RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 FBXW4P57775 412 aa14.92□□□□□ -0.02
LRRK1-202ENST00000525284 RNF207Q6ZRF8 634 aa14.92□□□□□ -0.02
LRRK1-202ENST00000525284 ZC3H18Q86VM9 953 aaKnown RBP14.92□□□□□ -0.02
LRRK1-202ENST00000525284 ACRBPQ8NEB7 543 aa14.92□□□□□ -0.02
LRRK1-202ENST00000525284 DBNLQ9UJU6 430 aaKnown RBP14.92□□□□□ -0.02
LRRK1-202ENST00000525284 V9GY48 417 aaPredicted RBP14.92□□□□□ -0.02
LRRK1-202ENST00000525284 DEXIO95424 95 aa14.92□□□□□ -0.02
LRRK1-202ENST00000525284 YWHAEP62258 255 aaKnown RBP14.92□□□□□ -0.02
LRRK1-202ENST00000525284 TMOD4Q9NZQ9 345 aa14.92□□□□□ -0.02
LRRK1-202ENST00000525284 HNRNPCP07910 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
LRRK1-202ENST00000525284 SNRPA1P09661 255 aaKnown RBP14.92□□□□□ -0.02
LRRK1-202ENST00000525284 DNM2P50570 870 aa14.92□□□□□ -0.02
LRRK1-202ENST00000525284 CCDC84Q86UT8 332 aaPredicted RBP14.92□□□□□ -0.02
LRRK1-202ENST00000525284 NLRP3Q96P20 1036 aa14.92□□□□□ -0.02
LRRK1-202ENST00000525284 B4E1Z4 1266 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 SGK1O00141 431 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 CUTAO60888 179 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 FAM173BQ6P4H8 233 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 ARMC9Q7Z3E5 817 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 TMCO5AQ8N6Q1 288 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 GDAP1Q8TB36 358 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 UBN1Q9NPG3 1134 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 COPG1Q9Y678 874 aaKnown RBP14.91□□□□□ -0.02
LRRK1-202ENST00000525284 M0QZ92 97 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 RINT1Q6NUQ1 792 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 CCDC90BQ9GZT6 254 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 COG4Q9H9E3 785 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 SNAPC4Q5SXM2 1469 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 LDHBP07195 334 aaKnown RBP14.91□□□□□ -0.02
LRRK1-202ENST00000525284 RNF169Q8NCN4 708 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 CDV3Q9UKY7 258 aaKnown RBP14.91□□□□□ -0.02
LRRK1-202ENST00000525284 PASKQ96RG2 1323 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 NBNO60934 754 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 HOOK2Q96ED9 719 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 TRAIPQ9BWF2 469 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 CCDC61Q9Y6R9 512 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 UNC13AQ9UPW8 1703 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 WDR91A4D1P6 747 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 DKC1O60832 514 aaKnown RBP eCLIP14.91□□□□□ -0.02
LRRK1-202ENST00000525284 HSPA8P11142 646 aaKnown RBP14.91□□□□□ -0.02
LRRK1-202ENST00000525284 MRPL28Q13084 256 aaKnown RBP14.91□□□□□ -0.02
LRRK1-202ENST00000525284 HABP4Q5JVS0 413 aaKnown RBP14.91□□□□□ -0.02
LRRK1-202ENST00000525284 NBPF14Q5TI25 921 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 OTUD7BQ6GQQ9 843 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 TEX9Q8N6V9 391 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 XPO4Q9C0E2 1151 aaKnown RBP14.91□□□□□ -0.02
LRRK1-202ENST00000525284 STRIP2Q9ULQ0 834 aa14.91□□□□□ -0.02
LRRK1-202ENST00000525284 FNDC3AQ9Y2H6 1198 aaKnown RBP14.91□□□□□ -0.02
LRRK1-202ENST00000525284 MSH2P43246 934 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 XAGE3Q8WTP9 111 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 DDX17Q92841 729 aaKnown RBP14.9□□□□□ -0.02
LRRK1-202ENST00000525284 SEC31AO94979 1220 aaKnown RBP14.9□□□□□ -0.02
LRRK1-202ENST00000525284 TTC30BQ8N4P2 665 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 NCLNQ969V3 563 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 INTS4Q96HW7 963 aaKnown RBP14.9□□□□□ -0.02
LRRK1-202ENST00000525284 PNMA2Q9UL42 364 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 BICRAQ9NZM4 1560 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 TADA3O75528 432 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 CABP7Q86V35 215 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 ANKLE2Q86XL3 938 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 ENOX1Q8TC92 643 aaKnown RBP14.9□□□□□ -0.02
LRRK1-202ENST00000525284 GIPC2Q8TF65 315 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 JRKLQ9Y4A0 524 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 CAMSAP2Q08AD1 1489 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 DDIT3P35638 169 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 HDAC1Q13547 482 aaPredicted RBP14.9□□□□□ -0.02
LRRK1-202ENST00000525284 USH1GQ495M9 461 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 PDXDC1Q6P996 788 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 BBOF1Q8ND07 529 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 ZCRB1Q8TBF4 217 aaKnown RBP14.9□□□□□ -0.02
LRRK1-202ENST00000525284 INPP5FQ9Y2H2 1132 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 EFCAB8A8MWE9 144 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 PNOCQ13519 176 aa14.9□□□□□ -0.02
LRRK1-202ENST00000525284 PUM3Q15397 648 aaKnown RBP14.9□□□□□ -0.02
LRRK1-202ENST00000525284 RYBPQ8N488 228 aaPredicted RBP14.9□□□□□ -0.02
LRRK1-202ENST00000525284 NCOA5Q9HCD5 579 aaKnown RBP14.9□□□□□ -0.02
LRRK1-202ENST00000525284 RFX6Q8HWS3 928 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 ZC3H12CQ9C0D7 883 aaKnown RBP14.89□□□□□ -0.03
LRRK1-202ENST00000525284 ING2Q9H160 280 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 ZNF229Q9UJW7 825 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 E2F6O75461 281 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 PPP2R5EQ16537 467 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 CALCRLQ16602 461 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 HIBCHQ6NVY1 386 aaPredicted RBP14.89□□□□□ -0.03
LRRK1-202ENST00000525284 FAM180AQ6UWF9 173 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 IFNL2Q8IZJ0 200 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 CSRNP1Q96S65 589 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 SERPINI1Q99574 410 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 UPF3AQ9H1J1 476 aaKnown RBP14.89□□□□□ -0.03
LRRK1-202ENST00000525284 FAM95CA0A1B0GW59 222 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 XPAP23025 273 aaPredicted RBP14.89□□□□□ -0.03
LRRK1-202ENST00000525284 FLCNQ8NFG4 579 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 ALKBH8Q96BT7 664 aaKnown RBP14.89□□□□□ -0.03
LRRK1-202ENST00000525284 SAAL1Q96ER3 474 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 ZFYVE19Q96K21 471 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 TBK1Q9UHD2 729 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 DAB1O75553 588 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 MBD4O95243 580 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 KRT4P19013 534 aa14.89□□□□□ -0.03
LRRK1-202ENST00000525284 HIF1AQ16665 826 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms