RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CNNM2Q9H8M5 875 aa15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 RNF146Q9NTX7 359 aa15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 TAF6LQ9Y6J9 622 aa15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 FRMPD3Q5JV73 1810 aa15.08■□□□□ 0.01
TRAPPC4-205ENST00000525079 DNAJC25-GNG10A0A024R161 153 aa15.08■□□□□ 0
TRAPPC4-205ENST00000525079 H0YGN5 161 aa15.08■□□□□ 0
TRAPPC4-205ENST00000525079 CCDC178Q5BJE1 867 aa15.08■□□□□ 0
TRAPPC4-205ENST00000525079 MUM1L1Q5H9M0 696 aa15.08■□□□□ 0
TRAPPC4-205ENST00000525079 BTNL9Q6UXG8 535 aa15.08■□□□□ 0
TRAPPC4-205ENST00000525079 ENAHQ8N8S7 591 aaPredicted RBP15.08■□□□□ 0
TRAPPC4-205ENST00000525079 PNMA1Q8ND90 353 aa15.08■□□□□ 0
TRAPPC4-205ENST00000525079 TRERF1Q96PN7 1200 aa15.08■□□□□ 0
TRAPPC4-205ENST00000525079 UBAC1Q9BSL1 405 aa15.08■□□□□ 0
TRAPPC4-205ENST00000525079 CPVLQ9H3G5 476 aa15.08■□□□□ 0
TRAPPC4-205ENST00000525079 C11orf49Q9H6J7 331 aa15.08■□□□□ 0
TRAPPC4-205ENST00000525079 FBXO40Q9UH90 709 aa15.08■□□□□ 0
TRAPPC4-205ENST00000525079 DIS3Q9Y2L1 958 aaKnown RBP15.08■□□□□ 0
TRAPPC4-205ENST00000525079 TNKSO95271 1327 aa15.08■□□□□ 0
TRAPPC4-205ENST00000525079 MYCNP04198 464 aaPredicted RBP15.07■□□□□ 0
TRAPPC4-205ENST00000525079 SNHG28P0DPA3 235 aa15.07■□□□□ 0
TRAPPC4-205ENST00000525079 CNTN2Q02246 1040 aa15.07■□□□□ 0
TRAPPC4-205ENST00000525079 KIAA1211Q6ZU35 1233 aa15.07■□□□□ 0
TRAPPC4-205ENST00000525079 ANKS1AQ92625 1134 aa15.07■□□□□ 0
TRAPPC4-205ENST00000525079 MAP4K1Q92918 833 aa15.07■□□□□ 0
TRAPPC4-205ENST00000525079 UBA5Q9GZZ9 404 aa15.07■□□□□ 0
TRAPPC4-205ENST00000525079 RANBP17Q9H2T7 1088 aaKnown RBP15.07■□□□□ 0
TRAPPC4-205ENST00000525079 ACAD9Q9H845 621 aa15.07■□□□□ 0
TRAPPC4-205ENST00000525079 CCPG1Q9ULG6 757 aa15.07■□□□□ 0
TRAPPC4-205ENST00000525079 RBM8AQ9Y5S9 174 aaKnown RBP15.07■□□□□ 0
TRAPPC4-205ENST00000525079 E7EWF7 191 aa15.06■□□□□ 0
TRAPPC4-205ENST00000525079 SEPT4O43236 478 aa15.06■□□□□ 0
TRAPPC4-205ENST00000525079 EVI5O60447 810 aa15.06■□□□□ 0
TRAPPC4-205ENST00000525079 TRDNQ13061 729 aa15.06■□□□□ 0
TRAPPC4-205ENST00000525079 TKFCQ3LXA3 575 aa15.06■□□□□ 0
TRAPPC4-205ENST00000525079 GJC2Q5T442 439 aaPredicted RBP15.06■□□□□ 0
TRAPPC4-205ENST00000525079 STOX1Q6ZVD7 989 aa15.06■□□□□ 0
TRAPPC4-205ENST00000525079 CHST3Q7LGC8 479 aa15.06■□□□□ 0
TRAPPC4-205ENST00000525079 ESYT1Q9BSJ8 1104 aa15.06■□□□□ 0
TRAPPC4-205ENST00000525079 A1CFQ9NQ94 594 aaKnown RBP15.06■□□□□ 0
TRAPPC4-205ENST00000525079 POTEB2H3BUK9 544 aa15.05■□□□□ -0
TRAPPC4-205ENST00000525079 MSCO60682 206 aa15.05■□□□□ -0
TRAPPC4-205ENST00000525079 SNAI1O95863 264 aaPredicted RBP15.05■□□□□ -0
TRAPPC4-205ENST00000525079 ICAM1P05362 532 aa15.05■□□□□ -0
TRAPPC4-205ENST00000525079 NEFLP07196 543 aa15.05■□□□□ -0
TRAPPC4-205ENST00000525079 NT5C2P49902 561 aa15.05■□□□□ -0
TRAPPC4-205ENST00000525079 BMP2KLQ5H9B9 411 aa15.05■□□□□ -0
TRAPPC4-205ENST00000525079 IFIT1BQ5T764 474 aaKnown RBP15.05■□□□□ -0
TRAPPC4-205ENST00000525079 NSMFQ6X4W1 530 aa15.05■□□□□ -0
TRAPPC4-205ENST00000525079 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.05■□□□□ -0
TRAPPC4-205ENST00000525079 FGD4Q96M96 766 aa15.05■□□□□ -0
TRAPPC4-205ENST00000525079 LSG1Q9H089 658 aaKnown RBP15.05■□□□□ -0
TRAPPC4-205ENST00000525079 PFASO15067 1338 aa15.05■□□□□ -0
TRAPPC4-205ENST00000525079 ALPK3Q96L96 1907 aa15.05■□□□□ -0
TRAPPC4-205ENST00000525079 SMCHD1A6NHR9 2005 aa15.05■□□□□ -0
TRAPPC4-205ENST00000525079 MKI67P46013 3256 aaKnown RBP15.05■□□□□ -0
TRAPPC4-205ENST00000525079 SOWAHBA6NEL2 793 aa15.04■□□□□ -0
TRAPPC4-205ENST00000525079 ZNF865P0CJ78 1059 aaPredicted RBP15.04■□□□□ -0
TRAPPC4-205ENST00000525079 COL6A1P12109 1028 aa15.04■□□□□ -0
TRAPPC4-205ENST00000525079 SEC23AQ15436 765 aa15.04■□□□□ -0
TRAPPC4-205ENST00000525079 GPATCH4Q5T3I0 446 aaKnown RBP15.04■□□□□ -0
TRAPPC4-205ENST00000525079 RALYLQ86SE5 291 aaKnown RBP15.04■□□□□ -0
TRAPPC4-205ENST00000525079 C7orf61Q8IZ16 206 aa15.04■□□□□ -0
TRAPPC4-205ENST00000525079 NCOA7Q8NI08 942 aa15.04■□□□□ -0
TRAPPC4-205ENST00000525079 LENG1Q96BZ8 264 aaPredicted RBP15.04■□□□□ -0
TRAPPC4-205ENST00000525079 PURBQ96QR8 312 aaKnown RBP15.04■□□□□ -0
TRAPPC4-205ENST00000525079 SENP6Q9GZR1 1112 aaPredicted RBP15.04■□□□□ -0
TRAPPC4-205ENST00000525079 SENP2Q9HC62 589 aa15.04■□□□□ -0
TRAPPC4-205ENST00000525079 ZHX1Q9UKY1 873 aaPredicted RBP15.04■□□□□ -0
TRAPPC4-205ENST00000525079 CNPY2Q9Y2B0 182 aa15.04■□□□□ -0
TRAPPC4-205ENST00000525079 NR2E3Q9Y5X4 410 aa15.04■□□□□ -0
TRAPPC4-205ENST00000525079 DDX49Q9Y6V7 483 aaKnown RBP15.04■□□□□ -0
TRAPPC4-205ENST00000525079 IFIT3O14879 490 aaKnown RBP15.03■□□□□ -0
TRAPPC4-205ENST00000525079 MAMDC4Q6UXC1 1216 aa15.03■□□□□ -0
TRAPPC4-205ENST00000525079 FAM133AQ8N9E0 248 aa15.03■□□□□ -0
TRAPPC4-205ENST00000525079 VAT1LQ9HCJ6 419 aa15.03■□□□□ -0
TRAPPC4-205ENST00000525079 ANO2Q9NQ90 1003 aa15.03■□□□□ -0
TRAPPC4-205ENST00000525079 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.03■□□□□ -0
TRAPPC4-205ENST00000525079 CYP39A1Q9NYL5 469 aa15.03■□□□□ -0
TRAPPC4-205ENST00000525079 SYNGAP1Q96PV0 1343 aa15.02■□□□□ -0
TRAPPC4-205ENST00000525079 NFIBO00712 420 aa15.02■□□□□ -0
TRAPPC4-205ENST00000525079 DHX16O60231 1041 aaKnown RBP15.02■□□□□ -0
TRAPPC4-205ENST00000525079 PARP1P09874 1014 aaKnown RBP15.02■□□□□ -0
TRAPPC4-205ENST00000525079 ATN1P54259 1190 aaPredicted RBP15.02■□□□□ -0
TRAPPC4-205ENST00000525079 LRRC26Q2I0M4 334 aa15.02■□□□□ -0
TRAPPC4-205ENST00000525079 USH1GQ495M9 461 aa15.02■□□□□ -0
TRAPPC4-205ENST00000525079 ASPRV1Q53RT3 343 aa15.02■□□□□ -0
TRAPPC4-205ENST00000525079 ARMCX2Q7L311 632 aa15.02■□□□□ -0
TRAPPC4-205ENST00000525079 ZNF467Q7Z7K2 595 aaPredicted RBP15.02■□□□□ -0
TRAPPC4-205ENST00000525079 CCDC144CPQ8IYA2 1237 aa15.02■□□□□ -0
TRAPPC4-205ENST00000525079 ADGRF4Q8IZF3 695 aa15.02■□□□□ -0
TRAPPC4-205ENST00000525079 STAG2Q8N3U4 1231 aa15.02■□□□□ -0
TRAPPC4-205ENST00000525079 MSL3Q8N5Y2 521 aaKnown RBP15.02■□□□□ -0
TRAPPC4-205ENST00000525079 ARRDC4Q8NCT1 418 aa15.02■□□□□ -0
TRAPPC4-205ENST00000525079 PCDH10Q9P2E7 1040 aa15.02■□□□□ -0
TRAPPC4-205ENST00000525079 NRBP1Q9UHY1 535 aa15.02■□□□□ -0
TRAPPC4-205ENST00000525079 ASTN1O14525 1302 aa15.01□□□□□ -0.01
TRAPPC4-205ENST00000525079 ERICH2A1L162 156 aa15.01□□□□□ -0.01
TRAPPC4-205ENST00000525079 PTPDC1A2A3K4 754 aa15.01□□□□□ -0.01
TRAPPC4-205ENST00000525079 DNM1LO00429 736 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms