RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 PCP11498 1178 aaKnown RBP22.03■■□□□ 1.12
SPIDR-220ENST00000522900 FXR1P51114 621 aaKnown RBP eCLIP22.03■■□□□ 1.12
SPIDR-220ENST00000522900 RNF41Q9H4P4 317 aaPredicted RBP22.03■■□□□ 1.12
SPIDR-220ENST00000522900 GPCPD1Q9NPB8 672 aa22.03■■□□□ 1.12
SPIDR-220ENST00000522900 FBXO40Q9UH90 709 aa22.03■■□□□ 1.12
SPIDR-220ENST00000522900 NRBP1Q9UHY1 535 aa22.03■■□□□ 1.12
SPIDR-220ENST00000522900 ATN1P54259 1190 aaPredicted RBP22.02■■□□□ 1.12
SPIDR-220ENST00000522900 CNTN2Q02246 1040 aa22.02■■□□□ 1.12
SPIDR-220ENST00000522900 MAMDC4Q6UXC1 1216 aa22.02■■□□□ 1.12
SPIDR-220ENST00000522900 ARRDC4Q8NCT1 418 aa22.02■■□□□ 1.12
SPIDR-220ENST00000522900 ESR2Q92731 530 aa22.02■■□□□ 1.12
SPIDR-220ENST00000522900 TTC14Q96N46 770 aa22.02■■□□□ 1.12
SPIDR-220ENST00000522900 RNF146Q9NTX7 359 aa22.02■■□□□ 1.12
SPIDR-220ENST00000522900 KDM4AO75164 1064 aa22.01■■□□□ 1.11
SPIDR-220ENST00000522900 ALAS1P13196 640 aa22.01■■□□□ 1.11
SPIDR-220ENST00000522900 LRRC41Q15345 812 aa22.01■■□□□ 1.11
SPIDR-220ENST00000522900 MUM1L1Q5H9M0 696 aa22.01■■□□□ 1.11
SPIDR-220ENST00000522900 BTNL9Q6UXG8 535 aa22.01■■□□□ 1.11
SPIDR-220ENST00000522900 LENG1Q96BZ8 264 aaPredicted RBP22.01■■□□□ 1.11
SPIDR-220ENST00000522900 TRERF1Q96PN7 1200 aa22.01■■□□□ 1.11
SPIDR-220ENST00000522900 ACAD9Q9H845 621 aa22.01■■□□□ 1.11
SPIDR-220ENST00000522900 B4E1Z4 1266 aa22■■□□□ 1.11
SPIDR-220ENST00000522900 PDHBP11177 359 aa22■■□□□ 1.11
SPIDR-220ENST00000522900 ZNF467Q7Z7K2 595 aaPredicted RBP22■■□□□ 1.11
SPIDR-220ENST00000522900 MSL3Q8N5Y2 521 aaKnown RBP22■■□□□ 1.11
SPIDR-220ENST00000522900 A1CFQ9NQ94 594 aaKnown RBP22■■□□□ 1.11
SPIDR-220ENST00000522900 CNPY2Q9Y2B0 182 aa22■■□□□ 1.11
SPIDR-220ENST00000522900 FRMPD3Q5JV73 1810 aa22■■□□□ 1.11
SPIDR-220ENST00000522900 SYNGAP1Q96PV0 1343 aa22■■□□□ 1.11
SPIDR-220ENST00000522900 PGK1P00558 417 aa21.99■■□□□ 1.11
SPIDR-220ENST00000522900 RARBP10826 455 aa21.99■■□□□ 1.11
SPIDR-220ENST00000522900 CHMLP26374 656 aa21.99■■□□□ 1.11
SPIDR-220ENST00000522900 IMMTQ16891 758 aaKnown RBP21.99■■□□□ 1.11
SPIDR-220ENST00000522900 TKFCQ3LXA3 575 aa21.99■■□□□ 1.11
SPIDR-220ENST00000522900 SYDE2Q5VT97 1194 aa21.99■■□□□ 1.11
SPIDR-220ENST00000522900 GDF15Q99988 308 aa21.99■■□□□ 1.11
SPIDR-220ENST00000522900 RANBP17Q9H2T7 1088 aaKnown RBP21.99■■□□□ 1.11
SPIDR-220ENST00000522900 XPNPEP3Q9NQH7 507 aa21.99■■□□□ 1.11
SPIDR-220ENST00000522900 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.99■■□□□ 1.11
SPIDR-220ENST00000522900 ZSWIM5Q9P217 1185 aa21.99■■□□□ 1.11
SPIDR-220ENST00000522900 CTNNA3Q9UI47 895 aa21.99■■□□□ 1.11
SPIDR-220ENST00000522900 ZHX1Q9UKY1 873 aaPredicted RBP21.99■■□□□ 1.11
SPIDR-220ENST00000522900 DNAH12Q6ZR08 3092 aa21.99■■□□□ 1.11
SPIDR-220ENST00000522900 SOWAHBA6NEL2 793 aa21.98■■□□□ 1.11
SPIDR-220ENST00000522900 KBTBD13C9JR72 458 aa21.98■■□□□ 1.11
SPIDR-220ENST00000522900 SNHG28P0DPA3 235 aa21.98■■□□□ 1.11
SPIDR-220ENST00000522900 AKR1A1P14550 325 aa21.98■■□□□ 1.11
SPIDR-220ENST00000522900 ADCYAP1R1P41586 468 aa21.98■■□□□ 1.11
SPIDR-220ENST00000522900 ZNF543Q08ER8 600 aa21.98■■□□□ 1.11
SPIDR-220ENST00000522900 DGKHQ86XP1 1220 aa21.98■■□□□ 1.11
SPIDR-220ENST00000522900 FAM133AQ8N9E0 248 aa21.98■■□□□ 1.11
SPIDR-220ENST00000522900 FERMT2Q96AC1 680 aa21.98■■□□□ 1.11
SPIDR-220ENST00000522900 CCPG1Q9ULG6 757 aa21.98■■□□□ 1.11
SPIDR-220ENST00000522900 PLXNA1Q9UIW2 1896 aa21.97■■□□□ 1.11
SPIDR-220ENST00000522900 POTEB2H3BUK9 544 aa21.97■■□□□ 1.11
SPIDR-220ENST00000522900 ICAM1P05362 532 aa21.97■■□□□ 1.11
SPIDR-220ENST00000522900 GOLGA8HP0CJ92 632 aa21.97■■□□□ 1.11
SPIDR-220ENST00000522900 PTH1RQ03431 593 aa21.97■■□□□ 1.11
SPIDR-220ENST00000522900 ACVR2BQ13705 512 aa21.97■■□□□ 1.11
SPIDR-220ENST00000522900 SLC39A5Q6ZMH5 540 aa21.97■■□□□ 1.11
SPIDR-220ENST00000522900 ARMCX2Q7L311 632 aa21.97■■□□□ 1.11
SPIDR-220ENST00000522900 CCDC144CPQ8IYA2 1237 aa21.97■■□□□ 1.11
SPIDR-220ENST00000522900 PURBQ96QR8 312 aaKnown RBP21.97■■□□□ 1.11
SPIDR-220ENST00000522900 FAM184BQ9ULE4 1060 aa21.97■■□□□ 1.11
SPIDR-220ENST00000522900 DDX49Q9Y6V7 483 aaKnown RBP21.97■■□□□ 1.11
SPIDR-220ENST00000522900 MAGEA10P43363 369 aaPredicted RBP21.96■■□□□ 1.11
SPIDR-220ENST00000522900 ZSCAN10Q96SZ4 725 aaPredicted RBP21.96■■□□□ 1.11
SPIDR-220ENST00000522900 CPVLQ9H3G5 476 aa21.96■■□□□ 1.11
SPIDR-220ENST00000522900 ASTN1O14525 1302 aa21.96■■□□□ 1.11
SPIDR-220ENST00000522900 ADCY6O43306 1168 aa21.95■■□□□ 1.1
SPIDR-220ENST00000522900 RTP1P59025 263 aa21.95■■□□□ 1.1
SPIDR-220ENST00000522900 IRX5P78411 483 aaPredicted RBP21.95■■□□□ 1.1
SPIDR-220ENST00000522900 IQCA1Q86XH1 822 aa21.95■■□□□ 1.1
SPIDR-220ENST00000522900 ANKS1AQ92625 1134 aa21.95■■□□□ 1.1
SPIDR-220ENST00000522900 UBA5Q9GZZ9 404 aa21.95■■□□□ 1.1
SPIDR-220ENST00000522900 KATNBL1Q9H079 304 aa21.95■■□□□ 1.1
SPIDR-220ENST00000522900 CYP39A1Q9NYL5 469 aa21.95■■□□□ 1.1
SPIDR-220ENST00000522900 ADAMTS4O75173 837 aa21.94■■□□□ 1.1
SPIDR-220ENST00000522900 NSMFQ6X4W1 530 aa21.94■■□□□ 1.1
SPIDR-220ENST00000522900 ENAHQ8N8S7 591 aaPredicted RBP21.94■■□□□ 1.1
SPIDR-220ENST00000522900 PNMA1Q8ND90 353 aa21.94■■□□□ 1.1
SPIDR-220ENST00000522900 RUFY2Q8WXA3 655 aa21.94■■□□□ 1.1
SPIDR-220ENST00000522900 KRT23Q9C075 422 aa21.94■■□□□ 1.1
SPIDR-220ENST00000522900 ABHD16BQ9H3Z7 469 aa21.94■■□□□ 1.1
SPIDR-220ENST00000522900 PHF24Q9UPV7 400 aa21.94■■□□□ 1.1
SPIDR-220ENST00000522900 ATP11BQ9Y2G3 1177 aa21.94■■□□□ 1.1
SPIDR-220ENST00000522900 RAD50Q92878 1312 aa21.94■■□□□ 1.1
SPIDR-220ENST00000522900 RANBP2P49792 3224 aaKnown RBP21.94■■□□□ 1.1
SPIDR-220ENST00000522900 SMCHD1A6NHR9 2005 aa21.94■■□□□ 1.1
SPIDR-220ENST00000522900 BMP8BP34820 402 aa21.93■■□□□ 1.1
SPIDR-220ENST00000522900 NT5C2P49902 561 aa21.93■■□□□ 1.1
SPIDR-220ENST00000522900 CCDC144BQ3MJ40 725 aa21.93■■□□□ 1.1
SPIDR-220ENST00000522900 CCDC178Q5BJE1 867 aa21.93■■□□□ 1.1
SPIDR-220ENST00000522900 CYB5R4Q7L1T6 521 aa21.93■■□□□ 1.1
SPIDR-220ENST00000522900 RNF180Q86T96 592 aa21.93■■□□□ 1.1
SPIDR-220ENST00000522900 SKAP1Q86WV1 359 aa21.93■■□□□ 1.1
SPIDR-220ENST00000522900 KAT14Q9H8E8 782 aa21.93■■□□□ 1.1
SPIDR-220ENST00000522900 TAF6LQ9Y6J9 622 aa21.93■■□□□ 1.1
SPIDR-220ENST00000522900 TNKSO95271 1327 aa21.92■■□□□ 1.1
SPIDR-220ENST00000522900 SYNRGQ9UMZ2 1314 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms