSB8 354 aa17.61■□□□□ 0.41
HIF3A-210ENST00000526506 FLRT1Q9NZU1 646 aa17.61■□□□□ 0.41
HIF3A-210ENST00000526506 ICAM1P05362 532 aa17.6■□□□□ 0.41
HIF3A-210ENST00000526506 GJB1P08034 283 aa17.6■□□□□ 0.41
HIF3A-210ENST00000526506 MAP3K21Q5TCX8 1036 aa17.6■□□□□ 0.41
HIF3A-210ENST00000526506 OLFML2BQ68BL8 750 aa17.6■□□□□ 0.41
HIF3A-210ENST00000526506 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.6■□□□□ 0.41
HIF3A-210ENST00000526506 TMEM87BQ96K49 555 aa17.6■□□□□ 0.41
HIF3A-210ENST00000526506 HMX1Q9NP08 348 aaPredicted RBP17.6■□□□□ 0.41
HIF3A-210ENST00000526506 RNF146Q9NTX7 359 aa17.6■□□□□ 0.41
HIF3A-210ENST00000526506 PNMA2Q9UL42 364 aa17.6■□□□□ 0.41
HIF3A-210ENST00000526506 CCPG1Q9ULG6 757 aa17.6■□□□□ 0.41
HIF3A-210ENST00000526506 RPTORQ8N122 1335 aa17.6■□□□□ 0.41
HIF3A-210ENST00000526506 PGK2P07205 417 aa17.59■□□□□ 0.41
HIF3A-210ENST00000526506 ALAS1P13196 640 aa17.59■□□□□ 0.41
HIF3A-210ENST00000526506 EN2P19622 333 aaPredicted RBP17.59■□□□□ 0.41
HIF3A-210ENST00000526506 KRT32Q14532 448 aa17.59■□□□□ 0.41
HIF3A-210ENST00000526506 TSGA10IPQ3SY00 556 aa17.59■□□□□ 0.41
HIF3A-210ENST00000526506 RASEFQ8IZ41 740 aa17.59■□□□□ 0.41
HIF3A-210ENST00000526506 ANKRD35Q8N283 1001 aa17.59■□□□□ 0.41
HIF3A-210ENST00000526506 DDX11Q96FC9 970 aa17.59■□□□□ 0.41
HIF3A-210ENST00000526506 NEK1Q96PY6 1258 aa17.59■□□□□ 0.41
HIF3A-210ENST00000526506 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.59■□□□□ 0.41
HIF3A-210ENST00000526506 ACAD9Q9H845 621 aa17.59■□□□□ 0.41
HIF3A-210ENST00000526506 SENP2Q9HC62 589 aa17.59■□□□□ 0.41
HIF3A-210ENST00000526506 PAK6Q9NQU5 681 aaPredicted RBP17.59■□□□□ 0.41
HIF3A-210ENST00000526506 KIAA0100Q14667 2235 aaKnown RBP17.59■□□□□ 0.41
HIF3A-210ENST00000526506 EPB41L2O43491 1005 aaKnown RBP17.58■□□□□ 0.4
HIF3A-210ENST00000526506 CYP2C19P33261 490 aa17.58■□□□□ 0.4
HIF3A-210ENST00000526506 HSPA4P34932 840 aa17.58■□□□□ 0.4
HIF3A-210ENST00000526506 GJA8P48165 433 aa17.58■□□□□ 0.4
HIF3A-210ENST00000526506 CACNB2Q08289 660 aaPredicted RBP17.58■□□□□ 0.4
HIF3A-210ENST00000526506 ZNF792Q3KQV3 632 aa17.58■□□□□ 0.4
HIF3A-210ENST00000526506 CATIPQ7Z7H3 387 aa17.58■□□□□ 0.4
HIF3A-210ENST00000526506 U2AF1L4Q8WU68 220 aaKnown RBP17.58■□□□□ 0.4
HIF3A-210ENST00000526506 MAML3Q96JK9 1138 aa17.58■□□□□ 0.4
HIF3A-210ENST00000526506 TRERF1Q96PN7 1200 aa17.58■□□□□ 0.4
HIF3A-210ENST00000526506 UBA5Q9GZZ9 404 aa17.58■□□□□ 0.4
HIF3A-210ENST00000526506 CPVLQ9H3G5 476 aa17.58■□□□□ 0.4
HIF3A-210ENST00000526506 LY9Q9HBG7 655 aa17.58■□□□□ 0.4
HIF3A-210ENST00000526506 DIS3Q9Y2L1 958 aaKnown RBP17.58■□□□□ 0.4
HIF3A-210ENST00000526506 WDR19Q8NEZ3 1342 aa17.57■□□□□ 0.4
HIF3A-210ENST00000526506 SH2B2O14492 632 aaPredicted RBP17.57■□□□□ 0.4
HIF3A-210ENST00000526506 DHX16O60231 1041 aaKnown RBP17.57■□□□□ 0.4
HIF3A-210ENST00000526506 IGHA2P01877 340 aa17.57■□□□□ 0.4
HIF3A-210ENST00000526506 TROAPQ12815 778 aa17.57■□□□□ 0.4
HIF3A-210ENST00000526506 COL9A3Q14050 684 aaPredicted RBP17.57■□□□□ 0.4
HIF3A-210ENST00000526506 GRM4Q14833 912 aa17.57■□□□□ 0.4
HIF3A-210ENST00000526506 ADGRF4Q8IZF3 695 aa17.57■□□□□ 0.4
HIF3A-210ENST00000526506 TMTC2Q8N394 836 aa17.57■□□□□ 0.4
HIF3A-210ENST00000526506 KCNB2Q92953 911 aa17.57■□□□□ 0.4
HIF3A-210ENST00000526506 DEFB118Q96PH6 123 aa17.57■□□□□ 0.4
HIF3A-210ENST00000526506 GPHNQ9NQX3 736 aaPredicted RBP17.57■□□□□ 0.4
HIF3A-210ENST00000526506 CENPFP49454 3210 aa17.57■□□□□ 0.4
HIF3A-210ENST00000526506 DNAJC25-GNG10A0A024R161 153 aa17.56■□□□□ 0.4
HIF3A-210ENST00000526506 PALM3A6NDB9 673 aaPredicted RBP17.56■□□□□ 0.4
HIF3A-210ENST00000526506 KLRF2D3W0D1 207 aa17.56■□□□□ 0.4
HIF3A-210ENST00000526506 DDAH1O94760 285 aa17.56■□□□□ 0.4
HIF3A-210ENST00000526506 SGPL1O95470 568 aa17.56■□□□□ 0.4
HIF3A-210ENST00000526506 LIFRP42702 1097 aa17.56■□□□□ 0.4
HIF3A-210ENST00000526506 CDC37Q16543 378 aaPredicted RBP17.56■□□□□ 0.4
HIF3A-210ENST00000526506 ADCK5Q3MIX3 580 aa17.56■□□□□ 0.4
HIF3A-210ENST00000526506 NFXL1Q6ZNB6 911 aa17.56■□□□□ 0.4
HIF3A-210ENST00000526506 ZNF654Q8IZM8 581 aa17.56■□□□□ 0.4
HIF3A-210ENST00000526506 STAG2Q8N3U4 1231 aa17.56■□□□□ 0.4
HIF3A-210ENST00000526506 SHISA4Q96DD7 197 aa17.56■□□□□ 0.4
HIF3A-210ENST00000526506 A1CFQ9NQ94 594 aaKnown RBP17.56■□□□□ 0.4
HIF3A-210ENST00000526506 MAD2L2Q9UI95 211 aa17.56■□□□□ 0.4
HIF3A-210ENST00000526506 PFASO15067 1338 aa17.55■□□□□ 0.4
HIF3A-210ENST00000526506 CCDC69A6NI79 296 aa17.55■□□□□ 0.4
HIF3A-210ENST00000526506 HMGB1P09429 215 aaKnown RBP17.55■□□□□ 0.4
HIF3A-210ENST00000526506 CAPN2P17655 700 aa17.55■□□□□ 0.4
HIF3A-210ENST00000526506 CCND3P30281 292 aaPredicted RBP17.55■□□□□ 0.4
HIF3A-210ENST00000526506 MUM1L1Q5H9M0 696 aa17.55■□□□□ 0.4
HIF3A-210ENST00000526506 DHX32Q7L7V1 743 aaKnown RBP17.55■□□□□ 0.4
HIF3A-210ENST00000526506 NUP133Q8WUM0 1156 aa17.55■□□□□ 0.4
HIF3A-210ENST00000526506 CYBAP13498 195 aa17.54■□□□□ 0.4
HIF3A-210ENST00000526506 TAL1P17542 331 aaPredicted RBP17.54■□□□□ 0.4
HIF3A-210ENST00000526506 MSL3Q8N5Y2 521 aaKnown RBP17.54■□□□□ 0.4
HIF3A-210ENST00000526506 MAP3K14Q99558 947 aa17.54■□□□□ 0.4
HIF3A-210ENST00000526506 TINF2Q9BSI4 451 aa17.54■□□□□ 0.4
HIF3A-210ENST00000526506 LRRC2Q9BYS8 371 aa17.54■□□□□ 0.4
HIF3A-210ENST00000526506 JMJD4Q9H9V9 463 aa17.54■□□□□ 0.4
HIF3A-210ENST00000526506 VAT1LQ9HCJ6 419 aa17.54■□□□□ 0.4
HIF3A-210ENST00000526506 SNX14Q9Y5W7 946 aa17.54■□□□□ 0.4
HIF3A-210ENST00000526506 POTEB2H3BUK9 544 aa17.53■□□□□ 0.4
HIF3A-210ENST00000526506 TFRCP02786 760 aaKnown RBP17.53■□□□□ 0.4
HIF3A-210ENST00000526506 KIF5BP33176 963 aa17.53■□□□□ 0.4
HIF3A-210ENST00000526506 EXOSC10Q01780 885 aaKnown RBP17.53■□□□□ 0.4
HIF3A-210ENST00000526506 QRICH1Q2TAL8 776 aa17.53■□□□□ 0.4
HIF3A-210ENST00000526506 NSMFQ6X4W1 530 aa17.53■□□□□ 0.4
HIF3A-210ENST00000526506 ZNF467Q7Z7K2 595 aaPredicted RBP17.53■□□□□ 0.4
HIF3A-210ENST00000526506 SGMS1Q86VZ5 419 aa17.53■□□□□ 0.4
HIF3A-210ENST00000526506 CTCFLQ8NI51 663 aaPredicted RBP17.53■□□□□ 0.4
HIF3A-210ENST00000526506 JAKMIP1Q96N16 626 aaKnown RBP17.53■□□□□ 0.4
HIF3A-210ENST00000526506 MYL10Q9BUA6 226 aa17.53■□□□□ 0.4
HIF3A-210ENST00000526506 USP26Q9BXU7 913 aa17.53■□□□□ 0.4
HIF3A-210ENST00000526506 CRISPLD2Q9H0B8 497 aa17.53■□□□□ 0.4
HIF3A-210ENST00000526506 NRBP1Q9UHY1 535 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms