RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 GPHNQ9NQX3 736 aaPredicted RBP23.12■■□□□ 1.29
EXOSC4-202ENST00000525936 WDR19Q8NEZ3 1342 aa23.11■■□□□ 1.29
EXOSC4-202ENST00000525936 SH2B2O14492 632 aaPredicted RBP23.11■■□□□ 1.29
EXOSC4-202ENST00000525936 ICAM1P05362 532 aa23.11■■□□□ 1.29
EXOSC4-202ENST00000525936 PARP1P09874 1014 aaKnown RBP23.11■■□□□ 1.29
EXOSC4-202ENST00000525936 LIFRP42702 1097 aa23.11■■□□□ 1.29
EXOSC4-202ENST00000525936 TKFCQ3LXA3 575 aa23.11■■□□□ 1.29
EXOSC4-202ENST00000525936 TMTC2Q8N394 836 aa23.11■■□□□ 1.29
EXOSC4-202ENST00000525936 MMP19Q99542 508 aa23.11■■□□□ 1.29
EXOSC4-202ENST00000525936 UBA5Q9GZZ9 404 aa23.11■■□□□ 1.29
EXOSC4-202ENST00000525936 FLRT1Q9NZU1 646 aa23.11■■□□□ 1.29
EXOSC4-202ENST00000525936 BIN2Q9UBW5 565 aaPredicted RBP23.11■■□□□ 1.29
EXOSC4-202ENST00000525936 MAD2L2Q9UI95 211 aa23.11■■□□□ 1.29
EXOSC4-202ENST00000525936 ZNFX1Q9P2E3 1918 aaKnown RBP23.11■■□□□ 1.29
EXOSC4-202ENST00000525936 CCL5P13501 91 aa23.1■■□□□ 1.29
EXOSC4-202ENST00000525936 SOX10P56693 466 aa23.1■■□□□ 1.29
EXOSC4-202ENST00000525936 TRIM32Q13049 653 aa23.1■■□□□ 1.29
EXOSC4-202ENST00000525936 KCTD2Q14681 263 aa23.1■■□□□ 1.29
EXOSC4-202ENST00000525936 DPP9Q86TI2 863 aa23.1■■□□□ 1.29
EXOSC4-202ENST00000525936 STAG2Q8N3U4 1231 aa23.1■■□□□ 1.29
EXOSC4-202ENST00000525936 MAP3K14Q99558 947 aa23.1■■□□□ 1.29
EXOSC4-202ENST00000525936 CPVLQ9H3G5 476 aa23.1■■□□□ 1.29
EXOSC4-202ENST00000525936 FBXO40Q9UH90 709 aa23.1■■□□□ 1.29
EXOSC4-202ENST00000525936 SNX14Q9Y5W7 946 aa23.1■■□□□ 1.29
EXOSC4-202ENST00000525936 RBBP6Q7Z6E9 1792 aaKnown RBP23.09■■□□□ 1.29
EXOSC4-202ENST00000525936 DNAJC25-GNG10A0A024R161 153 aa23.09■■□□□ 1.29
EXOSC4-202ENST00000525936 POTEFA5A3E0 1075 aa23.09■■□□□ 1.29
EXOSC4-202ENST00000525936 GRM4Q14833 912 aa23.09■■□□□ 1.29
EXOSC4-202ENST00000525936 ZNF792Q3KQV3 632 aa23.09■■□□□ 1.29
EXOSC4-202ENST00000525936 OLFML2BQ68BL8 750 aa23.09■■□□□ 1.29
EXOSC4-202ENST00000525936 CCDC174Q6PII3 467 aa23.09■■□□□ 1.29
EXOSC4-202ENST00000525936 DHX32Q7L7V1 743 aaKnown RBP23.09■■□□□ 1.29
EXOSC4-202ENST00000525936 UNC93B1Q9H1C4 597 aa23.09■■□□□ 1.29
EXOSC4-202ENST00000525936 DIS3Q9Y2L1 958 aaKnown RBP23.09■■□□□ 1.29
EXOSC4-202ENST00000525936 CATIPQ7Z7H3 387 aa23.08■■□□□ 1.29
EXOSC4-202ENST00000525936 SGMS1Q86VZ5 419 aa23.08■■□□□ 1.29
EXOSC4-202ENST00000525936 ADGRF4Q8IZF3 695 aa23.08■■□□□ 1.29
EXOSC4-202ENST00000525936 PAK6Q9NQU5 681 aaPredicted RBP23.08■■□□□ 1.29
EXOSC4-202ENST00000525936 SLC5A4Q9NY91 659 aa23.08■■□□□ 1.29
EXOSC4-202ENST00000525936 SMCHD1A6NHR9 2005 aa23.08■■□□□ 1.28
EXOSC4-202ENST00000525936 KLRF2D3W0D1 207 aa23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 MYCP01106 439 aaPredicted RBP23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 PGK2P07205 417 aa23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 GJB1P08034 283 aa23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 HMGB1P09429 215 aaKnown RBP23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 CACNB2Q08289 660 aaPredicted RBP23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 SLC35G1Q2M3R5 365 aa23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 MTMR8Q96EF0 704 aa23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 MAML3Q96JK9 1138 aa23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 TRERF1Q96PN7 1200 aa23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 TMEM106CQ9BVX2 250 aa23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 RNF208Q9H0X6 261 aa23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 JMJD4Q9H9V9 463 aa23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 PNMA2Q9UL42 364 aa23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 CCPG1Q9ULG6 757 aa23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 RPTORQ8N122 1335 aa23.07■■□□□ 1.28
EXOSC4-202ENST00000525936 SLC4A3P48751 1232 aa23.06■■□□□ 1.28
EXOSC4-202ENST00000525936 ZNF654Q8IZM8 581 aa23.06■■□□□ 1.28
EXOSC4-202ENST00000525936 LRRC2Q9BYS8 371 aa23.06■■□□□ 1.28
EXOSC4-202ENST00000525936 ACAD9Q9H845 621 aa23.06■■□□□ 1.28
EXOSC4-202ENST00000525936 RNF146Q9NTX7 359 aa23.06■■□□□ 1.28
EXOSC4-202ENST00000525936 MKI67P46013 3256 aaKnown RBP23.06■■□□□ 1.28
EXOSC4-202ENST00000525936 DDAH1O94760 285 aa23.05■■□□□ 1.28
EXOSC4-202ENST00000525936 ALAS1P13196 640 aa23.05■■□□□ 1.28
EXOSC4-202ENST00000525936 PRKAR2AP13861 404 aaKnown RBP23.05■■□□□ 1.28
EXOSC4-202ENST00000525936 MUM1L1Q5H9M0 696 aa23.05■■□□□ 1.28
EXOSC4-202ENST00000525936 RIOX1Q9H6W3 641 aa23.05■■□□□ 1.28
EXOSC4-202ENST00000525936 HOMER2Q9NSB8 354 aa23.05■■□□□ 1.28
EXOSC4-202ENST00000525936 GJA8P48165 433 aa23.04■■□□□ 1.28
EXOSC4-202ENST00000525936 MFSD14CQ5VZR4 134 aa23.04■■□□□ 1.28
EXOSC4-202ENST00000525936 ANKRD35Q8N283 1001 aa23.04■■□□□ 1.28
EXOSC4-202ENST00000525936 FBXL16Q8N461 479 aa23.04■■□□□ 1.28
EXOSC4-202ENST00000525936 DDX11Q96FC9 970 aa23.04■■□□□ 1.28
EXOSC4-202ENST00000525936 HMX1Q9NP08 348 aaPredicted RBP23.04■■□□□ 1.28
EXOSC4-202ENST00000525936 A1CFQ9NQ94 594 aaKnown RBP23.04■■□□□ 1.28
EXOSC4-202ENST00000525936 CYTH3O43739 400 aa23.03■■□□□ 1.28
EXOSC4-202ENST00000525936 TAL1P17542 331 aaPredicted RBP23.03■■□□□ 1.28
EXOSC4-202ENST00000525936 EN2P19622 333 aaPredicted RBP23.03■■□□□ 1.28
EXOSC4-202ENST00000525936 CYP2C19P33261 490 aa23.03■■□□□ 1.28
EXOSC4-202ENST00000525936 CDC37Q16543 378 aaPredicted RBP23.03■■□□□ 1.28
EXOSC4-202ENST00000525936 FAM133AQ8N9E0 248 aa23.03■■□□□ 1.28
EXOSC4-202ENST00000525936 CLEC4DQ8WXI8 215 aa23.03■■□□□ 1.28
EXOSC4-202ENST00000525936 FGD4Q96M96 766 aa23.03■■□□□ 1.28
EXOSC4-202ENST00000525936 JAKMIP1Q96N16 626 aaKnown RBP23.03■■□□□ 1.28
EXOSC4-202ENST00000525936 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.03■■□□□ 1.282e-7■■■■□ 23.4
EXOSC4-202ENST00000525936 CCDC69A6NI79 296 aa23.02■■□□□ 1.28
EXOSC4-202ENST00000525936 SGPL1O95470 568 aa23.02■■□□□ 1.28
EXOSC4-202ENST00000525936 SMARCA1P28370 1054 aa23.02■■□□□ 1.28
EXOSC4-202ENST00000525936 QRICH1Q2TAL8 776 aa23.02■■□□□ 1.28
EXOSC4-202ENST00000525936 MAMDC4Q6UXC1 1216 aa23.02■■□□□ 1.28
EXOSC4-202ENST00000525936 ZNF467Q7Z7K2 595 aaPredicted RBP23.02■■□□□ 1.28
EXOSC4-202ENST00000525936 MSL3Q8N5Y2 521 aaKnown RBP23.02■■□□□ 1.28
EXOSC4-202ENST00000525936 TCEANC2Q96MN5 208 aa23.02■■□□□ 1.28
EXOSC4-202ENST00000525936 TINF2Q9BSI4 451 aa23.02■■□□□ 1.28
EXOSC4-202ENST00000525936 MYL10Q9BUA6 226 aa23.02■■□□□ 1.28
EXOSC4-202ENST00000525936 CRISPLD2Q9H0B8 497 aa23.02■■□□□ 1.28
EXOSC4-202ENST00000525936 CYP39A1Q9NYL5 469 aa23.02■■□□□ 1.28
EXOSC4-202ENST00000525936 PLXNA1Q9UIW2 1896 aa23.02■■□□□ 1.28
EXOSC4-202ENST00000525936 TNRC18O15417 2968 aaPredicted RBP23.01■■□□□ 1.27
EXOSC4-202ENST00000525936 CALM1P0DP23 149 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms