RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 UBE2Q2LH0YL09 131 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 RXRAP19793 462 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 CARSP49589 748 aaKnown RBP11.33□□□□□ -0.6
SPIDR-224ENST00000524126 NT5DC1Q5TFE4 455 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 KRT40Q6A162 431 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 RPUSD2Q8IZ73 545 aaKnown RBP11.33□□□□□ -0.6
SPIDR-224ENST00000524126 TRIM58Q8NG06 486 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 AGAP11Q8TF27 550 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 ATP6V1G3Q96LB4 118 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 DBNLQ9UJU6 430 aaKnown RBP11.33□□□□□ -0.6
SPIDR-224ENST00000524126 KAT6BQ8WYB5 2073 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 CPDO75976 1380 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 GNAT1P11488 350 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 RANBP1P43487 201 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 AFMP43652 599 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 PDCD2Q16342 344 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-224ENST00000524126 CWF19L1Q69YN2 538 aaKnown RBP11.33□□□□□ -0.6
SPIDR-224ENST00000524126 SLC30A9Q6PML9 568 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 MAEAQ7L5Y9 396 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 IQCKQ8N0W5 287 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 SPATA4Q8NEY3 305 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 IFT81Q8WYA0 676 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 CAVIN3Q969G5 261 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 ALG1Q9BT22 464 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 STIM2Q9P246 746 aa11.33□□□□□ -0.6
SPIDR-224ENST00000524126 CORO1CQ9ULV4 474 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-224ENST00000524126 ERICH2A1L162 156 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 PHF20L1A8MW92 1017 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 DNAJC8O75937 253 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-224ENST00000524126 RTN3O95197 1032 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-224ENST00000524126 PYGBP11216 843 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 ERCC5P28715 1186 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-224ENST00000524126 ABL2P42684 1182 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 CUL4BQ13620 913 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 LAMB3Q13751 1172 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 AMOTQ4VCS5 1084 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 CHADLQ6NUI6 762 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 MAATS1Q7Z4T9 603 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 KRI1Q8N9T8 703 aaKnown RBP11.32□□□□□ -0.6
SPIDR-224ENST00000524126 KLHL23Q8NBE8 558 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 PANK4Q9NVE7 773 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 CTNND2Q9UQB3 1225 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 MAP3K2Q9Y2U5 619 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 ITIH6Q6UXX5 1313 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 CACNA1FO60840 1977 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 PALLDQ8WX93 1383 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 EVA1CP58658 441 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 LACTB2Q53H82 288 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-224ENST00000524126 NFRKBQ6P4R8 1299 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 TBC1D1Q86TI0 1168 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-224ENST00000524126 CACNA2D3Q8IZS8 1091 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 CCT6BQ92526 530 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 EZH1Q92800 747 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-224ENST00000524126 PHKBQ93100 1093 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.32□□□□□ -0.67e-6■■■■□ 20.5
SPIDR-224ENST00000524126 WDR17Q8IZU2 1322 aa11.32□□□□□ -0.6
SPIDR-224ENST00000524126 TTC26A0AVF1 554 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 SPDYE3A6NKU9 549 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 AHCYL1O43865 530 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 FESP07332 822 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 PAPOLAP51003 745 aaKnown RBP11.31□□□□□ -0.6
SPIDR-224ENST00000524126 CYP27A1Q02318 531 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 TRADDQ15628 312 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 IQCEQ6IPM2 695 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 OR2W6PQ8NHA6 318 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-224ENST00000524126 PIDD1Q9HB75 910 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 SLC5A4Q9NY91 659 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 KDM3BQ7LBC6 1761 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 ACTN4O43707 911 aaKnown RBP11.31□□□□□ -0.6
SPIDR-224ENST00000524126 FAM163BP0C2L3 166 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 HSPD1P10809 573 aaKnown RBP11.31□□□□□ -0.6
SPIDR-224ENST00000524126 NEFHP12036 1026 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 KCTD19Q17RG1 926 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-224ENST00000524126 WDR59Q6PJI9 974 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 SPICE1Q8N0Z3 855 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 B4GALNT2Q8NHY0 566 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 PRCCQ92733 491 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-224ENST00000524126 CTAGE1Q96RT6 745 aa11.31□□□□□ -0.6
SPIDR-224ENST00000524126 PPIP5K2O43314 1243 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 TRAPPC3O43617 180 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 GLI1P08151 1106 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 COPB1P53618 953 aaKnown RBP11.3□□□□□ -0.6
SPIDR-224ENST00000524126 EMC10Q5UCC4 262 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 PPP4R3AQ6IN85 833 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 CCDC63Q8NA47 563 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 EPAS1Q99814 870 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 DBNDD2Q9BQY9 259 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 PICK1Q9NRD5 415 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 PAPOLBQ9NRJ5 636 aaKnown RBP11.3□□□□□ -0.6
SPIDR-224ENST00000524126 RBM12Q9NTZ6 932 aaKnown RBP11.3□□□□□ -0.6
SPIDR-224ENST00000524126 CNOT8Q9UFF9 292 aaKnown RBP11.3□□□□□ -0.6
SPIDR-224ENST00000524126 SNX12Q9UMY4 172 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 PLAAQ9Y263 795 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 NCK2O43639 380 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 PRC1O43663 620 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 KRT86O43790 486 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 COQ9O75208 318 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 LGR5O75473 907 aa11.3□□□□□ -0.6
SPIDR-224ENST00000524126 ATP4AP20648 1035 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms